Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20175
(572 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosac... 175 3e-45
SPBC56F2.07c |||AAA family ATPase, unknown biological role|Schiz... 106 3e-24
SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pomb... 102 3e-23
SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr 1|||... 98 7e-22
SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyc... 95 6e-21
SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces p... 93 2e-20
SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces po... 92 6e-20
SPCC576.10c |rpt3||19S proteasome regulatory subunit Rpt3|Schizo... 89 3e-19
SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit Rpt2|Schi... 89 4e-19
SPBC16C6.07c |rpt1||19S proteasome regulatory subunit Rpt1|Schiz... 89 6e-19
SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit Rpt6|S... 85 7e-18
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 85 7e-18
SPAC328.04 |||AAA family ATPase, unknown biological role|Schizos... 85 9e-18
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 85 9e-18
SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit ... 84 2e-17
SPBC947.01 |||AAA family ATPase, unknown biological role|Schizos... 82 6e-17
SPCC1682.16 |rpt4||19S proteasome regulatory subunit Rpt4|Schizo... 78 1e-15
SPAC1834.11c |sec18||secretory pathway protein Sec18 |Schizosacc... 77 2e-15
SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces po... 73 2e-14
SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1 |Schiz... 68 1e-12
SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces po... 40 3e-04
SPBC83.08 |||AAA family ATPase Rvb2 |Schizosaccharomyces pombe|c... 34 0.017
SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyce... 32 0.069
SPAPB8E5.09 |||AAA family ATPase Rvb1 |Schizosaccharomyces pombe... 31 0.091
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 31 0.12
SPBC23E6.07c |rfc1||DNA replication factor C complex subunit Rfc... 31 0.16
SPAC4G9.12 |||gluconokinase|Schizosaccharomyces pombe|chr 1|||Ma... 29 0.64
SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex... 29 0.64
SPCC830.11c |||adenylate kinase |Schizosaccharomyces pombe|chr 3... 28 0.84
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 28 1.1
SPAC16C9.06c |upf1||ATP-dependent RNA helicase Upf1|Schizosaccha... 27 2.6
SPAC23D3.02 |rfc2||DNA replication factor C complex subunit Rfc2... 27 2.6
SPBC14F5.12c |cbh2||centromere binding protein Cbh2|Schizosaccha... 26 3.4
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 26 3.4
SPCC737.07c |||DNA polymerase alpha-associated DNA helicase A |S... 26 4.5
SPAC3H8.08c |||transcription factor|Schizosaccharomyces pombe|ch... 26 4.5
SPBC1604.20c |tea2|klp4|kinesin-like protein Tea2|Schizosaccharo... 26 4.5
SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor, ... 25 6.0
SPAC4G9.03 |adk1||adenylate kinase Adk1|Schizosaccharomyces pomb... 25 7.9
SPAC139.05 |||succinate-semialdehyde dehydrogenase |Schizosaccha... 25 7.9
SPCC4G3.16 |||CMP/dCMP deaminase family|Schizosaccharomyces pomb... 25 7.9
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 25 7.9
SPBC83.15 |||ribosome biogenesis protein Nsa1|Schizosaccharomyce... 25 7.9
>SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase
Cdc48|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 175 bits (427), Expect = 3e-45
Identities = 84/106 (79%), Positives = 94/106 (88%)
Frame = +3
Query: 255 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 434
VSQLLTLMDGMK S+V+VMAATNRPNSIDPALRRFGRFDRE+D+GIPD TGRLEILRIH
Sbjct: 345 VSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPTGRLEILRIH 404
Query: 435 TKNMKLGDDVDLEQIAAESHGHVGAISRXLCSEAALQQILRRWILI 572
TKNMKL DDVDLEQIAAE+HG+VG+ LCSEAA+QQI + +I
Sbjct: 405 TKNMKLADDVDLEQIAAETHGYVGSDLASLCSEAAMQQIREKMDMI 450
Score = 167 bits (405), Expect = 1e-42
Identities = 78/85 (91%), Positives = 85/85 (100%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
GILMYGPPGTGKTL+ARAVANETGAFFFLINGPEIMSK+AGESESNLRKAFEEA+KNSPA
Sbjct: 260 GILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPA 319
Query: 181 IIFIDELDAIAPKREKTHGEVERRM 255
IIFIDE+D+IAPKREKT+GEVERR+
Sbjct: 320 IIFIDEIDSIAPKREKTNGEVERRV 344
Score = 95.1 bits (226), Expect = 6e-21
Identities = 41/80 (51%), Positives = 59/80 (73%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G+L +GPPGTGKTL+A+A+ANE A F + GPE++S GESESN+R F++A +P
Sbjct: 533 GVLFFGPPGTGKTLLAKAIANECSANFISVKGPELLSMWFGESESNVRDIFDKARAAAPC 592
Query: 181 IIFIDELDAIAPKREKTHGE 240
++F+DELD+IA R + G+
Sbjct: 593 VVFLDELDSIAKARGASAGD 612
Score = 83.0 bits (196), Expect = 3e-17
Identities = 40/89 (44%), Positives = 55/89 (61%)
Frame = +3
Query: 243 GKTYVSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEI 422
G V+QLLT MDG+ +V V+ ATNRP+ IDPAL R GR D+ I + +PD R I
Sbjct: 616 GDRVVNQLLTEMDGVNSKKNVFVIGATNRPDQIDPALMRPGRLDQLIYVPLPDEEARFSI 675
Query: 423 LRIHTKNMKLGDDVDLEQIAAESHGHVGA 509
L+ ++ + +DVDL +A +HG GA
Sbjct: 676 LQTQLRHTPVAEDVDLRAVAKATHGFSGA 704
>SPBC56F2.07c |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 106 bits (254), Expect = 3e-24
Identities = 48/84 (57%), Positives = 62/84 (73%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G+L+YGPPGTGKT++ RAVA E A F I+GP ++ K GE+ES LRK FE+A + P+
Sbjct: 315 GVLLYGPPGTGKTMVMRAVAAEANAQVFTIDGPSVVGKYLGETESRLRKIFEDARAHQPS 374
Query: 181 IIFIDELDAIAPKREKTHGEVERR 252
IIFIDE+DA+APKR + E E R
Sbjct: 375 IIFIDEIDALAPKRTEDVSEAESR 398
Score = 97.9 bits (233), Expect = 9e-22
Identities = 50/102 (49%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Frame = +3
Query: 255 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 434
V+ LLTL+DGM + V+V+AATNRPNSID ALRR GR ++EI+IGIPD + RL+I+++
Sbjct: 400 VATLLTLLDGMANAGKVVVIAATNRPNSIDEALRRPGRLEKEIEIGIPDKSARLDIIKLL 459
Query: 435 TKNMKLG-DDVDLEQIAAESHGHVGAISRXLCSEAALQQILR 557
+ +D LE +A+ +H +VGA + EAAL+ I R
Sbjct: 460 LSGVPNEINDAQLEDLASRTHAYVGADLAAVVREAALRAIKR 501
Score = 87.8 bits (208), Expect = 1e-18
Identities = 36/74 (48%), Positives = 52/74 (70%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G+L+YGPPG KT+ A+A+A ETG F + GPE+ K GESE +R+ F++A + SP+
Sbjct: 584 GVLLYGPPGCSKTITAKAIATETGLNFIAVKGPELFDKFVGESERAVRQVFQKARQASPS 643
Query: 181 IIFIDELDAIAPKR 222
+IF DE+DA+ R
Sbjct: 644 VIFFDEIDALTANR 657
Score = 87.0 bits (206), Expect = 2e-18
Identities = 45/101 (44%), Positives = 64/101 (63%)
Frame = +3
Query: 240 SGKTYVSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLE 419
S V+ LL +DG++ +V+V+AATNRP+ IDPAL R GR DR + +G P+ R +
Sbjct: 662 SSDRVVAALLNELDGIEALRNVLVLAATNRPDMIDPALMRPGRLDRLLYVGPPNFEARKQ 721
Query: 420 ILRIHTKNMKLGDDVDLEQIAAESHGHVGAISRXLCSEAAL 542
I++I + MK +DVDL+ IA ++ G GA LC EA L
Sbjct: 722 IVKIQAEKMKFAEDVDLDLIAEKTEGCSGAEVVALCQEAGL 762
>SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 779
Score = 102 bits (245), Expect = 3e-23
Identities = 44/85 (51%), Positives = 63/85 (74%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G+L++GPPG GKT++A A+ANE G F I+ P I+S ++GESE +R+ FEEA +P
Sbjct: 210 GVLLHGPPGCGKTMLANALANELGVPFISISAPSIVSGMSGESEKKVREVFEEAKSLAPC 269
Query: 181 IIFIDELDAIAPKREKTHGEVERRM 255
++FIDE+DA+ PKRE E+ERR+
Sbjct: 270 LMFIDEIDAVTPKRESAQREMERRI 294
Score = 97.1 bits (231), Expect = 2e-21
Identities = 43/88 (48%), Positives = 63/88 (71%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G+L++GPPG GKTL+A+AVANE+ A F I GPE+++K GESE +R+ F A +SP
Sbjct: 528 GVLLWGPPGCGKTLLAKAVANESKANFISIRGPELLNKYVGESERAVRQVFLRARASSPC 587
Query: 181 IIFIDELDAIAPKREKTHGEVERRMFHS 264
+IF DELDA+ P+R+ + E R+ ++
Sbjct: 588 VIFFDELDAMVPRRDDSLSEASSRVVNT 615
Score = 84.2 bits (199), Expect = 1e-17
Identities = 50/120 (41%), Positives = 70/120 (58%), Gaps = 5/120 (4%)
Frame = +3
Query: 213 TKERENP-R*SGKTYVSQLLTLMDGMK----KSSHVIVMAATNRPNSIDPALRRFGRFDR 377
T +RE+ R + V+Q LT MD + V+V+ ATNRP+S+D ALRR GRFDR
Sbjct: 280 TPKRESAQREMERRIVAQFLTCMDELSFEKTDGKPVLVIGATNRPDSLDSALRRAGRFDR 339
Query: 378 EIDIGIPDATGRLEILRIHTKNMKLGDDVDLEQIAAESHGHVGAISRXLCSEAALQQILR 557
EI + +P R +ILR K +KL D D Q+A ++ G+VGA + L + A + I R
Sbjct: 340 EICLTVPSQDAREKILRTMAKGLKLSGDFDFRQLAKQTPGYVGADLKALTAAAGIIAIKR 399
Score = 72.1 bits (169), Expect = 5e-14
Identities = 41/98 (41%), Positives = 60/98 (61%), Gaps = 2/98 (2%)
Frame = +3
Query: 255 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 434
V+ LLT +DG+ S V V+AATNRP+ IDPA+ R GR D+ + + +PDA R+EIL+
Sbjct: 613 VNTLLTELDGLSDRSGVYVIAATNRPDIIDPAMLRPGRLDKTLLVDLPDAHERVEILKTL 672
Query: 435 TKNMKLGDDVDLEQIAAESH--GHVGAISRXLCSEAAL 542
TK L ++V+L+ + + GA L EAA+
Sbjct: 673 TKQTPLHEEVNLDVLGRDERCSNFSGADLAALVREAAV 710
Score = 25.0 bits (52), Expect = 7.9
Identities = 14/47 (29%), Positives = 19/47 (40%)
Frame = -2
Query: 442 FLVCMRRISRRPVASGMPMSISRSNRPKRRSAGSMEFGRFVAAITIT 302
FL CM +S + I +NRP + GRF I +T
Sbjct: 298 FLTCMDELSFEKTDGKPVLVIGATNRPDSLDSALRRAGRFDREICLT 344
>SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 948
Score = 98.3 bits (234), Expect = 7e-22
Identities = 43/74 (58%), Positives = 56/74 (75%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G+L+YGPPGTGKTL+A+AVA E F I GPE+++ GESE+N+R FE+A +SP
Sbjct: 690 GVLLYGPPGTGKTLLAKAVATELSLEFVSIKGPELLNMYVGESEANVRNVFEKARNSSPC 749
Query: 181 IIFIDELDAIAPKR 222
+IF DELD+IAP R
Sbjct: 750 VIFFDELDSIAPHR 763
Score = 75.4 bits (177), Expect = 6e-15
Identities = 44/106 (41%), Positives = 62/106 (58%), Gaps = 4/106 (3%)
Frame = +3
Query: 255 VSQLLTLMDGMKKSS--HVIVMAATNRPNSIDPALRRFGRFDREIDIGI-PDATGRLEIL 425
VSQLL +D + K + +V V+ ATNRP+ +DP+L R GRFD+ + +GI + +L
Sbjct: 777 VSQLLAELDSISKDNNKYVFVIGATNRPDLLDPSLLRPGRFDKLVYLGINKSEESKASML 836
Query: 426 RIHTKNMKLGDDVDLEQIAAESH-GHVGAISRXLCSEAALQQILRR 560
R TK KL + +DL +IA H GA LCS+A L I R+
Sbjct: 837 RALTKTFKLDETIDLNEIAKNCHPNFTGADMYALCSDAVLSAIKRK 882
Score = 38.7 bits (86), Expect = 6e-04
Identities = 23/69 (33%), Positives = 34/69 (49%)
Frame = +1
Query: 7 LMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAII 186
L++G P TGKT VA+ A F I+ E A E+ L + K+ AII
Sbjct: 426 LLHGNPFTGKTKAVEEVASLFSAPVFTISSYEFADATADHLEAKLDMFVQNVVKSPCAII 485
Query: 187 FIDELDAIA 213
F+ +LD ++
Sbjct: 486 FVKDLDVLS 494
>SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1190
Score = 95.1 bits (226), Expect = 6e-21
Identities = 51/104 (49%), Positives = 66/104 (63%), Gaps = 1/104 (0%)
Frame = +3
Query: 255 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 434
VS LL LMDGM+ VI++ ATNRP+++DPALRR GRFDRE +PD R +I+ IH
Sbjct: 392 VSTLLALMDGMESRGQVIIIGATNRPDAVDPALRRPGRFDREFYFPLPDRDARKKIIEIH 451
Query: 435 TKNMKLGDDVDL-EQIAAESHGHVGAISRXLCSEAALQQILRRW 563
T+N L +A +S G+ GA R LC+EAAL I R +
Sbjct: 452 TRNWDPPVPEWLCSMLAEKSKGYGGADLRALCTEAALNSIKRTY 495
Score = 78.2 bits (184), Expect = 8e-16
Identities = 38/86 (44%), Positives = 53/86 (61%), Gaps = 5/86 (5%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGA-----FFFLINGPEIMSKLAGESESNLRKAFEEAD 165
G+L +GPPGTGKTL+ARA+A + F++ G + +SK GE+E LR FEEA
Sbjct: 302 GVLFHGPPGTGKTLMARALAAACSSENKKVSFYMRKGADCLSKWVGEAERQLRLLFEEAK 361
Query: 166 KNSPAIIFIDELDAIAPKREKTHGEV 243
P+IIF DE+D +AP R ++
Sbjct: 362 STQPSIIFFDEIDGLAPVRSSKQEQI 387
>SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 773
Score = 93.5 bits (222), Expect = 2e-20
Identities = 45/98 (45%), Positives = 65/98 (66%), Gaps = 2/98 (2%)
Frame = +3
Query: 255 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 434
++QLL MDG S H++V A TNRP+ +DPAL R GRFDR+I I PD GR +I ++H
Sbjct: 420 LNQLLVEMDGFTSSEHIVVFAGTNRPDVLDPALLRPGRFDRQITIDRPDIGGREQIFKVH 479
Query: 435 TKNMKLGDDVDL--EQIAAESHGHVGAISRXLCSEAAL 542
K++K D++DL +++A + G GA +C+E AL
Sbjct: 480 LKHIKAADNIDLIAKRLAVLTSGFTGADIMNVCNEGAL 517
Score = 75.8 bits (178), Expect = 4e-15
Identities = 35/74 (47%), Positives = 45/74 (60%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G ++ GPPGTGKTL+A+A A E F ++G E + G S +R F A KN+P
Sbjct: 331 GAILSGPPGTGKTLLAKATAGEANVPFLSVSGSEFLEMFVGVGPSRVRDLFATARKNAPC 390
Query: 181 IIFIDELDAIAPKR 222
IIFIDE+DAI R
Sbjct: 391 IIFIDEIDAIGKAR 404
>SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 91.9 bits (218), Expect = 6e-20
Identities = 42/85 (49%), Positives = 60/85 (70%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
GIL+YGPPGTGK+ +A+AVA E G+ FF I+ +++SK GESE +R+ FE A + P+
Sbjct: 164 GILLYGPPGTGKSYLAKAVATEAGSTFFSISSSDLVSKWMGESERLVRQLFEMAREQKPS 223
Query: 181 IIFIDELDAIAPKREKTHGEVERRM 255
IIFIDE+D++ R + E RR+
Sbjct: 224 IIFIDEIDSLCGSRSEGESESSRRI 248
Score = 47.2 bits (107), Expect = 2e-06
Identities = 31/118 (26%), Positives = 60/118 (50%), Gaps = 2/118 (1%)
Frame = +3
Query: 210 CTKERENPR*SGKTYVSQLLTLMDGM-KKSSHVIVMAATNRPNSIDPALRRFGRFDREID 386
C E S + ++ L M+G+ K S V+V+ ATN P ++D A+RR RF++ I
Sbjct: 234 CGSRSEGESESSRRIKTEFLVQMNGVGKDESGVLVLGATNIPWTLDSAIRR--RFEKRIY 291
Query: 387 IGIPDATGRLEILRIHTKNMKLG-DDVDLEQIAAESHGHVGAISRXLCSEAALQQILR 557
I +P+A R + ++ + D +++A + G+ G+ + +A ++ + R
Sbjct: 292 IPLPNAHARARMFELNVGKIPSELTSQDFKELAKMTDGYSGSDISIVVRDAIMEPVRR 349
>SPCC576.10c |rpt3||19S proteasome regulatory subunit
Rpt3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 389
Score = 89.4 bits (212), Expect = 3e-19
Identities = 41/74 (55%), Positives = 52/74 (70%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G+L+YGPPGTGKT++ +AVAN T A F + G E + K GE +R F A +N+PA
Sbjct: 170 GVLLYGPPGTGKTMLVKAVANSTAANFIRVVGSEFVQKYLGEGPRMVRDVFRMARENAPA 229
Query: 181 IIFIDELDAIAPKR 222
IIFIDE+DAIA KR
Sbjct: 230 IIFIDEIDAIATKR 243
Score = 56.8 bits (131), Expect = 2e-09
Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Frame = +3
Query: 261 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDI-GIPDATGRLEILRIHT 437
+LLT MDG + ++V V+ ATNR +++DPAL R GR DR+I+ D R + + T
Sbjct: 260 ELLTQMDGFDQGANVKVIMATNRADTLDPALLRPGRLDRKIEFPSYRDRRQRRLVFQTIT 319
Query: 438 KNMKLGDDVDLEQIAAESHGHVGAISRXLCSEAAL 542
M L +VDL+ GA + +A L
Sbjct: 320 AKMLLSPEVDLDTFIMRPDASSGAQIAAIMQDAGL 354
>SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit
Rpt2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 448
Score = 89.0 bits (211), Expect = 4e-19
Identities = 39/85 (45%), Positives = 58/85 (68%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G+++YG PGTGKTL+A+AVAN+T A F + G E++ K G+ +R+ F A+++SP+
Sbjct: 227 GVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPS 286
Query: 181 IIFIDELDAIAPKREKTHGEVERRM 255
I+FIDE+DAI KR ER +
Sbjct: 287 IVFIDEIDAIGTKRYDAQSGAEREI 311
Score = 68.5 bits (160), Expect = 6e-13
Identities = 41/101 (40%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Frame = +3
Query: 261 QLLTLMDGMKKSSHVI-VMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHT 437
+LL +DG S I V+ ATNR + +DPAL R GR DR+I PD + +I IHT
Sbjct: 317 ELLNQLDGFDTSQRDIKVIMATNRISDLDPALIRPGRIDRKILFENPDEATKRKIFTIHT 376
Query: 438 KNMKLGDDVDLEQIAAESHGHVGAISRXLCSEAALQQILRR 560
M LG+DV+LE++ GA + + SEA L + R
Sbjct: 377 SKMNLGEDVNLEELIQCKDDLSGAEIKAIVSEAGLLALRER 417
>SPBC16C6.07c |rpt1||19S proteasome regulatory subunit
Rpt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 88.6 bits (210), Expect = 6e-19
Identities = 43/100 (43%), Positives = 61/100 (61%)
Frame = +3
Query: 261 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 440
+L+T +DG ++ V+ ATNRPN++D AL R GR DR+++ G+PD GR ILRIH K
Sbjct: 305 ELITQLDGFDPRGNIKVLFATNRPNTLDEALMRPGRIDRKVEFGLPDLEGRAHILRIHAK 364
Query: 441 NMKLGDDVDLEQIAAESHGHVGAISRXLCSEAALQQILRR 560
+M + D+ E IA GA R +C+EA + I R
Sbjct: 365 SMAIDKDIRWELIARLCPSQTGAELRSVCTEAGMFAIRAR 404
Score = 80.6 bits (190), Expect = 1e-16
Identities = 39/74 (52%), Positives = 47/74 (63%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
GI++YGPPGTGKTL ARAVAN T A F + G E++ K GE +R+ FE A
Sbjct: 215 GIMLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKAC 274
Query: 181 IIFIDELDAIAPKR 222
IIF DE+DAI R
Sbjct: 275 IIFFDEIDAIGGAR 288
>SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit
Rpt6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 403
Score = 85.0 bits (201), Expect = 7e-18
Identities = 42/90 (46%), Positives = 60/90 (66%), Gaps = 5/90 (5%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
GIL+YGPPGTGKTL+ARAVA+ T F ++G E++ K GE +R+ F A +++P+
Sbjct: 181 GILLYGPPGTGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS 240
Query: 181 IIFIDELDAIAPKREKTHG-----EVERRM 255
IIF+DE+D+I R + G EV+R M
Sbjct: 241 IIFMDEIDSIGSSRSDSSGGSGDSEVQRTM 270
Score = 82.6 bits (195), Expect = 4e-17
Identities = 41/100 (41%), Positives = 64/100 (64%)
Frame = +3
Query: 261 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 440
+LL +DG + + ++ V+ ATNR + +DPAL R GR DR+I+ P A R EILRIH++
Sbjct: 272 ELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPSAEARAEILRIHSR 331
Query: 441 NMKLGDDVDLEQIAAESHGHVGAISRXLCSEAALQQILRR 560
+M L +DL+ IA + +G GA + +C+EA + + R
Sbjct: 332 SMNLTRGIDLKSIAEKMNGASGAELKGVCTEAGMFALRER 371
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 85.0 bits (201), Expect = 7e-18
Identities = 46/103 (44%), Positives = 65/103 (63%), Gaps = 2/103 (1%)
Frame = +3
Query: 255 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 434
VS LL LMDG+ V+V+ ATNRPN +DPALRR GRFDRE +P+ R++IL I+
Sbjct: 498 VSTLLALMDGLDTRGQVVVIGATNRPNDLDPALRRPGRFDREFYFPLPNKQARMKILEIN 557
Query: 435 TKNM--KLGDDVDLEQIAAESHGHVGAISRXLCSEAALQQILR 557
+ + K+ + L +A + G+ GA + LC+EAAL + R
Sbjct: 558 SLHFSPKIPESY-LLHLAESTSGYGGADLKALCTEAALNAVRR 599
Score = 80.2 bits (189), Expect = 2e-16
Identities = 42/90 (46%), Positives = 56/90 (62%), Gaps = 9/90 (10%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGA-----FFFLINGPEIMSKLAGESESNLRKAFEEAD 165
G+L +GPPGTGKTL+AR +A FFL G + +SK GE+E LR FEEA
Sbjct: 408 GVLFHGPPGTGKTLMARVLAANCSTKNQKISFFLRKGSDCLSKWVGEAERQLRLLFEEAR 467
Query: 166 KNSPAIIFIDELDAIAP----KREKTHGEV 243
+ P+IIF DE+D +AP K+E+TH +
Sbjct: 468 RVQPSIIFFDEIDGLAPIRSSKQEQTHSSI 497
Score = 30.7 bits (66), Expect = 0.16
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 100 EIMSKLAGESESNLRKAFEEADKNSPAIIFIDELD 204
E++ S L K F EA KN+P+IIFI+ ++
Sbjct: 742 ELLMDTTTSPRSLLTKIFSEARKNAPSIIFINNVE 776
>SPAC328.04 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 84.6 bits (200), Expect = 9e-18
Identities = 40/82 (48%), Positives = 55/82 (67%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G+L++GPPGTGKT++ARAVA E+ + FF I+ + SK GESE +R F A K SP+
Sbjct: 494 GMLLFGPPGTGKTMLARAVATESRSVFFSISASSLTSKFLGESEKLVRALFTLAKKLSPS 553
Query: 181 IIFIDELDAIAPKREKTHGEVE 246
IIF+DE+D++ R E E
Sbjct: 554 IIFVDEIDSLLSARSSDGNEHE 575
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 84.6 bits (200), Expect = 9e-18
Identities = 47/100 (47%), Positives = 64/100 (64%), Gaps = 4/100 (4%)
Frame = +3
Query: 255 VSQLLTLMDGMKKS---SH-VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEI 422
++QLL +DG K+ +H V+ + ATN P S+DPAL R GRFDR I + +PD GRL I
Sbjct: 387 LNQLLVDLDGFSKNEDLAHPVVFIGATNFPESLDPALTRPGRFDRHIHVPLPDVRGRLAI 446
Query: 423 LRIHTKNMKLGDDVDLEQIAAESHGHVGAISRXLCSEAAL 542
L HT+++ LG DVDL IA + G GA L ++AA+
Sbjct: 447 LLQHTRHVPLGKDVDLSIIARGTSGFAGADLANLINQAAV 486
Score = 79.4 bits (187), Expect = 3e-16
Identities = 37/74 (50%), Positives = 48/74 (64%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G+L+ GPPGTGKT++ARAVA E FF ++G + G +R+ F A K +P+
Sbjct: 302 GVLLTGPPGTGKTMLARAVAGEANVPFFFMSGSQFDEMYVGVGAKRVRELFAAARKQAPS 361
Query: 181 IIFIDELDAIAPKR 222
IIFIDELDAI KR
Sbjct: 362 IIFIDELDAIGQKR 375
>SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit
Rpt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 438
Score = 83.8 bits (198), Expect = 2e-17
Identities = 37/94 (39%), Positives = 62/94 (65%)
Frame = +3
Query: 261 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 440
+LL +DG V V+AATNR +++DPAL R GR DR+++ +P+ R+ ILRIH++
Sbjct: 311 ELLNQLDGFSSDDRVKVIAATNRVDTLDPALLRSGRLDRKLEFPLPNEEARVGILRIHSR 370
Query: 441 NMKLGDDVDLEQIAAESHGHVGAISRXLCSEAAL 542
M + DD++ E++A + + GA+ + +C EA +
Sbjct: 371 KMAIDDDINWEELARSTDEYNGAMLKSVCVEAGM 404
Score = 82.2 bits (194), Expect = 5e-17
Identities = 45/89 (50%), Positives = 57/89 (64%), Gaps = 4/89 (4%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G LM+GPPGTGKTL+ARA A ++ A F + P+++ G+ +R AF A + SPA
Sbjct: 221 GCLMFGPPGTGKTLLARACAAQSNATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKSPA 280
Query: 181 IIFIDELDAIAPKR---EKT-HGEVERRM 255
IIFIDELDAI KR EK EV+R M
Sbjct: 281 IIFIDELDAIGTKRFDSEKAGDREVQRTM 309
>SPBC947.01 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 81.8 bits (193), Expect = 6e-17
Identities = 38/82 (46%), Positives = 55/82 (67%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G+L++GPPGTGKT++ARAVA E A FF I+ + SK G+SE +R FE A + + +
Sbjct: 414 GMLLFGPPGTGKTMLARAVATEAKATFFSISASSLTSKYLGDSEKLVRALFEVAKRQTCS 473
Query: 181 IIFIDELDAIAPKREKTHGEVE 246
+IF+DE+D+I R + E E
Sbjct: 474 VIFVDEIDSILSARNDSGNEHE 495
>SPCC1682.16 |rpt4||19S proteasome regulatory subunit
Rpt4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 388
Score = 77.8 bits (183), Expect = 1e-15
Identities = 36/74 (48%), Positives = 49/74 (66%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G+L+YGPPGTGKTL+ARAVA G F + I+ K GES +R+ F A ++ P
Sbjct: 168 GVLLYGPPGTGKTLLARAVAASLGVNFLKVVSSAIVDKYIGESARIIREMFGYAKEHEPC 227
Query: 181 IIFIDELDAIAPKR 222
+IF+DE+DAI +R
Sbjct: 228 VIFMDEIDAIGGRR 241
Score = 76.2 bits (179), Expect = 3e-15
Identities = 37/92 (40%), Positives = 57/92 (61%)
Frame = +3
Query: 261 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 440
+LL MDG ++ ATNRP+++DPAL R GR DR+I+I +P+ GR+EIL+IH +
Sbjct: 258 ELLNQMDGFDYLGQTKIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEVGRMEILKIHLE 317
Query: 441 NMKLGDDVDLEQIAAESHGHVGAISRXLCSEA 536
+ ++D E + + G GA R + +EA
Sbjct: 318 KVSKQGEIDYEALVKLTDGTNGADLRNVVTEA 349
>SPAC1834.11c |sec18||secretory pathway protein Sec18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 792
Score = 76.6 bits (180), Expect = 2e-15
Identities = 42/89 (47%), Positives = 56/89 (62%), Gaps = 9/89 (10%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFF-FLINGPEIMSKLAGESESNLRKAFEEADK--- 168
GIL+YGPPGTGKTLIAR + A ++NGPEI++K G+SE N+RK F +A++
Sbjct: 306 GILLYGPPGTGKTLIARQIGKMLNAREPKIVNGPEILNKYVGQSEENVRKLFADAEREYR 365
Query: 169 -----NSPAIIFIDELDAIAPKREKTHGE 240
+ II DELDAI KR + G+
Sbjct: 366 DRGEESGLHIIIFDELDAICKKRGSSGGD 394
Score = 75.4 bits (177), Expect = 6e-15
Identities = 41/103 (39%), Positives = 63/103 (61%), Gaps = 4/103 (3%)
Frame = +3
Query: 243 GKTYVSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEI 422
G V+QLL MDG+ + ++++V+ TNR + ID AL R GR + ++I +PD GRL+I
Sbjct: 398 GDQVVNQLLAKMDGVDQLNNILVIGMTNRKDMIDEALLRPGRLEVHMEISLPDEHGRLQI 457
Query: 423 LRIHTKNMK----LGDDVDLEQIAAESHGHVGAISRXLCSEAA 539
L+IHT M L +DVD+E++A+ + GA L A+
Sbjct: 458 LKIHTSRMASNGILENDVDMEELASLTKNFSGAEIAGLIKSAS 500
Score = 35.1 bits (77), Expect = 0.007
Identities = 17/70 (24%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +1
Query: 4 ILMYGPPGTGKTLIARAVA-NETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
+L+ GP +GKT +A +A F L++ ++ +++ + FE++ K+ +
Sbjct: 588 VLLSGPIASGKTALAATIALGSEFPFVKLVSAESMVGMNENARVAHVNRVFEDSYKSPLS 647
Query: 181 IIFIDELDAI 210
+I +DE++ I
Sbjct: 648 VIVVDEIERI 657
>SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 937
Score = 73.3 bits (172), Expect = 2e-14
Identities = 31/74 (41%), Positives = 46/74 (62%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
GIL++G PG GKT +A A+++ F I GPE++ K G+SE +R F A P
Sbjct: 642 GILLFGYPGCGKTYLASAISSTFPVQFISIKGPELLDKYIGKSEQGVRDLFSRAQMAKPC 701
Query: 181 IIFIDELDAIAPKR 222
++F DE D++AP+R
Sbjct: 702 VLFFDEFDSVAPRR 715
Score = 60.1 bits (139), Expect = 2e-10
Identities = 36/105 (34%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Frame = +3
Query: 255 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 434
V+Q+LT MDG + V ++AAT RP+ IDPAL R GR D+ I +P+ RLE+L+
Sbjct: 727 VNQILTQMDGAESLDGVYIVAATTRPDMIDPALLRPGRLDKLIFCDLPNEEERLEVLQKL 786
Query: 435 TKNMKLGDDVDLEQIAAESHGHVGAISRXLCSEA---ALQQILRR 560
+ + L++++ + G+ A L +A A+ ++L+R
Sbjct: 787 ANRFHIENAAMLKKLSTLTDGYTYADLSSLLYDAHLIAVHKLLKR 831
>SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 355
Score = 67.7 bits (158), Expect = 1e-12
Identities = 33/80 (41%), Positives = 49/80 (61%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G+L+YGPPG GKT++A+A+A ++ A F ++ + K GES + F A K P
Sbjct: 127 GLLLYGPPGCGKTMLAKALAKQSQATFINVSVGLLTDKWFGESNKLVDALFTLARKLEPT 186
Query: 181 IIFIDELDAIAPKREKTHGE 240
IIFIDE+D +R++T E
Sbjct: 187 IIFIDEIDTFLRQRQRTDHE 206
Score = 51.6 bits (118), Expect = 8e-08
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Frame = +3
Query: 258 SQLLTLMDGMKKS-SHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 434
++ +++ DG+ S V+V+ ATNRP ID A+RR R + I +P+A R +IL ++
Sbjct: 213 AEFMSMWDGLLSGQSRVLVLGATNRPADIDEAIRR--RMPKVFSIPLPNAEQRRKILELY 270
Query: 435 TKNMKLGDDVDLEQIAAESHGHVGAISRXLCSEA 536
K + L + D + + G G+ + +C A
Sbjct: 271 LKKVPLEANFDWNGVVNATAGLSGSYIKEVCRSA 304
>SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 449
Score = 39.5 bits (88), Expect = 3e-04
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +3
Query: 258 SQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIG--IPDATGRLEILRI 431
S LL +DG+ S I+ TN P +DPAL R GR D + +G P+ R R
Sbjct: 325 SGLLNALDGVTSSDERIIFMTTNHPEKLDPALVRPGRVDVKAYLGNATPEQV-REMFTRF 383
Query: 432 HTKNMKLGDDV 464
+ + ++ DD+
Sbjct: 384 YGHSPEMADDL 394
Score = 35.5 bits (78), Expect = 0.006
Identities = 24/81 (29%), Positives = 40/81 (49%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G L+YGPPG+GKT A+A E ++N E G ++ L A
Sbjct: 244 GYLLYGPPGSGKTSFLYALAGELDYDICVLNLAE-----KGLTDDRLNHLLSNVPPK--A 296
Query: 181 IIFIDELDAIAPKREKTHGEV 243
++ ++++D+ RE++ GEV
Sbjct: 297 VVLLEDVDSAFQGRERS-GEV 316
>SPBC83.08 |||AAA family ATPase Rvb2 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 465
Score = 33.9 bits (74), Expect = 0.017
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = +1
Query: 4 ILMYGPPGTGKTLIARAVANETGAF--FFLINGPEIMSKLAGESESNLR 144
ILM GPP TGKT IA +A G+ F ++ E+ S ++E+ L+
Sbjct: 68 ILMAGPPSTGKTAIAMGMAQSLGSDTPFVTLSASEVYSLEMSKTEALLQ 116
>SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1067
Score = 31.9 bits (69), Expect = 0.069
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Frame = +1
Query: 10 MYGPPGTGKTLIARAVANETGA--FFFLINGPEIMSKLAGESES-------NLRKAFEEA 162
+ GPPG GKT + +++A+ F F + G ++++ G + + +A ++
Sbjct: 576 LVGPPGVGKTSVGKSIASALNREFFRFSVGGLTDVAEIKGHRRTYIGAMPGKIVQALKKV 635
Query: 163 DKNSPAIIFIDELDAIAPKRE 225
+P +I IDE+D + +
Sbjct: 636 QTENP-LILIDEIDKVGKSHQ 655
>SPAPB8E5.09 |||AAA family ATPase Rvb1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 456
Score = 31.5 bits (68), Expect = 0.091
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETG--AFFFLINGPEIMSKLAGESES---NLRKAFEEAD 165
G+L G GTGKT +A A+A E G F + G E+ S ++E+ N R+A
Sbjct: 66 GVLFAGGAGTGKTALALAIAQELGPKVPFCPMVGSEVYSSEIKKTEALMENFRRAIGLRV 125
Query: 166 KNSPAIIFIDELDAIAPKREKTHGEVERRMFH 261
K + + + + + + E G + + H
Sbjct: 126 KETKEVYEGEVTEMVPEEAENPLGGYGKTISH 157
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 31.1 bits (67), Expect = 0.12
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +1
Query: 4 ILMYGPPGTGKTLIARAVANETGAFFFLIN 93
IL+ G PG GKT + A+A ETG IN
Sbjct: 1562 ILLEGSPGVGKTSLITALARETGHQLVRIN 1591
Score = 29.9 bits (64), Expect = 0.28
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +1
Query: 4 ILMYGPPGTGKTLIARAVANETGAFFFLINGPE 102
IL+ GP +GKT + VA +TG F IN E
Sbjct: 897 ILIQGPTSSGKTSMIEYVAKKTGHKFVRINNHE 929
>SPBC23E6.07c |rfc1||DNA replication factor C complex subunit
Rfc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 934
Score = 30.7 bits (66), Expect = 0.16
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +1
Query: 4 ILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 114
+L+ GPPG GKT A VA G +N + SK
Sbjct: 412 VLLSGPPGIGKTTAAHLVAKLEGYDVLELNASDTRSK 448
>SPAC4G9.12 |||gluconokinase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 193
Score = 28.7 bits (61), Expect = 0.64
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 7 LMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 114
++ GP G+GKT +A+AV+ + G F I G ++ K
Sbjct: 18 VVIGPAGSGKTTMAKAVSEKLG--FEYIEGDDLHPK 51
>SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex
subunit Rfc3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 342
Score = 28.7 bits (61), Expect = 0.64
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 4 ILMYGPPGTGKTLIARAVANE 66
+L YGPPGTGKT A A +
Sbjct: 59 MLFYGPPGTGKTSTILACARK 79
>SPCC830.11c |||adenylate kinase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 175
Score = 28.3 bits (60), Expect = 0.84
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 4 ILMYGPPGTGKTLIARAVANET 69
I++ G PGTGKT +A VA T
Sbjct: 11 IIICGTPGTGKTTLAEQVAETT 32
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 27.9 bits (59), Expect = 1.1
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +1
Query: 7 LMYGPPGTGKTLIARAVAN 63
L GP GTGKTL+ +A+A+
Sbjct: 618 LFCGPSGTGKTLLTKALAS 636
>SPAC16C9.06c |upf1||ATP-dependent RNA helicase
Upf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 925
Score = 26.6 bits (56), Expect = 2.6
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1
Query: 7 LMYGPPGTGKTLIARAV 57
L+ GPPGTGKT+ + +V
Sbjct: 411 LIQGPPGTGKTVTSASV 427
>SPAC23D3.02 |rfc2||DNA replication factor C complex subunit
Rfc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 340
Score = 26.6 bits (56), Expect = 2.6
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 4 ILMYGPPGTGKTLIARAVANE 66
+L YG PGTGKT A++ E
Sbjct: 55 MLFYGSPGTGKTSTILALSRE 75
>SPBC14F5.12c |cbh2||centromere binding protein
Cbh2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 514
Score = 26.2 bits (55), Expect = 3.4
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = -1
Query: 518 TRDRAHVTVRLCCD 477
TRD+A VTV +CC+
Sbjct: 204 TRDKARVTVTICCN 217
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 26.2 bits (55), Expect = 3.4
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 16 GPPGTGKTLIARAVANETGAFFFLIN 93
GP GTGKT +AV+ G F+ N
Sbjct: 1890 GPAGTGKTETVKAVSAYLGKNVFVFN 1915
>SPCC737.07c |||DNA polymerase alpha-associated DNA helicase A
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 660
Score = 25.8 bits (54), Expect = 4.5
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = +1
Query: 7 LMYGPPGTGKT 39
L++GPPGTGKT
Sbjct: 229 LIHGPPGTGKT 239
>SPAC3H8.08c |||transcription factor|Schizosaccharomyces pombe|chr
1|||Manual
Length = 563
Score = 25.8 bits (54), Expect = 4.5
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 475 RSQQSLTVTWARSRVSCARRQPCSR 549
RS +S + R +V C R+QPCSR
Sbjct: 14 RSPKSCLIC-RRRKVKCDRQQPCSR 37
>SPBC1604.20c |tea2|klp4|kinesin-like protein
Tea2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 628
Score = 25.8 bits (54), Expect = 4.5
Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 1/81 (1%)
Frame = +1
Query: 4 ILMYGPPGTGKTLIARAVANETGAFFFLINGP-EIMSKLAGESESNLRKAFEEADKNSPA 180
+ YG GTGKT + NE G +N E++ + + +R ++ E N
Sbjct: 214 VFAYGMTGTGKTYSMQGTENEPGIIPLAMNDLFEMVENNSDDDTFQIRISYLEI-YNERI 272
Query: 181 IIFIDELDAIAPKREKTHGEV 243
I D RE GEV
Sbjct: 273 RDLIGNSDEEPRIRENASGEV 293
>SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor,
zf-fungal binuclear cluster type |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 977
Score = 25.4 bits (53), Expect = 6.0
Identities = 7/23 (30%), Positives = 16/23 (69%)
Frame = -3
Query: 240 FTVGFLSLWCNSIEFINEDNSRR 172
+TV ++LW +++++ +D RR
Sbjct: 633 YTVKIIALWGRAVKYLKQDGKRR 655
>SPAC4G9.03 |adk1||adenylate kinase Adk1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 220
Score = 25.0 bits (52), Expect = 7.9
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +1
Query: 4 ILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESE 132
+++ GPPG GK A + + G L G + S++A ++E
Sbjct: 6 LILVGPPGAGKGTQAPNIQKKYG-IAHLATGDMLRSQVARQTE 47
>SPAC139.05 |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 493
Score = 25.0 bits (52), Expect = 7.9
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 115 LAGESESNLRKAFEEADKNSPAIIFID 195
L G+S S ++K E N+P I+F D
Sbjct: 250 LMGQSASTIKKVSMELGGNAPFIVFPD 276
>SPCC4G3.16 |||CMP/dCMP deaminase family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 405
Score = 25.0 bits (52), Expect = 7.9
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +1
Query: 28 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELD 204
T KT I + +G L++ P + + +A + + L+K E D+N+ + + + ELD
Sbjct: 93 TPKTSILELGSGISGLAGILLS-PFVGNYVASDKQLYLKKIRENLDQNNASDVEVHELD 150
>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
Bms1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1121
Score = 25.0 bits (52), Expect = 7.9
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +1
Query: 4 ILMYGPPGTGK-TLIARAVANETGAFFFLINGP 99
+ + GPPGTGK TLI V + I GP
Sbjct: 77 VAVMGPPGTGKSTLIKSLVRRYSKYTISQITGP 109
>SPBC83.15 |||ribosome biogenesis protein Nsa1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 387
Score = 25.0 bits (52), Expect = 7.9
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 321 TNRPNSIDPALRRFGRFDRE 380
T+ P S P +++FG DRE
Sbjct: 23 TSNPESEAPVIQKFGELDRE 42
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,048,375
Number of Sequences: 5004
Number of extensions: 36860
Number of successful extensions: 232
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 225
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 244081442
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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