Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20186
         (535 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9FMY7 Cluster: Genomic DNA, chromosome 5, P1 clone:MJB...    34   1.8  
UniRef50_Q9PBV1 Cluster: Putative uncharacterized protein; n=1; ...    33   4.1  
UniRef50_Q4AP83 Cluster: Putative uncharacterized protein; n=3; ...    33   4.1  
UniRef50_Q50L01 Cluster: Bitter taste receptor T2R1; n=2; Cebida...    32   7.2  
UniRef50_Q9TZG9 Cluster: F-box b protein protein 17; n=1; Caenor...    32   7.2  
UniRef50_Q9NYW7 Cluster: Taste receptor type 2 member 1; n=24; E...    32   7.2  
UniRef50_Q01747 Cluster: Anti-platelet protein precursor; n=1; H...    32   7.2  
UniRef50_Q176V2 Cluster: Pickpocket; n=3; Culicidae|Rep: Pickpoc...    32   9.5  

>UniRef50_Q9FMY7 Cluster: Genomic DNA, chromosome 5, P1 clone:MJB21;
           n=2; Arabidopsis thaliana|Rep: Genomic DNA, chromosome
           5, P1 clone:MJB21 - Arabidopsis thaliana (Mouse-ear
           cress)
          Length = 242

 Score = 34.3 bits (75), Expect = 1.8
 Identities = 24/59 (40%), Positives = 33/59 (55%)
 Frame = -1

Query: 454 EGRSTFSSTQLEENILQIHISQCHRNVLREHYIYPKSF*LFTSIVIIVLKLSSNQFKTI 278
           +G   F S+  EE+ L      CHRN  RE  I P++  + T  V+ VLK+SS QF+ I
Sbjct: 81  DGCGEFVSSTGEEDSLNCAACGCHRNFHREELI-PENGGV-TETVLEVLKISSCQFRRI 137


>UniRef50_Q9PBV1 Cluster: Putative uncharacterized protein; n=1;
           Xylella fastidiosa|Rep: Putative uncharacterized protein
           - Xylella fastidiosa
          Length = 433

 Score = 33.1 bits (72), Expect = 4.1
 Identities = 11/27 (40%), Positives = 20/27 (74%)
 Frame = +3

Query: 363 CSRRTLRWHWLICIWRIFSSNWVEEKV 443
           CSR  +  HWL+   R++SSNW+++++
Sbjct: 335 CSRGEVYHHWLLGRHRVYSSNWMDDQL 361


>UniRef50_Q4AP83 Cluster: Putative uncharacterized protein; n=3;
           Chlorobium/Pelodictyon group|Rep: Putative
           uncharacterized protein - Chlorobium phaeobacteroides
           BS1
          Length = 98

 Score = 33.1 bits (72), Expect = 4.1
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -3

Query: 335 IYFYSYNSLKTKFKSIQNYRGQCYSLNGILE 243
           +Y   +N+LK  F  + +YR  CY  NG+ E
Sbjct: 47  LYVNGWNNLKENFNKVASYRCMCYPDNGVFE 77


>UniRef50_Q50L01 Cluster: Bitter taste receptor T2R1; n=2;
           Cebidae|Rep: Bitter taste receptor T2R1 - Cebus apella
           (Brown-capped capuchin)
          Length = 251

 Score = 32.3 bits (70), Expect = 7.2
 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
 Frame = -3

Query: 362 LYISQVFLVIYFYSYNSLKTKFKSIQNYRGQCYSLNGILEVERWLSSWSG-FNTAEESNV 186
           L +S+ FL  + +  N +      +  Y   C  +  I E+E WL++W G F  A+ S+V
Sbjct: 21  LALSRTFLQFFIFYINLVVLFLMKLIMYPESCVIVMFINELELWLATWLGVFYCAKVSSV 80

Query: 185 SLRAFVS*KLSL 150
               F+  K+ +
Sbjct: 81  PHPLFIWLKMKI 92


>UniRef50_Q9TZG9 Cluster: F-box b protein protein 17; n=1;
           Caenorhabditis elegans|Rep: F-box b protein protein 17 -
           Caenorhabditis elegans
          Length = 276

 Score = 32.3 bits (70), Expect = 7.2
 Identities = 16/48 (33%), Positives = 29/48 (60%)
 Frame = -2

Query: 507 RGLWVHAFRNFRNVFEDRKGGQLFPLPSWRKIFSRYISASAIVMSFES 364
           +GL V    N  +  E+R+  +LFP P++ ++ + YI  S +V +FE+
Sbjct: 143 KGLNVRKLVNHDSRIENRQLLKLFPTPNYLRLSNDYICESILVQNFET 190


>UniRef50_Q9NYW7 Cluster: Taste receptor type 2 member 1; n=24;
           Eutheria|Rep: Taste receptor type 2 member 1 - Homo
           sapiens (Human)
          Length = 299

 Score = 32.3 bits (70), Expect = 7.2
 Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
 Frame = -3

Query: 362 LYISQVFLVIYFYSYNSLKTKFKSIQNYRGQCYSLNGILEVERWLSSWSG-FNTAEESNV 186
           L +S++FL ++ +  N +   F         C  L  I E+E WL++W G F  A+ ++V
Sbjct: 51  LAVSRIFLQLFIFYVNVIVIFFIEFIMCSANCAILLFINELELWLATWLGVFYCAKVASV 110

Query: 185 SLRAFVS*KLSL 150
               F+  K+ +
Sbjct: 111 RHPLFIWLKMRI 122


>UniRef50_Q01747 Cluster: Anti-platelet protein precursor; n=1;
           Haementeria officinalis|Rep: Anti-platelet protein
           precursor - Haementeria officinalis (Mexican leech)
          Length = 147

 Score = 32.3 bits (70), Expect = 7.2
 Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = -1

Query: 481 ELQKCFRRSEGRSTFSSTQLEE-NILQIHISQCHR 380
           E  +C+R +EG  T+SS Q ++ N++Q H+  C +
Sbjct: 113 ETNECYRNNEGDVTWSSLQYDQPNVVQWHLHACSK 147


>UniRef50_Q176V2 Cluster: Pickpocket; n=3; Culicidae|Rep: Pickpocket
           - Aedes aegypti (Yellowfever mosquito)
          Length = 481

 Score = 31.9 bits (69), Expect = 9.5
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -3

Query: 299 FKSIQNYRGQCYSLNGILEVERWLSSWSGFNTAEES 192
           FK IQ   G CY LN I  VE+   +W G     ++
Sbjct: 192 FKPIQTSMGSCYLLNSIQLVEKGGQNWLGMKVGRDT 227


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 550,835,743
Number of Sequences: 1657284
Number of extensions: 10844438
Number of successful extensions: 29019
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 28227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29016
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 33739557507
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)