Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20181X
         (511 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.        26   0.85 
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    24   3.4  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    23   4.5  
DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    23   6.0  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   7.9  

>DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.
          Length = 494

 Score = 25.8 bits (54), Expect = 0.85
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = -2

Query: 144 QPAHCFWNKFLRLQLDLRNHIVDNLVSHLKLVGHLYVVTKMEMHD 10
           QPA+       RLQ  L   ++D+ +S +KL   +  + KM + +
Sbjct: 347 QPANSSRTAIRRLQATLTGKMLDSWISQMKLQSTMVRLPKMHLRN 391


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.8 bits (49), Expect = 3.4
 Identities = 14/47 (29%), Positives = 19/47 (40%)
 Frame = +3

Query: 6   SHRASPS*SQHISDLQALDGSQGYQQCDYGGQAAAAEIYSKSNGRVA 146
           S R S   S H     +   S  +QQ  Y  ++ A  I   S  RV+
Sbjct: 104 SERESYYSSSHYQSSSSSSSSSSFQQSSYESESGAGSIVQISPQRVS 150


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
 Frame = +2

Query: 356 LPIPEN---SELYEDAVAQTSNQQFEDAGFNSHNHASSINSDYSGQSKSSRNS 505
           LP PEN    E   D+  + SNQQ  + G ++    ++ +S  S ++ S RN+
Sbjct: 64  LPRPENFVEPETEPDS-NKCSNQQLANTGSSNTQLQAAASSSSSKKNSSRRNA 115


>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 23.0 bits (47), Expect = 6.0
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -3

Query: 308 VLCHVFPIAYDSCMLIGNFGLMNTSINVNNRFIV 207
           +LCH  P+A    + I    L  TSI ++  F++
Sbjct: 166 LLCHTVPLAQGCSVYISTLTL--TSIAIDRFFVI 197


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 16/70 (22%), Positives = 29/70 (41%)
 Frame = +2

Query: 281  KQWEKHDTKPLIISVPNSNYPKNNDLPIPENSELYEDAVAQTSNQQFEDAGFNSHNHASS 460
            +Q+     KPL  + P    PK  +L       +  DA+   SN+          + ASS
Sbjct: 3036 EQFSDFIVKPLSKASPKLRLPKPPNLARMLRFRIRSDAIRIGSNESIVVPNHMERSSASS 3095

Query: 461  INSDYSGQSK 490
            +++ ++   K
Sbjct: 3096 LHNMFNNWIK 3105


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 447,355
Number of Sequences: 2352
Number of extensions: 8378
Number of successful extensions: 22
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46091631
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)