Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20185
         (480 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY423354-1|AAQ94040.1|  112|Anopheles gambiae defender against p...    24   2.4  
CR954257-3|CAJ14154.1|  277|Anopheles gambiae predicted protein ...    23   5.4  
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    22   9.5  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    22   9.5  
AY578804-1|AAT07309.1|  133|Anopheles gambiae maverick protein.        22   9.5  

>AY423354-1|AAQ94040.1|  112|Anopheles gambiae defender against
           programmed cell death protein.
          Length = 112

 Score = 24.2 bits (50), Expect = 2.4
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +1

Query: 244 LSVMFSVIIQYVYCENKLLFLINGFKIKIFG*LSCF 351
           L ++ + I+Q+VYC     F  N F       +SCF
Sbjct: 31  LYILLTGIMQFVYCCLVGTFPFNSFLAGFISTVSCF 66


>CR954257-3|CAJ14154.1|  277|Anopheles gambiae predicted protein
           protein.
          Length = 277

 Score = 23.0 bits (47), Expect = 5.4
 Identities = 9/38 (23%), Positives = 18/38 (47%)
 Frame = +2

Query: 323 LKYLVNSHVSSNLLNYRDSTTFSIEIISPKYSCKKGLF 436
           + Y  N+H+   +   +   +    ++ P+   KKGLF
Sbjct: 57  ISYQPNAHLGEQITYSKTQGSVECTLVIPQAKNKKGLF 94


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = -1

Query: 339 LTKYFNFETINEKQKFIFTVHILNYH 262
           L  YFN          + TV +LNYH
Sbjct: 294 LGTYFNCIMFMVASSVVLTVVVLNYH 319


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = -1

Query: 339 LTKYFNFETINEKQKFIFTVHILNYH 262
           L  YFN          + TV +LNYH
Sbjct: 294 LGTYFNCIMFMVASSVVLTVVVLNYH 319


>AY578804-1|AAT07309.1|  133|Anopheles gambiae maverick protein.
          Length = 133

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +1

Query: 130 TQRCTTSKKRCC 165
           T  CT   KRCC
Sbjct: 23  TTACTAGNKRCC 34


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 369,182
Number of Sequences: 2352
Number of extensions: 5650
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 41863041
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)