Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20179
(522 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit Git... 62 5e-11
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 46 5e-06
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 45 8e-06
SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyce... 43 2e-05
SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces po... 42 6e-05
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 38 7e-04
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 38 0.001
SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1 |Schizosaccharo... 37 0.002
SPCC1672.07 |||U3 snoRNP-associated protein Utp21 |Schizosacchar... 37 0.002
SPAC31A2.14 |||WD repeat protein, human WRDR48 family|Schizosacc... 36 0.005
SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosacchar... 35 0.006
SPAC4D7.05 |sum1|tif34|translation initiation factor eIF3i|Schiz... 35 0.008
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 35 0.008
SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein Mfr1|Schizosa... 34 0.011
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 34 0.011
SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces ... 34 0.011
SPAC25H1.08c |||ribosome biogenesis protein Sqt1|Schizosaccharom... 34 0.011
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 33 0.020
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 33 0.020
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 33 0.020
SPBC713.05 |||WD repeat protein, human MAPK organizer 1 |Schizos... 33 0.034
SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 33 0.034
SPAC458.06 |||phosphoinositide binding protein|Schizosaccharomyc... 33 0.034
SPAC4F8.11 |||WD repeat protein, human WDR24 family|Schizosaccha... 32 0.045
SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces... 32 0.045
SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S... 32 0.045
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 32 0.045
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 31 0.14
SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces po... 30 0.18
SPBC27B12.05 |||WD repeat protein|Schizosaccharomyces pombe|chr ... 29 0.32
SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces pomb... 29 0.32
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 28 0.97
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 28 0.97
SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces pombe... 28 0.97
SPBC16A3.05c |rae1||RNA export factor Rae1|Schizosaccharomyces p... 27 1.3
SPBC1A4.07c |||U3 snoRNP-associated protein Sof1|Schizosaccharom... 27 1.3
SPCC126.01c ||SPCC576.18c|conserved fungal protein|Schizosacchar... 27 1.3
SPAC806.02c |||Par A family ATPase iron cluster assembly protein... 27 1.7
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 27 1.7
SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr 2|||... 27 1.7
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 27 2.2
SPAC343.17c |||WD repeat protein, human WDR70 family|Schizosacch... 27 2.2
SPCC1235.09 |||histone deacetylase complex subunit|Schizosacchar... 26 3.0
SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomy... 26 3.9
SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces ... 25 5.2
SPCC18.13 |||tRNA |Schizosaccharomyces pombe|chr 3|||Manual 25 6.8
SPAC17D4.01 |pex7|SPAC1834.12|peroxin-7 |Schizosaccharomyces pom... 25 6.8
SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|c... 25 9.0
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 25 9.0
>SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit
Git5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 305
Score = 62.1 bits (144), Expect = 5e-11
Identities = 24/50 (48%), Positives = 34/50 (68%)
Frame = +2
Query: 8 DFNCNVWDSMKSERAGILAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN 157
D C VWDS+ S+ L GH+NR+S L +T +G +ATGSWD +R+W+
Sbjct: 253 DKTCEVWDSISSKTITSLTGHENRISSLALTSDGTMLATGSWDECVRLWS 302
Score = 29.5 bits (63), Expect = 0.32
Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +2
Query: 8 DFNCNVWDSMKSERAGILAGHDNRVSRLG-VTENGMAVATGSWDSFLRIWN 157
D C WD +++ +L GH+ + L + N TG D ++W+
Sbjct: 126 DKTCMFWDIEQAKAISVLKGHEMDIVSLDFLPSNPNLFVTGGCDKLAKLWD 176
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 45.6 bits (103), Expect = 5e-06
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = +2
Query: 5 DDFNCNVWDSMKSERAGILAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN 157
D F +W + LAGH+ VS L +G +A+GSWD +RIW+
Sbjct: 445 DSFEIFMWSVQTGQLLETLAGHEGPVSSLSFNSSGSLLASGSWDKTVRIWD 495
Score = 24.6 bits (51), Expect = 9.0
Identities = 10/45 (22%), Positives = 21/45 (46%)
Frame = +2
Query: 23 VWDSMKSERAGILAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN 157
VW+ H + +S L + +G + TG+ D +++W+
Sbjct: 323 VWEWQSESYVLKQQSHYDALSTLQYSSDGQRIITGADDGKIKVWD 367
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 44.8 bits (101), Expect = 8e-06
Identities = 20/51 (39%), Positives = 25/51 (49%)
Frame = +2
Query: 5 DDFNCNVWDSMKSERAGILAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN 157
DD +WD K L GH N VS + G + +GSWD +RIWN
Sbjct: 116 DDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWN 166
Score = 30.7 bits (66), Expect = 0.14
Identities = 12/50 (24%), Positives = 22/50 (44%)
Frame = +2
Query: 8 DFNCNVWDSMKSERAGILAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN 157
D +W+ +L H + + ++ +G AT S+D RIW+
Sbjct: 159 DETVRIWNLQDGTCLRMLPAHSEPIISVSISADGTLCATASYDGMARIWD 208
Score = 28.7 bits (61), Expect = 0.56
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 59 LAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN 157
L GH+ V+ + V+ N +AT S D ++IW+
Sbjct: 50 LFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWS 82
Score = 25.8 bits (54), Expect = 3.9
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +2
Query: 71 DNRVSRLGVTENGMAVATGSWDSFLRIWN*TSHTNKH 181
D S L VT G + T D ++R+W + +KH
Sbjct: 337 DPETSLLNVTSLGPFIITSGTDPYVRVWAPSLLLSKH 373
Score = 25.4 bits (53), Expect = 5.2
Identities = 12/50 (24%), Positives = 22/50 (44%)
Frame = +2
Query: 8 DFNCNVWDSMKSERAGILAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN 157
D +W ++ L GH +S++ +A+ S D +RIW+
Sbjct: 75 DGTIKIWSALTFRLECTLFGHYRGISQVKWATGSKYLASASDDKTIRIWD 124
>SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 473
Score = 43.2 bits (97), Expect = 2e-05
Identities = 24/75 (32%), Positives = 37/75 (49%)
Frame = +2
Query: 8 DFNCNVWDSMKSERAGILAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN*TSHTNKHLN 187
D VWD + +L+GH + V+ L V E V TGS DS +R+W+ + K L
Sbjct: 268 DAVARVWDMRTRQNVHVLSGHKSTVASLAVQEFDPQVVTGSMDSTIRLWDLAA--GKTLT 325
Query: 188 THPNICRMISQTSIH 232
T + + + S+H
Sbjct: 326 TLTHHKKTVRALSLH 340
Score = 24.6 bits (51), Expect = 9.0
Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +2
Query: 56 ILAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN*TSHTNK-HLNTHPNICRMISQTSIH 232
+++GH V + V TG+ D ++IW+ S K L H R ++ + H
Sbjct: 158 VISGHLGWVRCVDVEPGNQWFCTGAGDRTIKIWDLASGVLKLTLTGHIATVRGLAVSPRH 217
Query: 233 LYMY 244
Y++
Sbjct: 218 PYLF 221
>SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 556
Score = 41.9 bits (94), Expect = 6e-05
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +2
Query: 23 VWDSMKSERAGILAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN*TSHTNKH 181
+W+ R G L GH +RV L ++ NG + TG+ D LR W +KH
Sbjct: 488 LWNYPSVSRVGTLKGHTDRVLYLAMSPNGENIVTGAADETLRFWKLFDSKSKH 540
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 38.3 bits (85), Expect = 7e-04
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +2
Query: 5 DDFNCNVWDSMKSERAGI-LAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN*TSHTNKH 181
DD +WD KS + + GH V+ + +G +AT S+DS +R+W+ T K
Sbjct: 366 DDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLWD--GKTGKF 423
Query: 182 LNT 190
L T
Sbjct: 424 LAT 426
Score = 37.5 bits (83), Expect = 0.001
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +2
Query: 8 DFNCNVWDSMKSERAGILAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN 157
DF +WD + GH N VS + + +ATGS D+ +R W+
Sbjct: 156 DFTARLWDCDTQTPIATMKGHTNWVSCVAWAPDASIIATGSMDNTIRFWD 205
Score = 35.1 bits (77), Expect = 0.006
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +2
Query: 8 DFNCNVWDSMKSERAGILAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN 157
D VWD + L GH+++V + + +G VA+G D +RIW+
Sbjct: 452 DTTLKVWDVRSKKMKFDLPGHEDQVFAVDWSPDGQRVASGGADKAVRIWS 501
Score = 26.2 bits (55), Expect = 3.0
Identities = 11/50 (22%), Positives = 23/50 (46%)
Frame = +2
Query: 8 DFNCNVWDSMKSERAGILAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN 157
D + +WD + L GH V + + + + + S D+ L++W+
Sbjct: 410 DSSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWD 459
Score = 25.0 bits (52), Expect = 6.8
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +2
Query: 8 DFNCNVWDSMKSERAGILAGHDNRVSRLGVTENGMAVATGSWD 136
D +WD+ + IL GH RV+ L ++ + + +G++D
Sbjct: 289 DKTIRIWDAKDGKCLHILKGHAARVNHLSLSTEHV-LRSGAYD 330
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 37.5 bits (83), Expect = 0.001
Identities = 20/61 (32%), Positives = 33/61 (54%)
Frame = +2
Query: 53 GILAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN*TSHTNKHLNTHPNICRMISQTSIH 232
G+L GH + V L +E+G+ +ATG+ D+ +R+WN N + H S T++
Sbjct: 358 GVLEGHTDIVLTLDSSEDGVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVA 417
Query: 233 L 235
L
Sbjct: 418 L 418
Score = 37.5 bits (83), Expect = 0.001
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = +2
Query: 8 DFNCNVWDSMKSERAGILAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN 157
D +WDS E G+L GH V +A+GS D +RIWN
Sbjct: 486 DKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIRIWN 535
Score = 34.3 bits (75), Expect = 0.011
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +2
Query: 5 DDFNCNVWDSMKSERAGILAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN 157
DD +WD S + GH + + L G + +GS D +++WN
Sbjct: 167 DDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWN 217
Score = 28.3 bits (60), Expect = 0.73
Identities = 9/33 (27%), Positives = 21/33 (63%)
Frame = +2
Query: 59 LAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN 157
+ HD V+ + V+++G +A+ S D +++W+
Sbjct: 461 IKAHDRDVNAIQVSKDGRIIASASQDKTIKLWD 493
Score = 26.2 bits (55), Expect = 3.0
Identities = 11/53 (20%), Positives = 23/53 (43%)
Frame = +2
Query: 8 DFNCNVWDSMKSERAGILAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN*TS 166
D +W+ + L GH + +L G V + + D +++W+ +S
Sbjct: 528 DRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSS 580
>SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 651
Score = 37.1 bits (82), Expect = 0.002
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +2
Query: 8 DFNCNVWDSMKSERAGILAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN 157
D VWD G L GH + VS L + ++ +ATGS D+ +R+WN
Sbjct: 353 DKTVKVWDMAGVVYLGSLKGHSDYVSCLAIQDS--FIATGSMDTTVRLWN 400
>SPCC1672.07 |||U3 snoRNP-associated protein Utp21
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 902
Score = 37.1 bits (82), Expect = 0.002
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +2
Query: 5 DDFNCNVWDSMKSERAGILAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN-*TSHTNKH 181
DDF + D + L GH NR++ ++ G + T S D +R W+ T H
Sbjct: 550 DDFGIRIVDVQTRKIVRELWGHSNRLTSFDFSDTGRWLVTASLDGTIRTWDLPTGHLIDS 609
Query: 182 LNTHPNICRMIS 217
++T P++C ++
Sbjct: 610 IST-PSVCTSLT 620
>SPAC31A2.14 |||WD repeat protein, human WRDR48
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 962
Score = 35.5 bits (78), Expect = 0.005
Identities = 12/45 (26%), Positives = 27/45 (60%)
Frame = +2
Query: 23 VWDSMKSERAGILAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN 157
+WD + +R L GH + V + ++++G + T S D+ +++W+
Sbjct: 200 LWDCVSKKRITDLVGHTDNVRDILISDDGRTILTASSDATIKLWS 244
>SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein
Pop2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 703
Score = 35.1 bits (77), Expect = 0.006
Identities = 25/70 (35%), Positives = 35/70 (50%)
Frame = +2
Query: 8 DFNCNVWDSMKSERAGILAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN*TSHTNKHLN 187
D + VWD +L GHD V+ L V +N + +GS DS +RIW+ +T K L
Sbjct: 568 DKSIRVWDLSTGTCKYVLEGHDAFVTLLNVFQN--RLISGSADSTIRIWD--LNTGKPLM 623
Query: 188 THPNICRMIS 217
P+ IS
Sbjct: 624 VLPSNSGYIS 633
Score = 25.4 bits (53), Expect = 5.2
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 59 LAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN-*TSHTNKHLNTH 193
L GH + V ++ G + +GS+DS +RIW T HL H
Sbjct: 503 LIGHTDSVRT--ISGYGDILVSGSYDSSIRIWRVSTGECLYHLRGH 546
>SPAC4D7.05 |sum1|tif34|translation initiation factor
eIF3i|Schizosaccharomyces pombe|chr 1|||Manual
Length = 328
Score = 34.7 bits (76), Expect = 0.008
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +2
Query: 20 NVWDSMKSERAGILAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN 157
NVW S ER G GH + + ++ + +G+ D+ +R+W+
Sbjct: 35 NVWFSHNGERLGTYEGHTGAIWTCDINKSSTLMVSGAADNTMRLWD 80
Score = 24.6 bits (51), Expect = 9.0
Identities = 11/46 (23%), Positives = 24/46 (52%)
Frame = +2
Query: 56 ILAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN*TSHTNKHLNTH 193
IL GH+ ++++ +G + + + D + +W SH + L T+
Sbjct: 5 ILQGHERPLTQIKYNHDGDLLFSCAKDKVINVW--FSHNGERLGTY 48
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 34.7 bits (76), Expect = 0.008
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +2
Query: 59 LAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN 157
L GH+N V + V+ NG ATGS D RIW+
Sbjct: 550 LQGHNNSVISVAVSPNGHCFATGSGDLRARIWS 582
Score = 33.1 bits (72), Expect = 0.026
Identities = 12/51 (23%), Positives = 26/51 (50%)
Frame = +2
Query: 5 DDFNCNVWDSMKSERAGILAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN 157
+D +WD + +L GH+ + L +++G + +GS D + +W+
Sbjct: 354 EDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWD 404
Score = 25.8 bits (54), Expect = 3.9
Identities = 9/32 (28%), Positives = 19/32 (59%)
Frame = +2
Query: 59 LAGHDNRVSRLGVTENGMAVATGSWDSFLRIW 154
L GH+ V + + +G + +GS D+ +++W
Sbjct: 454 LHGHEESVYSVAFSPDGKYLVSGSLDNTIKLW 485
Score = 25.0 bits (52), Expect = 6.8
Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 65 GHDNRVSRLGVTENGMAVATGSWDSFLRIWN*TS-HTNKHLNTHPN 199
GH + + + V+ +G + +GS D ++ W+ S H+ L H N
Sbjct: 510 GHKDFILSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQLTLQGHNN 555
>SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein
Mfr1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 34.3 bits (75), Expect = 0.011
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +2
Query: 20 NVWDSMKSERAGILAGHDNRVSRLGVTENGMAVATGSWDSFLRIW 154
++W + L H NRV L ++ +G ++ TG+ D LR W
Sbjct: 362 SLWKYPSLKNIANLTAHTNRVLYLSMSPDGQSIVTGAGDETLRFW 406
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 34.3 bits (75), Expect = 0.011
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = +2
Query: 5 DDFNCNVWDSMKSERAGILAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN 157
+D +WD + + +GH+ + L + NG + +GS D R+W+
Sbjct: 380 EDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWD 430
Score = 29.1 bits (62), Expect = 0.42
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +2
Query: 8 DFNCNVWDSMKSERAGILAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN 157
D + WD + GH N V + + +G A+GS D RIW+
Sbjct: 559 DRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASGSGDLRARIWS 608
>SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 314
Score = 34.3 bits (75), Expect = 0.011
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +2
Query: 8 DFNCNVWDSMKSERAGILAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN 157
D +WD K E GH + V + ++ + V +GS D ++IWN
Sbjct: 84 DKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTIKIWN 133
Score = 27.5 bits (58), Expect = 1.3
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = +2
Query: 23 VWDSMKSERAGILAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN*TSHTNKH-LNTHPN 199
VWD GH VS + ++ +G A+G D L +W+ T+ + L N
Sbjct: 176 VWDLETFSLRTSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWDLNESTHLYSLEAKAN 235
Query: 200 ICRMI 214
I ++
Sbjct: 236 INALV 240
Score = 27.1 bits (57), Expect = 1.7
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +2
Query: 59 LAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN 157
L GH + VS ++ + + SWD +R+W+
Sbjct: 59 LTGHSHFVSDCALSFDSHYALSASWDKTIRLWD 91
>SPAC25H1.08c |||ribosome biogenesis protein
Sqt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 399
Score = 34.3 bits (75), Expect = 0.011
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 23 VWDSMKSERAGILAGHDNRVSRLGVTENGMAVATGSWDSFLRIW 154
+WD E+ L GH + + + + +G +ATG DS +R+W
Sbjct: 88 IWDITTGEQICQLTGHKDSIVAIDWSFDGTYIATGGMDSQVRLW 131
Score = 30.3 bits (65), Expect = 0.18
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +2
Query: 26 WDSMKSERAGILAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN 157
WD + G GH + + +T +G V TGS D+ L +++
Sbjct: 353 WDVRSGQLLGEYTGHQEPILCMAITPDGKRVVTGSDDTELLVFD 396
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 33.5 bits (73), Expect = 0.020
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = +2
Query: 8 DFNCNVWDSMKSERAGILAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN-*TSHTNKHL 184
D +WD + + GH N V + N +ATGS D R+W+ T T +
Sbjct: 466 DQTARLWDVEHAAPLRVFVGHQNDVDCVSFHPNAAYLATGSSDHTTRMWDVRTGGTVRVF 525
Query: 185 NTH 193
N H
Sbjct: 526 NAH 528
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 33.5 bits (73), Expect = 0.020
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +2
Query: 8 DFNCNVWDSMKSERAGILAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN 157
D +W+ E L GH N VS++ +N + A+ D+ LR+W+
Sbjct: 638 DAKIRIWNLESGELLQTLHGHSNLVSQVTFNQNILVSASAPPDTSLRVWD 687
Score = 28.7 bits (61), Expect = 0.56
Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Frame = +2
Query: 8 DFNCNVWDSMKSERAGILAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN*TS-HTNKHL 184
D VW + +L GH RV + + + + D+ +RIWN S + L
Sbjct: 596 DGTLRVWKASTGVCLHVLRGHVGRVYSVTINPSRQQCISAGTDAKIRIWNLESGELLQTL 655
Query: 185 NTHPNICRMIS 217
+ H N+ ++
Sbjct: 656 HGHSNLVSQVT 666
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 33.5 bits (73), Expect = 0.020
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +2
Query: 41 SERAGILAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN*TSHTNKHLNTHPN 199
+ + G L GH + V L +G+ +A+G D+ ++IW+ S K T+ N
Sbjct: 294 NHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHN 346
Score = 26.6 bits (56), Expect = 2.2
Identities = 13/53 (24%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +2
Query: 2 YDDFNCNVWDSMKS--ERAGILAGHDNRVSRLGVTENGMAVATGSWDSFLRIW 154
+ D N ++W S + + HD RV ++ +G ++T + D L+ W
Sbjct: 411 FPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFW 463
>SPBC713.05 |||WD repeat protein, human MAPK organizer 1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 32.7 bits (71), Expect = 0.034
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +2
Query: 23 VWDSMKSERAGILAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN*TSHT 172
VWD + L GH +++ + E+ +A+GS+DS +R+W+ S++
Sbjct: 82 VWDVNTGKVDRRLGGHLAQINTIRYNEDSSILASGSFDSKVRLWDCRSNS 131
>SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 32.7 bits (71), Expect = 0.034
Identities = 11/45 (24%), Positives = 29/45 (64%)
Frame = +2
Query: 23 VWDSMKSERAGILAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN 157
+WD + + +L GH + ++ L ++++G ++ + S D+ +RI++
Sbjct: 203 IWDLRNNHCSHVLKGHKDIITSLAISKDGSSLLSNSMDNTVRIFD 247
>SPAC458.06 |||phosphoinositide binding protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 364
Score = 32.7 bits (71), Expect = 0.034
Identities = 13/35 (37%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = +2
Query: 56 ILAGHDNRVSRLGVTENGMAVATGSWD-SFLRIWN 157
I+ HD+ +S LG+++ G +A+ S + + +RIWN
Sbjct: 170 IVPAHDSEISCLGISKTGSKIASSSTNGTLIRIWN 204
>SPAC4F8.11 |||WD repeat protein, human WDR24
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 846
Score = 32.3 bits (70), Expect = 0.045
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +2
Query: 59 LAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN*TSHTNKHLNTHPNI 202
LA H+ V + + NG+ +A+ D +RIW+ TS+ K L T N+
Sbjct: 217 LAAHNGVVLCVNYSPNGVFLASCGRDKTIRIWDSTSNKKKSLITINNV 264
>SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 796
Score = 32.3 bits (70), Expect = 0.045
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +2
Query: 5 DDFNCNVWDSMKSERAGILAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN*TSHT 172
DD VWD IL GH N VS + +GS D ++IW+ S++
Sbjct: 206 DDNLIKVWDYQTKACVRILEGHTNNVSFAFFHSKFPIIISGSEDGTVKIWHTLSYS 261
>SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 32.3 bits (70), Expect = 0.045
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +2
Query: 8 DFNCNVWDSMKSERAGILAGHDNRVSRLGVTENGM--AVATGSWDSFLRIWN 157
D +WD K A + H + VS + E+G+ +AT +D +++WN
Sbjct: 370 DDTVKIWDLRKVSLAHTIPAHSSLVSDVRYIESGVNRFIATSGYDGCVKLWN 421
Score = 30.3 bits (65), Expect = 0.18
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +2
Query: 38 KSERAGILAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN 157
K+E G G + ++ + + NG A+GSW +++WN
Sbjct: 161 KAELMGSQIGGERPIAIVRFSNNGNHFASGSWGGQVKVWN 200
Score = 27.5 bits (58), Expect = 1.3
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +2
Query: 23 VWDSMKSERAGILAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN 157
+W + +S L GH RV R+ +G + + S+D+ R+W+
Sbjct: 249 LWKASQSTPLLRLEGHLARVGRVAFHPSGDYLVSASFDTTWRLWD 293
Score = 25.8 bits (54), Expect = 3.9
Identities = 12/50 (24%), Positives = 21/50 (42%)
Frame = +2
Query: 8 DFNCNVWDSMKSERAGILAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN 157
D +WD + GH + + +G V++G D+ RIW+
Sbjct: 286 DTTWRLWDVHTGVELLMQEGHSEGIFSIACQPDGSLVSSGGNDAIGRIWD 335
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 32.3 bits (70), Expect = 0.045
Identities = 10/50 (20%), Positives = 23/50 (46%)
Frame = +2
Query: 8 DFNCNVWDSMKSERAGILAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN 157
D C +WD + + GH V+ + + +G +A+ + + +W+
Sbjct: 484 DKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWD 533
Score = 26.2 bits (55), Expect = 3.0
Identities = 10/46 (21%), Positives = 19/46 (41%)
Frame = +2
Query: 20 NVWDSMKSERAGILAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN 157
++WD R + GH + L + + +G D +R W+
Sbjct: 530 HLWDIGTGRRIKTMRGHRGNIYSLSFSRESTVLVSGGSDCTVRAWD 575
Score = 25.8 bits (54), Expect = 3.9
Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Frame = +2
Query: 8 DFNCNVWDSMKSERAGILAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN-*TSHTNKHL 184
D +W + AGH + V + N V TGS D R+W+ H+ +
Sbjct: 442 DQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVF 501
Query: 185 NTH 193
N H
Sbjct: 502 NGH 504
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 30.7 bits (66), Expect = 0.14
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +2
Query: 47 RAGILAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN 157
R +L+GH + V L + N +A+GS+D+ +R+WN
Sbjct: 265 RQVVLSGHSDGVMCLQLVRN--ILASGSYDATIRLWN 299
Score = 28.3 bits (60), Expect = 0.73
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +2
Query: 8 DFNCNVWDSMKSERAGILAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN 157
D +W+ SE IL GH + V L +T + + +GS D +++W+
Sbjct: 332 DKTIRIWNYRTSECISILHGHTDSV--LCLTFDSTLLVSGSADCTVKLWH 379
Score = 27.9 bits (59), Expect = 0.97
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +2
Query: 8 DFNCNVWDSMKSERAGILAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN*TSHTNKH 181
D +W +R L GH V+ + + + V +GS DS ++IW+ ++T H
Sbjct: 372 DCTVKLWHFSGGKRI-TLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLH 428
>SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 30.3 bits (65), Expect = 0.18
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 59 LAGHDNRVSRLGVTENGMAVATGSWDSFLRIW 154
L GH++ + N + TGSWDS R+W
Sbjct: 94 LFGHESNICSASAL-NSETIITGSWDSTARVW 124
>SPBC27B12.05 |||WD repeat protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 391
Score = 29.5 bits (63), Expect = 0.32
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +2
Query: 56 ILAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN*TS 166
+L GH++ + + +G + +GS D L+IW+ TS
Sbjct: 96 VLEGHEHNIPCITFNSSGTLLLSGSIDRSLQIWDITS 132
>SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 29.5 bits (63), Expect = 0.32
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 56 ILAGHDNRVSRLGVTENGMAVATGSWDSFLRIW 154
+ GH RV L V +G +A+G D LRIW
Sbjct: 374 VFIGHKGRVRCLSVHVSGNWLASGGDDGVLRIW 406
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 27.9 bits (59), Expect = 0.97
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +2
Query: 2 YDDFNCNVWDSMKSERAGILAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN*TSHT 172
Y D + +W E L GH + V+ + + G +A+GS D+ + +W+ + T
Sbjct: 83 YADGSIRLWKD--GELLITLNGHKSAVTTMDFDKMGTRLASGSMDTDIIVWDIVAET 137
Score = 27.5 bits (58), Expect = 1.3
Identities = 14/52 (26%), Positives = 22/52 (42%)
Frame = +2
Query: 2 YDDFNCNVWDSMKSERAGILAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN 157
Y V+D S + HD + L V +G AT S D +++W+
Sbjct: 454 YKSGELEVYDIASSSLIERIQAHDGAIWDLAVGHDGTYFATASADHTVKLWS 505
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 27.9 bits (59), Expect = 0.97
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +2
Query: 65 GHDNRVSRLGVTENGMAVATGSWDSFLRIWN*TSHTNKHLNTHPN 199
GH + + + +G +ATG D +RIW+ + ++ N + N
Sbjct: 16 GHRLSIFSIHIHPDGSRIATGGLDGTIRIWSTEAINRENENENEN 60
Score = 26.6 bits (56), Expect = 2.2
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 59 LAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN*TSHTN-KHLNTH 193
L GHDN + L + + V + DS + +WN T+ K + H
Sbjct: 130 LLGHDNDIQDLCWSYDSQLVVSVGLDSSIIVWNGTTFERLKRIEAH 175
>SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 27.9 bits (59), Expect = 0.97
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 59 LAGHDNRVSRLGVTENGMA-VATGSWDSFLRIWN 157
L HD +S L V + + VATGS D +++WN
Sbjct: 379 LQAHDGPISCLSVNPSVPSFVATGSTDRVVKLWN 412
>SPBC16A3.05c |rae1||RNA export factor Rae1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 352
Score = 27.5 bits (58), Expect = 1.3
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = +2
Query: 8 DFNCNVWDSMKSERAGILAGHDNRVSRLGVTE---NGMAVATGSWDSFLRIWN 157
D + V+D + + A HD+ V + E +ATGSWD L+ W+
Sbjct: 95 DKSAKVFDIQTGQNQQV-AAHDDAVRCVRFVEAMGTSPILATGSWDKTLKYWD 146
>SPBC1A4.07c |||U3 snoRNP-associated protein
Sof1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 436
Score = 27.5 bits (58), Expect = 1.3
Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 5 DDFNCNVWDSMKSERA-GILAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN 157
+D N ++D +RA + H + V + + G +GS+D +RI+N
Sbjct: 250 EDHNLYMYDMRNLKRALHVYKDHVSAVMSVDFSPTGQEFVSGSYDKTIRIYN 301
>SPCC126.01c ||SPCC576.18c|conserved fungal
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 369
Score = 27.5 bits (58), Expect = 1.3
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +2
Query: 8 DFNCNVWDSMKSERAGILAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN*TSHTNKHL 184
D W+ E L GH + V L + E + +GS D+ L +W+ +S ++ L
Sbjct: 111 DHTIKKWNVSTGECVETLIGHTDYVKCLLLLEEEGLLLSGSTDASLIVWDVSSQPSRLL 169
>SPAC806.02c |||Par A family ATPase iron cluster assembly
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 608
Score = 27.1 bits (57), Expect = 1.7
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +2
Query: 44 ERAGILAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN*T 163
E L GH+N V + + NG +AT S D + IW T
Sbjct: 369 ECTAALEGHENEVKCIAWSCNGNYLATCSRDKSVWIWEAT 408
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1207
Score = 27.1 bits (57), Expect = 1.7
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = +2
Query: 5 DDFNCNVWDSMKSERAGILAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN 157
DD+ NVW+ + L GH + V + + S D +RIWN
Sbjct: 73 DDYKVNVWNYKSRKLLFSLCGHMDYVRVCTFHHEYPWILSCSDDQTIRIWN 123
Score = 27.1 bits (57), Expect = 1.7
Identities = 12/51 (23%), Positives = 21/51 (41%)
Frame = +2
Query: 5 DDFNCNVWDSMKSERAGILAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN 157
DD +W+ IL GH + V + + + S D +R+W+
Sbjct: 115 DDQTIRIWNWQSRNCIAILTGHSHYVMCAAFHPSEDLIVSASLDQTVRVWD 165
>SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr
2|||Manual
Length = 404
Score = 27.1 bits (57), Expect = 1.7
Identities = 18/71 (25%), Positives = 31/71 (43%)
Frame = +2
Query: 68 HDNRVSRLGVTENGMAVATGSWDSFLRIWN*TSHTNKHLNTHPNICRMISQTSIHLYMYI 247
H V+ L T + +A+ D +R+WN S N P I + ++H M
Sbjct: 245 HYGTVNGLAWTSDARYLASCGTDDRIRVWNMESGRNTLREFGPIIHNQTTSFAVHPCMIQ 304
Query: 248 YKINVCMFVLY 280
++ +FVL+
Sbjct: 305 PSMDSDVFVLF 315
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 26.6 bits (56), Expect = 2.2
Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +3
Query: 216 VKHRSIYICI-SIKLMSVCSSCTPIELK 296
+ H+ Y+ + S++L S SC P ELK
Sbjct: 124 ISHKDFYVRLYSVELFSAILSCRPTELK 151
>SPAC343.17c |||WD repeat protein, human WDR70
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 576
Score = 26.6 bits (56), Expect = 2.2
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = +2
Query: 65 GHDNRVSRLGVTENGMAVATGSWDSFLRIW--N*TSHTNKH 181
GH V+ +NG TGS D+ + W N S TN H
Sbjct: 87 GHSKIVTTTTFDKNGSRFYTGSLDNTIHCWDLNGLSATNPH 127
>SPCC1235.09 |||histone deacetylase complex
subunit|Schizosaccharomyces pombe|chr 3|||Manual
Length = 564
Score = 26.2 bits (55), Expect = 3.0
Identities = 11/46 (23%), Positives = 24/46 (52%)
Frame = +2
Query: 20 NVWDSMKSERAGILAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN 157
++++++ ++ + H VS L + NG +ATG + IW+
Sbjct: 458 SMYNAISLQQLAVFMRHTAPVSALSFSHNGRYLATGDTSGGVCIWS 503
>SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 314
Score = 25.8 bits (54), Expect = 3.9
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +2
Query: 65 GHDNRVSRLGVTENGMAVATGSWDSFLRIWN 157
GH N V+ + +G +AT S D +++W+
Sbjct: 81 GHTNNVTAIAFHCDGKWLATSSEDGTVKVWD 111
>SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 509
Score = 25.4 bits (53), Expect = 5.2
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +2
Query: 5 DDFNCNVWDSMKSERAGILAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN 157
DD + VW+ S L GH V + + +A+GS D+ ++ W+
Sbjct: 184 DDGSLKVWNFHMSTEELKLTGHGWDVKTVDWHPSKGLLASGSKDNLVKFWD 234
>SPCC18.13 |||tRNA |Schizosaccharomyces pombe|chr 3|||Manual
Length = 421
Score = 25.0 bits (52), Expect = 6.8
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +2
Query: 53 GILAGHDNRVSRLGVTENGMAVATGSWDSFLRIWN 157
G GH++ VSR+ + +N + +G D+ + +W+
Sbjct: 220 GFCLGHEDFVSRMSLYDN-RTLISGGGDNHVFVWD 253
>SPAC17D4.01 |pex7|SPAC1834.12|peroxin-7 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 308
Score = 25.0 bits (52), Expect = 6.8
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 38 KSERAGILAGHDNRVSRLGVTENGMAVATGSWDSFLRIW 154
K +A I+A N V R V TGSWD +++W
Sbjct: 100 KEHKAEIVAIDTNTVDR-------RIVVTGSWDGTIKLW 131
>SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|chr
2|||Manual
Length = 807
Score = 24.6 bits (51), Expect = 9.0
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +2
Query: 56 ILAGHDNRVSRLGVTENGMAVATGSWDSFLRIW 154
++ GH V L G +A+ S+D L++W
Sbjct: 179 VIEGHHTFVGGLAFDPMGQFLASQSFDHTLKVW 211
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 24.6 bits (51), Expect = 9.0
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = +2
Query: 104 NGMAVATGSWDSFLRIWN*TSHTNKHLNTHPNICRMISQT 223
N + G F R +N SH N H N P C + ++
Sbjct: 569 NYVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKS 608
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,842,407
Number of Sequences: 5004
Number of extensions: 30055
Number of successful extensions: 186
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 185
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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