Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20180
(477 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC020548-1|AAH20548.1| 860|Homo sapiens transforming growth fac... 31 1.6
AF022795-1|AAC16903.1| 860|Homo sapiens TGF beta receptor assoc... 31 1.6
AC012360-3|AAY15010.1| 860|Homo sapiens unknown protein. 31 1.6
AL359963-2|CAH71092.1| 900|Homo sapiens erythrocyte membrane pr... 29 6.3
AL358815-2|CAI15129.1| 900|Homo sapiens erythrocyte membrane pr... 29 6.3
AF153416-1|AAG43366.1| 913|Homo sapiens FERM-containing protein... 29 6.3
AB209187-1|BAD92424.1| 603|Homo sapiens erythrocyte membrane pr... 29 6.3
L34219-1|AAA65123.1| 317|Homo sapiens retinaldehyde-binding pro... 29 8.3
J04213-1|AAA60251.1| 317|Homo sapiens RLBP1 protein. 29 8.3
BC004199-1|AAH04199.1| 317|Homo sapiens retinaldehyde binding p... 29 8.3
>BC020548-1|AAH20548.1| 860|Homo sapiens transforming growth
factor, beta receptor associated protein 1 protein.
Length = 860
Score = 31.5 bits (68), Expect = 1.6
Identities = 23/70 (32%), Positives = 33/70 (47%)
Frame = +3
Query: 105 NVINDRPKMPFVEYKLYENIFIETNLQSADYDAVILILYPEELNVPLPRHSGASSTESGN 284
++IN K P K E++ I+ LQ +Y + +LY EE V L R S +S +
Sbjct: 578 DIINCLKKYPKALVKYLEHLVIDKRLQKEEYHTHLAVLYLEE--VLLQRAS--ASGKGAE 633
Query: 285 LTSTSTSRRR 314
T T RR
Sbjct: 634 ATETQAKLRR 643
>AF022795-1|AAC16903.1| 860|Homo sapiens TGF beta receptor
associated protein-1 protein.
Length = 860
Score = 31.5 bits (68), Expect = 1.6
Identities = 23/70 (32%), Positives = 33/70 (47%)
Frame = +3
Query: 105 NVINDRPKMPFVEYKLYENIFIETNLQSADYDAVILILYPEELNVPLPRHSGASSTESGN 284
++IN K P K E++ I+ LQ +Y + +LY EE V L R S +S +
Sbjct: 578 DIINCLKKYPKALVKYLEHLVIDKRLQKEEYHTHLAVLYLEE--VLLQRAS--ASGKGAE 633
Query: 285 LTSTSTSRRR 314
T T RR
Sbjct: 634 ATETQAKLRR 643
>AC012360-3|AAY15010.1| 860|Homo sapiens unknown protein.
Length = 860
Score = 31.5 bits (68), Expect = 1.6
Identities = 23/70 (32%), Positives = 33/70 (47%)
Frame = +3
Query: 105 NVINDRPKMPFVEYKLYENIFIETNLQSADYDAVILILYPEELNVPLPRHSGASSTESGN 284
++IN K P K E++ I+ LQ +Y + +LY EE V L R S +S +
Sbjct: 578 DIINCLKKYPKALVKYLEHLVIDKRLQKEEYHTHLAVLYLEE--VLLQRAS--ASGKGAE 633
Query: 285 LTSTSTSRRR 314
T T RR
Sbjct: 634 ATETQAKLRR 643
>AL359963-2|CAH71092.1| 900|Homo sapiens erythrocyte membrane
protein band 4.1 like 4B protein.
Length = 900
Score = 29.5 bits (63), Expect = 6.3
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -1
Query: 285 SFPIPSTKLPNVSAMAR*VPRGKGLRSPHRNQPTE 181
S P+PS K+ NVS+ + GKGL SP P++
Sbjct: 713 SVPLPSPKVQNVSSPHK--SEGKGLLSPGAKSPSD 745
>AL358815-2|CAI15129.1| 900|Homo sapiens erythrocyte membrane
protein band 4.1 like 4B protein.
Length = 900
Score = 29.5 bits (63), Expect = 6.3
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -1
Query: 285 SFPIPSTKLPNVSAMAR*VPRGKGLRSPHRNQPTE 181
S P+PS K+ NVS+ + GKGL SP P++
Sbjct: 713 SVPLPSPKVQNVSSPHK--SEGKGLLSPGAKSPSD 745
>AF153416-1|AAG43366.1| 913|Homo sapiens FERM-containing protein
protein.
Length = 913
Score = 29.5 bits (63), Expect = 6.3
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -1
Query: 285 SFPIPSTKLPNVSAMAR*VPRGKGLRSPHRNQPTE 181
S P+PS K+ NVS+ + GKGL SP P++
Sbjct: 699 SVPLPSPKVQNVSSPHK--SEGKGLLSPGAKSPSD 731
>AB209187-1|BAD92424.1| 603|Homo sapiens erythrocyte membrane
protein band 4.1 like 4B variant protein.
Length = 603
Score = 29.5 bits (63), Expect = 6.3
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -1
Query: 285 SFPIPSTKLPNVSAMAR*VPRGKGLRSPHRNQPTE 181
S P+PS K+ NVS+ + GKGL SP P++
Sbjct: 416 SVPLPSPKVQNVSSPHK--SEGKGLLSPGAKSPSD 448
>L34219-1|AAA65123.1| 317|Homo sapiens retinaldehyde-binding
protein protein.
Length = 317
Score = 29.1 bits (62), Expect = 8.3
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = +3
Query: 132 PFVEYKLYENIFIETNLQSADYDAVILILYPEELNVPLPRHSGASSTE 275
PF++ KL E +F+ + S Y + + P + LP++ G + E
Sbjct: 256 PFLKSKLLERVFVHGDDLSGFYQEIDENILPSDFGGTLPKYDGKAVAE 303
>J04213-1|AAA60251.1| 317|Homo sapiens RLBP1 protein.
Length = 317
Score = 29.1 bits (62), Expect = 8.3
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = +3
Query: 132 PFVEYKLYENIFIETNLQSADYDAVILILYPEELNVPLPRHSGASSTE 275
PF++ KL E +F+ + S Y + + P + LP++ G + E
Sbjct: 256 PFLKSKLLERVFVHGDDLSGFYQEIDENILPSDFGGTLPKYDGKAVAE 303
>BC004199-1|AAH04199.1| 317|Homo sapiens retinaldehyde binding
protein 1 protein.
Length = 317
Score = 29.1 bits (62), Expect = 8.3
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = +3
Query: 132 PFVEYKLYENIFIETNLQSADYDAVILILYPEELNVPLPRHSGASSTE 275
PF++ KL E +F+ + S Y + + P + LP++ G + E
Sbjct: 256 PFLKSKLLERVFVHGDDLSGFYQEIDENILPSDFGGTLPKYDGKAVAE 303
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,524,283
Number of Sequences: 237096
Number of extensions: 1450010
Number of successful extensions: 3098
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3098
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4213781852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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