Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20186
         (535 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   1.3  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   1.7  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    23   1.7  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    23   1.7  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   6.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   6.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   6.8  
AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    21   6.8  
AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450 ...    21   6.8  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 13/51 (25%), Positives = 26/51 (50%)
 Frame = -3

Query: 440 FFLYPVGGKYSPDTYQPVPS*CPSRALYISQVFLVIYFYSYNSLKTKFKSI 288
           FF+ P     +   Y P  + C +  L + ++  VIY+   ++LK+ + S+
Sbjct: 25  FFITPWYDFPTNQKYYPSLAKCYACLLMVVKILWVIYWLQDDALKSVYASL 75



 Score = 21.4 bits (43), Expect = 5.2
 Identities = 13/52 (25%), Positives = 26/52 (50%)
 Frame = +2

Query: 353 IYIVLSKDITMALADMYLENIFLQLGRGKS*PPFRSSKTFLKFLNAWTHNPR 508
           + +V+S D T+  A  +++  +    +      FR+S   +KF++   HN R
Sbjct: 684 LQMVISMDSTVEEAKTFVDRCYKMQEQFTL--NFRNSDELIKFISIAKHNVR 733


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 248  GFRLENNTAPYSFELI 295
            G+RL N+  PY FE +
Sbjct: 1034 GYRLANSDKPYLFETV 1049


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 376 HYDGTG*YVSGEYFPPT 426
           HY+G   Y+S E FP T
Sbjct: 442 HYNGDPNYISPEVFPNT 458


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 376 HYDGTG*YVSGEYFPPT 426
           HY+G   Y+S E FP T
Sbjct: 390 HYNGDPNYISPEVFPNT 406


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +2

Query: 245 RGFRLENNTAPYSFELI*T*F*DYYNYRSK 334
           RG+R+E + A  +F      F ++YN R +
Sbjct: 590 RGYRVEYSAASDAFTHCPEGFNEFYNQRRR 619


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +2

Query: 245 RGFRLENNTAPYSFELI*T*F*DYYNYRSK 334
           RG+R+E + A  +F      F ++YN R +
Sbjct: 823 RGYRVEYSAASDAFTHCPEGFNEFYNQRRR 852


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +2

Query: 245 RGFRLENNTAPYSFELI*T*F*DYYNYRSK 334
           RG+R+E + A  +F      F ++YN R +
Sbjct: 823 RGYRVEYSAASDAFTHCPEGFNEFYNQRRR 852


>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -1

Query: 421 EENILQIHISQCHRN 377
           E  +L IHI   HRN
Sbjct: 82  EGTVLHIHIFDLHRN 96


>AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 13/44 (29%), Positives = 17/44 (38%)
 Frame = -3

Query: 488 RSGTSEMFSKIGREVNFFLYPVGGKYSPDTYQPVPS*CPSRALY 357
           R GT           N  +YP   K+ PD +  +P  C  R  Y
Sbjct: 82  RKGTILQLHIYDLHYNPVIYPEPEKFDPDRF--LPENCDKRHPY 123


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,834
Number of Sequences: 336
Number of extensions: 2743
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12992348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)