Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20183
         (706 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            26   1.3  
CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein...    24   5.4  
Z81291-1|CAB03592.1|  209|Anopheles gambiae GSTD1-5 protein prot...    23   7.1  
AF071160-3|AAC79993.1|  209|Anopheles gambiae glutathione S-tran...    23   7.1  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    23   9.4  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 20/84 (23%), Positives = 39/84 (46%)
 Frame = +3

Query: 297  KNVILTGVKSVFLLDNEKLKQIDLYSQFLCPPDKIGVNRAEGSLERARGLNPMVDVTSHT 476
            K V L G      ++N K K++  YS+     +++   R   + +  + L P+    +HT
Sbjct: 1831 KAVQLPGGAVRVTIENAKGKKVAKYSKVGSYENRLSTWRYGSNDKLQQELPPIYHYRAHT 1890

Query: 477  KGVDELPDSFLRNLTSYVQQVSNK 548
              ++ +P  F+ N TS   Q+  +
Sbjct: 1891 STMENVP-FFVANYTSEQMQLQQQ 1913


>CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein
           protein.
          Length = 271

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -3

Query: 428 QRTLRSIYADLVRRTQKLG 372
           QRT  + Y +LVRRTQ  G
Sbjct: 3   QRTTMARYPELVRRTQGRG 21


>Z81291-1|CAB03592.1|  209|Anopheles gambiae GSTD1-5 protein
           protein.
          Length = 209

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = -1

Query: 445 KPRALSNEPSARFTPILSGGHRNWEYRSIC 356
           KP  L   P      ++  G   WE R+IC
Sbjct: 40  KPEFLKINPQHCIPTLVDNGFALWESRAIC 69


>AF071160-3|AAC79993.1|  209|Anopheles gambiae glutathione
           S-transferase protein.
          Length = 209

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = -1

Query: 445 KPRALSNEPSARFTPILSGGHRNWEYRSIC 356
           KP  L   P      ++  G   WE R+IC
Sbjct: 40  KPEFLKINPQHCIPTLVDNGFALWESRAIC 69


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -2

Query: 438 ELFPTNPPLDLRRSCQEDTEIGSTDR 361
           +LFPT+PP+    S    T + S  R
Sbjct: 462 DLFPTHPPVSWPVSSDAPTTVPSDSR 487


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 679,359
Number of Sequences: 2352
Number of extensions: 12676
Number of successful extensions: 23
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71922660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)