Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20175
(572 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45627| Best HMM Match : AAA (HMM E-Value=0) 146 1e-35
SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.) 122 2e-28
SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.) 113 1e-25
SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 1e-19
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 90 1e-18
SB_49367| Best HMM Match : AAA (HMM E-Value=0) 88 5e-18
SB_55690| Best HMM Match : AAA (HMM E-Value=0) 87 7e-18
SB_48561| Best HMM Match : AAA (HMM E-Value=0) 86 2e-17
SB_33442| Best HMM Match : AAA (HMM E-Value=0) 86 2e-17
SB_7424| Best HMM Match : AAA (HMM E-Value=0) 85 5e-17
SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 5e-16
SB_732| Best HMM Match : AAA (HMM E-Value=0) 80 1e-15
SB_9909| Best HMM Match : AAA (HMM E-Value=0) 79 3e-15
SB_3115| Best HMM Match : AAA (HMM E-Value=0) 78 6e-15
SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 4e-14
SB_5903| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 5e-14
SB_19460| Best HMM Match : AAA (HMM E-Value=0) 73 2e-13
SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 6e-12
SB_28977| Best HMM Match : AAA (HMM E-Value=0) 66 3e-11
SB_46732| Best HMM Match : AAA (HMM E-Value=0.044) 55 5e-08
SB_33907| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 1e-07
SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_6656| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 8e-04
SB_25516| Best HMM Match : AAA_2 (HMM E-Value=0) 39 0.003
SB_3478| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.004
SB_31892| Best HMM Match : AAA (HMM E-Value=6.2e-25) 36 0.023
SB_11032| Best HMM Match : AAA (HMM E-Value=3.5) 35 0.041
SB_59437| Best HMM Match : AAA (HMM E-Value=7.4e-08) 32 0.29
SB_54124| Best HMM Match : AAA (HMM E-Value=7.8e-08) 32 0.29
SB_26897| Best HMM Match : AAA (HMM E-Value=4.2e-12) 31 0.51
SB_21493| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.51
SB_57268| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_51808| Best HMM Match : OmpA (HMM E-Value=0.72) 29 2.0
SB_46519| Best HMM Match : DUF720 (HMM E-Value=0.49) 29 2.0
SB_44158| Best HMM Match : OmpA (HMM E-Value=0.72) 29 2.0
SB_42682| Best HMM Match : OmpA (HMM E-Value=0.72) 29 2.0
SB_25694| Best HMM Match : RVT_1 (HMM E-Value=1.9e-22) 29 2.0
SB_10656| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_4259| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_42068| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_36695| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_19755| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_16760| Best HMM Match : OmpA (HMM E-Value=0.72) 29 2.0
SB_15796| Best HMM Match : RVT_1 (HMM E-Value=0.00082) 29 2.0
SB_10418| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_32582| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_24190| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0) 28 4.7
SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_380| Best HMM Match : AAA (HMM E-Value=0.14) 28 6.2
SB_13937| Best HMM Match : zf-CCCH (HMM E-Value=0.0017) 27 8.2
>SB_45627| Best HMM Match : AAA (HMM E-Value=0)
Length = 628
Score = 146 bits (354), Expect = 1e-35
Identities = 69/75 (92%), Positives = 73/75 (97%)
Frame = +3
Query: 255 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 434
VSQLLTLMDG+K+ SHVIVMAATNRPNS+D ALRRFGRFDRE+DIGIPDATGRLEILRIH
Sbjct: 182 VSQLLTLMDGLKQRSHVIVMAATNRPNSVDVALRRFGRFDREVDIGIPDATGRLEILRIH 241
Query: 435 TKNMKLGDDVDLEQI 479
TKNMKLGDDVDLEQI
Sbjct: 242 TKNMKLGDDVDLEQI 256
Score = 90.2 bits (214), Expect = 1e-18
Identities = 40/80 (50%), Positives = 56/80 (70%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G+L YGPPG GKTL+A+A+ANE A F I GPE+++ GESE+N+R F++A +P
Sbjct: 346 GVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARSAAPC 405
Query: 181 IIFIDELDAIAPKREKTHGE 240
++F DELD+IA R G+
Sbjct: 406 VLFFDELDSIAKSRGGNVGD 425
Score = 58.8 bits (136), Expect = 3e-09
Identities = 36/94 (38%), Positives = 50/94 (53%)
Frame = +3
Query: 255 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 434
++Q+LT MDGM +V ++ ATNRP+ IDPA+ R GR D+ I I +PD
Sbjct: 434 INQVLTEMDGMNVKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPD----------- 482
Query: 435 TKNMKLGDDVDLEQIAAESHGHVGAISRXLCSEA 536
DVDL+ +A +HG GA +C A
Sbjct: 483 ------DGDVDLDYVAKVTHGFSGADLTEICQRA 510
>SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 802
Score = 122 bits (295), Expect = 2e-28
Identities = 54/85 (63%), Positives = 68/85 (80%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
GIL+YGP GTGKT+IARAVANETG FF INGPE++S+ GE+E+ LR+ F EA SP+
Sbjct: 292 GILLYGPSGTGKTMIARAVANETGVHFFCINGPEVLSRYYGETEARLREIFTEAQNKSPS 351
Query: 181 IIFIDELDAIAPKREKTHGEVERRM 255
I+FIDELDA+ P+R+K E ERR+
Sbjct: 352 IVFIDELDALCPRRDKVQNEFERRV 376
Score = 98.3 bits (234), Expect = 4e-21
Identities = 54/105 (51%), Positives = 69/105 (65%), Gaps = 4/105 (3%)
Frame = +3
Query: 255 VSQLLTLMDGMKKSS---HVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEIL 425
V+ LLTLMDGM S +V+V+AATNRP+++DPALRR GRFDREI+IGIP T R +IL
Sbjct: 377 VATLLTLMDGMHMKSTDTYVMVLAATNRPDALDPALRRPGRFDREIEIGIPSVTDRRDIL 436
Query: 426 RIHTKNMKLG-DDVDLEQIAAESHGHVGAISRXLCSEAALQQILR 557
KN+ D D+ +A +HG+VGA C EA+L R
Sbjct: 437 VTLLKNVPHSLHDEDISSLAESAHGYVGADLAAACKEASLYAFKR 481
Score = 96.3 bits (229), Expect = 2e-20
Identities = 46/79 (58%), Positives = 56/79 (70%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
GILMYGPPG KTLIARA+A E+G F I GPE+ SK GESE +R+ F +A +P+
Sbjct: 573 GILMYGPPGCSKTLIARALATESGLNFIAIKGPELFSKWVGESEKAVREVFLKARATAPS 632
Query: 181 IIFIDELDAIAPKREKTHG 237
I+F DELDAIA +R T G
Sbjct: 633 IVFFDELDAIAGQRNSTGG 651
Score = 73.7 bits (173), Expect = 1e-13
Identities = 41/96 (42%), Positives = 55/96 (57%)
Frame = +3
Query: 255 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 434
++QLLT +DG++ VI +AATNRP+ ID AL R GR DR I + +P R IL IH
Sbjct: 659 LTQLLTELDGVETLKDVIFIAATNRPDMIDKALMRPGRVDRLIYVPLPCWDTRRHILEIH 718
Query: 435 TKNMKLGDDVDLEQIAAESHGHVGAISRXLCSEAAL 542
+DLE + + G+ GA +C EAAL
Sbjct: 719 LARTPCEGSLDLEDLVERTEGYSGAEIAAVCREAAL 754
>SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 908
Score = 113 bits (272), Expect = 1e-25
Identities = 58/116 (50%), Positives = 74/116 (63%)
Frame = +3
Query: 210 CTKERENPR*SGKTYVSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDI 389
C K + V+QLLTLMDG++ VIV+ ATNRPN++DPALRR GRFDRE+ I
Sbjct: 320 CPKRGSSGNEEENRIVAQLLTLMDGLESRGRVIVIGATNRPNALDPALRRPGRFDREVVI 379
Query: 390 GIPDATGRLEILRIHTKNMKLGDDVDLEQIAAESHGHVGAISRXLCSEAALQQILR 557
G+P A RL+ILR H K + L DVDL +A + G+VGA LC +AA + R
Sbjct: 380 GVPSAGQRLDILRAHCKPINLSVDVDLTHLAEITVGYVGADLASLCQQAAFAALKR 435
Score = 74.5 bits (175), Expect = 5e-14
Identities = 37/88 (42%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEE---ADKN 171
GIL+ G PG GKTL+ + G NG ++ AGESE NLR+ F + A +
Sbjct: 247 GILLVGAPGVGKTLLVHKATVDCGIKLVSTNGTDVFGPHAGESEENLRRVFNKARYASRF 306
Query: 172 SPAIIFIDELDAIAPKREKTHGEVERRM 255
P ++FIDELDA+ PKR + E E R+
Sbjct: 307 GPCVLFIDELDALCPKRGSSGNEEENRI 334
Score = 68.5 bits (160), Expect = 4e-12
Identities = 38/77 (49%), Positives = 47/77 (61%)
Frame = +3
Query: 303 VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLEQIA 482
+I++AATNRP +ID AL R GR D I + PD RLEILR+HT+ L DVDL IA
Sbjct: 699 LILVAATNRPEAIDGALLRPGRIDCMIYVPPPDMKARLEILRVHTRFSPLAPDVDLSVIA 758
Query: 483 AESHGHVGAISRXLCSE 533
+ + GA LC E
Sbjct: 759 EGTELYSGADLENLCRE 775
Score = 59.7 bits (138), Expect = 2e-09
Identities = 32/85 (37%), Positives = 49/85 (57%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G+L+YGPPG KT + RA A+ T F ++ ++ S G++E LR E P
Sbjct: 520 GVLLYGPPGCCKTTLVRAAASSTHCTFMSLSCAQLFSSYVGDAERTLR----ELVLQLPL 575
Query: 181 IIFIDELDAIAPKREKTHGEVERRM 255
++F+DELD++A KR G +E R+
Sbjct: 576 LLFLDELDSLAGKRGNNLG-METRL 599
>SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1086
Score = 93.1 bits (221), Expect = 1e-19
Identities = 39/77 (50%), Positives = 55/77 (71%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G+L+YGPPGTGKTL+A+AVA E F + GPE+++ G+SE N+R+ F A SP
Sbjct: 846 GVLLYGPPGTGKTLMAKAVATECSLNFLSVKGPELINMYVGQSEQNVREVFSRAQAASPC 905
Query: 181 IIFIDELDAIAPKREKT 231
+IF DELD++AP R ++
Sbjct: 906 VIFFDELDSLAPNRGRS 922
Score = 63.3 bits (147), Expect = 1e-10
Identities = 38/103 (36%), Positives = 60/103 (58%), Gaps = 2/103 (1%)
Frame = +3
Query: 255 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGI-PDATGRLEILRI 431
V+QLL +DG+ + V V+ ATNRP+ +DPAL R GRFD+ + +G+ D +L +L+
Sbjct: 933 VAQLLAELDGLHSTCDVFVIGATNRPDLLDPALLRPGRFDKLLYLGVSEDHHAQLSVLKA 992
Query: 432 HTKNMKLGDDVDLEQIAAESHGHV-GAISRXLCSEAALQQILR 557
T+ D LE+ A + ++ GA + S+A LQ + R
Sbjct: 993 LTRKFTFSADFRLEEFANKLPLNLTGADLYAMASDALLQAMRR 1035
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 90.2 bits (214), Expect = 1e-18
Identities = 37/74 (50%), Positives = 55/74 (74%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
GIL+ GPPG GKTL+A+A+ANE+G F + GPE+++ GESE +R+ F+ A ++P
Sbjct: 19 GILLAGPPGCGKTLLAKAIANESGINFISVKGPELLNMYVGESERAVRQVFQRARNSAPC 78
Query: 181 IIFIDELDAIAPKR 222
+IF DELD++ P+R
Sbjct: 79 VIFFDELDSLCPRR 92
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +3
Query: 255 VSQLLTLMDGMKKSSHVIVMAATNRPNSID 344
V+QLLT MDG++ HV +M ATN+P D
Sbjct: 105 VNQLLTEMDGLQARKHVFIMGATNKPGIRD 134
>SB_49367| Best HMM Match : AAA (HMM E-Value=0)
Length = 976
Score = 87.8 bits (208), Expect = 5e-18
Identities = 40/85 (47%), Positives = 57/85 (67%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G L++GPPG GKTL+A A+A E F + EI+S ++GESE +R+ F A +P
Sbjct: 712 GFLLHGPPGCGKTLLAHAIAGELEMPFLKLAATEIVSGVSGESEEKVRELFTSAVAQAPC 771
Query: 181 IIFIDELDAIAPKREKTHGEVERRM 255
I+F+DE+DAI PKRE ++ERR+
Sbjct: 772 ILFLDEIDAITPKRENASKDMERRI 796
Score = 75.8 bits (178), Expect = 2e-14
Identities = 39/74 (52%), Positives = 53/74 (71%), Gaps = 3/74 (4%)
Frame = +3
Query: 213 TKERENP-R*SGKTYVSQLLTLMDGMKKS--SHVIVMAATNRPNSIDPALRRFGRFDREI 383
T +REN + + VSQLL+ MD + + +HV+V+ ATNRP+S+DPALRR GRFDREI
Sbjct: 782 TPKRENASKDMERRIVSQLLSCMDDLNNNPDAHVLVIGATNRPDSLDPALRRAGRFDREI 841
Query: 384 DIGIPDATGRLEIL 425
+GIPD + R I+
Sbjct: 842 SMGIPDESARARIV 855
>SB_55690| Best HMM Match : AAA (HMM E-Value=0)
Length = 1031
Score = 87.4 bits (207), Expect = 7e-18
Identities = 39/74 (52%), Positives = 49/74 (66%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G+L+YGPPGTGKTL+A VA E G F I GPE++SK G SE +R F A P
Sbjct: 703 GLLLYGPPGTGKTLLAGVVAKECGLNFISIKGPELLSKYIGASEQAVRDMFTRAQSAKPC 762
Query: 181 IIFIDELDAIAPKR 222
I+F DE D++AP+R
Sbjct: 763 ILFFDEFDSLAPRR 776
Score = 77.8 bits (183), Expect = 6e-15
Identities = 41/101 (40%), Positives = 61/101 (60%)
Frame = +3
Query: 255 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 434
V+QLLT +DG++ V ++AAT+RP+ IDPAL R GR D+ + IPD R E+ R
Sbjct: 788 VNQLLTQLDGVEGLKGVYILAATSRPDLIDPALLRPGRLDKCVYCPIPDQGDRREVFRAL 847
Query: 435 TKNMKLGDDVDLEQIAAESHGHVGAISRXLCSEAALQQILR 557
+ ++ L DD+DL+ I+ H GA + L + L+ I R
Sbjct: 848 SHDLPLADDIDLDSISDSCHHFTGADIKALLYNSQLEAIHR 888
>SB_48561| Best HMM Match : AAA (HMM E-Value=0)
Length = 2021
Score = 86.2 bits (204), Expect = 2e-17
Identities = 46/104 (44%), Positives = 63/104 (60%), Gaps = 1/104 (0%)
Frame = +3
Query: 255 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 434
VS LL LMDG+ V+++ ATNR ++IDPALRR GRFDRE +PD R IL IH
Sbjct: 1010 VSTLLALMDGLDSRGEVVIIGATNRIDAIDPALRRPGRFDREFQFALPDRDARRSILSIH 1069
Query: 435 TKNMKLG-DDVDLEQIAAESHGHVGAISRXLCSEAALQQILRRW 563
T+ + + ++A G+ GA + LC+EAAL + RR+
Sbjct: 1070 TREWEPRLSQRFISELADYCVGYCGADIKALCTEAALCALRRRY 1113
Score = 82.6 bits (195), Expect = 2e-16
Identities = 40/86 (46%), Positives = 54/86 (62%), Gaps = 5/86 (5%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETG-----AFFFLINGPEIMSKLAGESESNLRKAFEEAD 165
G+L +GPPGTGKTL+ARA+ANE FF+ G + +SK GESE LR F++A
Sbjct: 920 GVLFFGPPGTGKTLVARALANECSQGDKKVSFFMRKGADCLSKWVGESERQLRLLFDQAY 979
Query: 166 KNSPAIIFIDELDAIAPKREKTHGEV 243
P+IIF DE+D +AP R ++
Sbjct: 980 AMRPSIIFFDEIDGLAPVRSSRQDQI 1005
>SB_33442| Best HMM Match : AAA (HMM E-Value=0)
Length = 369
Score = 86.2 bits (204), Expect = 2e-17
Identities = 40/74 (54%), Positives = 52/74 (70%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G+L+YGPPG GKT++A+AVA+ T A F + G E + K GE +R F A +N+PA
Sbjct: 200 GVLLYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPA 259
Query: 181 IIFIDELDAIAPKR 222
IIFIDE+DAIA KR
Sbjct: 260 IIFIDEIDAIATKR 273
Score = 62.1 bits (144), Expect = 3e-10
Identities = 31/71 (43%), Positives = 45/71 (63%)
Frame = +3
Query: 261 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 440
+LL MDG ++ +V V+ ATNR +++DPAL R GR DR+I+ +PD + I T
Sbjct: 290 ELLNQMDGFDQNVNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITN 349
Query: 441 NMKLGDDVDLE 473
M L ++VDLE
Sbjct: 350 KMNLSEEVDLE 360
>SB_7424| Best HMM Match : AAA (HMM E-Value=0)
Length = 294
Score = 84.6 bits (200), Expect = 5e-17
Identities = 43/98 (43%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Frame = +3
Query: 255 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 434
++QLL MDG S++V+V++ TNRP+ +DPAL R GRFDR+I + PD GR I ++H
Sbjct: 172 LNQLLVEMDGFSSSTNVVVLSGTNRPDVLDPALLRPGRFDRQIHLPAPDIKGRCSIFKVH 231
Query: 435 TKNMKLGDDVD--LEQIAAESHGHVGAISRXLCSEAAL 542
K +K D + ++AA + G GA +C+EAAL
Sbjct: 232 LKPIKKNVDEEKLARKMAALTPGFTGADIANVCNEAAL 269
Score = 79.4 bits (187), Expect = 2e-15
Identities = 36/74 (48%), Positives = 48/74 (64%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G ++ GPPGTGKTL+A+AVA E G F I+G E + G + +R F +A KN+P
Sbjct: 83 GAILSGPPGTGKTLLAKAVAGEAGVPFLSISGSEFLEMFVGVGPARVRDLFAQARKNAPC 142
Query: 181 IIFIDELDAIAPKR 222
IIFIDE+DA+ R
Sbjct: 143 IIFIDEIDAVGRAR 156
>SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 518
Score = 81.4 bits (192), Expect = 5e-16
Identities = 40/86 (46%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G+LM GPPGTGKT++A+AVA E G FF ++ + SK GESE +R FE A +P+
Sbjct: 285 GVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRILFEMARFYAPS 344
Query: 181 IIFIDELDAIAPKR-EKTHGEVERRM 255
IF+DE+D+I +R + E RR+
Sbjct: 345 TIFVDEIDSICSRRGSDSEHEASRRV 370
Score = 34.7 bits (76), Expect = 0.054
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Frame = +3
Query: 258 SQLLTLMDGMKKSS------HVIVMAATNRPNSIDPALRRFGRFDREIDIGIP 398
S+LL MDG+ SS V+V+AATN P +D ALRR R ++ I I +P
Sbjct: 372 SELLVQMDGVGGSSDDGETKQVMVLAATNFPWDLDEALRR--RLEKRIYIPLP 422
>SB_732| Best HMM Match : AAA (HMM E-Value=0)
Length = 388
Score = 79.8 bits (188), Expect = 1e-15
Identities = 43/108 (39%), Positives = 69/108 (63%), Gaps = 4/108 (3%)
Frame = +3
Query: 255 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 434
V+QLL +DG+++ ++V+++ TNR + ID AL R GR + +++IG+PD GR++IL+IH
Sbjct: 281 VNQLLAKIDGVEQLNNVLLIGMTNRRDLIDDALLRPGRLEVQVEIGLPDEEGRVQILKIH 340
Query: 435 TKNMK----LGDDVDLEQIAAESHGHVGAISRXLCSEAALQQILRRWI 566
T M+ L DDVDL ++A ++ GA L AA + R+I
Sbjct: 341 TAKMRENKVLADDVDLAELATQTKNFTGAEIEGLV-RAAQSTAMNRFI 387
Score = 68.1 bits (159), Expect = 5e-12
Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 9/83 (10%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFF-FLINGPEIMSKLAGESESNLRKAFEEA----- 162
GIL++GPPGTGKTL+AR + +I+GPE+++K GESE+N+RK F EA
Sbjct: 184 GILLFGPPGTGKTLMARQIGTMLNTREPKIISGPEVLNKFVGESEANIRKLFAEAEEEQK 243
Query: 163 ---DKNSPAIIFIDELDAIAPKR 222
D ++ +I DE DA+ R
Sbjct: 244 RFGDNSALHLIIFDEFDAVCKSR 266
>SB_9909| Best HMM Match : AAA (HMM E-Value=0)
Length = 400
Score = 79.0 bits (186), Expect = 3e-15
Identities = 37/74 (50%), Positives = 47/74 (63%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G+L++GPPGTGKTL ARAVAN T A F + G E++ K GE +R+ FE A
Sbjct: 120 GVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKAC 179
Query: 181 IIFIDELDAIAPKR 222
I+F DE+DAI R
Sbjct: 180 IVFFDEIDAIGGAR 193
Score = 54.0 bits (124), Expect = 8e-08
Identities = 21/47 (44%), Positives = 34/47 (72%)
Frame = +3
Query: 261 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPD 401
+L+ +DG ++ V+ ATNRP+++DPAL R GR DR+++ G+PD
Sbjct: 210 ELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPD 256
>SB_3115| Best HMM Match : AAA (HMM E-Value=0)
Length = 913
Score = 77.8 bits (183), Expect = 6e-15
Identities = 42/98 (42%), Positives = 60/98 (61%), Gaps = 2/98 (2%)
Frame = +3
Query: 255 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 434
++QLL MDGM VI++A+TNR + +D AL R GRFDR I I +P R+EI +H
Sbjct: 249 LNQLLVEMDGMNTLDGVIMLASTNRADILDNALLRPGRFDRHIAIDLPTLPERMEIFEVH 308
Query: 435 TKNMKLGDDVD--LEQIAAESHGHVGAISRXLCSEAAL 542
K + L +D +++A + GH GA +C+EAAL
Sbjct: 309 LKKLTLKRSIDQYTKRLAELTPGHSGADIANICNEAAL 346
Score = 70.9 bits (166), Expect = 7e-13
Identities = 33/77 (42%), Positives = 47/77 (61%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G L+ GPPGTGKTL+A+AVA E F + G + + AG + +R F A K +P
Sbjct: 160 GALLVGPPGTGKTLLAKAVATEADVPFLSMAGSDFVEMFAGVGSARVRDLFTRARKLAPC 219
Query: 181 IIFIDELDAIAPKREKT 231
I++IDE+DAI R+ +
Sbjct: 220 IVYIDEVDAIGRSRKSS 236
>SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 256
Score = 74.9 bits (176), Expect = 4e-14
Identities = 34/74 (45%), Positives = 46/74 (62%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G+L+ G PGTGKTL+A+AVA E G FF +G E G + +R F A +++P
Sbjct: 166 GVLLIGSPGTGKTLLAKAVAGEAGVPFFFCSGSEFDEMFVGVGAARVRNLFAAAKEHAPC 225
Query: 181 IIFIDELDAIAPKR 222
I+F+DELDAI R
Sbjct: 226 IVFVDELDAIGGSR 239
>SB_5903| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 74.5 bits (175), Expect = 5e-14
Identities = 36/99 (36%), Positives = 59/99 (59%)
Frame = +3
Query: 261 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 440
+LL +DG + V+AATNR + +DPAL R GR DR+I+ PD R IL+IH++
Sbjct: 219 ELLNQLDGFSSHHDIKVIAATNRVDILDPALLRSGRLDRKIEFPNPDQEARARILQIHSR 278
Query: 441 NMKLGDDVDLEQIAAESHGHVGAISRXLCSEAALQQILR 557
M + DV+ ++++ + GA+ + +C EA + + R
Sbjct: 279 KMNVSGDVNFDELSRCTDDFNGAMLKAVCVEAGMIALRR 317
Score = 41.1 bits (92), Expect = 6e-04
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Frame = +1
Query: 100 EIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR---EKT-HGEVERRM 255
+I G+ +R AF A + +PAIIFIDELDAI KR EK EV+R M
Sbjct: 162 QIQEMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTM 217
>SB_19460| Best HMM Match : AAA (HMM E-Value=0)
Length = 340
Score = 72.9 bits (171), Expect = 2e-13
Identities = 35/85 (41%), Positives = 54/85 (63%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G+L+YGPPG KT + RA A+ T F ++ ++ S G++E LR+ F +A +PA
Sbjct: 49 GVLLYGPPGCCKTTLVRAAASSTHCTFMSLSCAQLFSSYVGDAERTLRELFLKARATAPA 108
Query: 181 IIFIDELDAIAPKREKTHGEVERRM 255
I+F+DELD++A KR G +E R+
Sbjct: 109 ILFLDELDSLAGKRGNNLG-METRL 132
Score = 68.5 bits (160), Expect = 4e-12
Identities = 38/77 (49%), Positives = 47/77 (61%)
Frame = +3
Query: 303 VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLEQIA 482
+I++AATNRP +ID AL R GR D I + PD RLEILR+HT+ L DVDL IA
Sbjct: 232 LILVAATNRPEAIDGALLRPGRIDCMIYVPPPDMKARLEILRVHTRFSPLAPDVDLSVIA 291
Query: 483 AESHGHVGAISRXLCSE 533
+ + GA LC E
Sbjct: 292 EGTELYSGADLENLCRE 308
>SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 67.7 bits (158), Expect = 6e-12
Identities = 35/88 (39%), Positives = 54/88 (61%), Gaps = 14/88 (15%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKA---------- 150
G+L+YGPPGTGKTL+ARAVA+ T F ++G E++ K GE +R+
Sbjct: 213 GVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMARHGENL 272
Query: 151 ----FEEADKNSPAIIFIDELDAIAPKR 222
F ++ +++P+IIF+DE+D+I R
Sbjct: 273 QAMYFVDSREHAPSIIFMDEIDSIGSSR 300
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/50 (40%), Positives = 32/50 (64%)
Frame = +3
Query: 261 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATG 410
+LL +DG + + ++ V+ ATNR + +D AL R GR DR+I+ P+ G
Sbjct: 317 ELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEG 366
>SB_28977| Best HMM Match : AAA (HMM E-Value=0)
Length = 442
Score = 65.7 bits (153), Expect = 3e-11
Identities = 32/78 (41%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Frame = +1
Query: 25 GTGKTLIARAVANETG-AFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDEL 201
GTGK+ +A+AVA E + F ++ +++SK GESE +++ FE A +N P+IIFIDE+
Sbjct: 175 GTGKSYLAKAVATEANNSTFISVSSSDLVSKWLGESERLVKQLFELARENKPSIIFIDEV 234
Query: 202 DAIAPKREKTHGEVERRM 255
D++ R + E RR+
Sbjct: 235 DSLCGSRSENESESARRI 252
Score = 50.4 bits (115), Expect = 1e-06
Identities = 32/116 (27%), Positives = 59/116 (50%), Gaps = 2/116 (1%)
Frame = +3
Query: 210 CTKERENPR*SGKTYVSQLLTLMDGMK-KSSHVIVMAATNRPNSIDPALRRFGRFDREID 386
C EN S + ++ L M G+ + V+V+ ATN P ++D A+RR RF++ I
Sbjct: 238 CGSRSENESESARRIKTEFLVQMQGVGVDNDQVLVLGATNIPWTLDSAIRR--RFEKRIY 295
Query: 387 IGIPDATGRLEILRIHTKNMK-LGDDVDLEQIAAESHGHVGAISRXLCSEAALQQI 551
I +P+ R ++ +H K L +++Q+ ++ G+ GA + EA + +
Sbjct: 296 IPLPEQAARSKMFELHLGGSKTLLGAQEIKQLGQKTDGYSGADISVVVREALMMPV 351
>SB_46732| Best HMM Match : AAA (HMM E-Value=0.044)
Length = 430
Score = 54.8 bits (126), Expect = 5e-08
Identities = 25/76 (32%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Frame = +1
Query: 4 ILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAI 183
+L YGPPGTGKT+ A+++A +G + ++ G +++ + E + + K F+ A+ + +
Sbjct: 332 LLFYGPPGTGKTMFAKSLARHSGMDYAVMTGGDVV-PMGKEGVTAMHKVFDWAETSRRGV 390
Query: 184 -IFIDELDAIAPKREK 228
+F+DE DA KR +
Sbjct: 391 LLFVDEADAFLRKRSQ 406
>SB_33907| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 53.2 bits (122), Expect = 1e-07
Identities = 21/37 (56%), Positives = 30/37 (81%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMS 111
GIL+ GPPG GKTL+A+A+ANE+G F + GPE+++
Sbjct: 19 GILLAGPPGCGKTLLAKAIANESGINFISVKGPELLN 55
>SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 52.4 bits (120), Expect = 3e-07
Identities = 21/38 (55%), Positives = 30/38 (78%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 114
G+++YG PGTGKTL+A+AVAN+T A F + G E++ K
Sbjct: 416 GVILYGQPGTGKTLLAKAVANQTSATFLRVVGSELIQK 453
>SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/54 (42%), Positives = 30/54 (55%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA 162
GIL+ G PG GKTL+ + G NG ++ AGESE NLR+ F +A
Sbjct: 77 GILLVGAPGVGKTLLVHKATVDCGIKLVSTNGTDVFGPHAGESEENLRRVFNKA 130
>SB_6656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 461
Score = 40.7 bits (91), Expect = 8e-04
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = +1
Query: 4 ILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGES--ESNLRKAFEEADKNSP 177
+L+ GP G GK ++ + ETGA F + I K G++ L F+ A + P
Sbjct: 210 VLITGPRGVGKKMLVHCICTETGANLFDLTAANIAGKYPGKAGLAMLLHMVFKVARQLQP 269
Query: 178 AIIFIDELDAIAPKR 222
+++FI + + K+
Sbjct: 270 SVVFIGDAERTFVKK 284
>SB_25516| Best HMM Match : AAA_2 (HMM E-Value=0)
Length = 609
Score = 39.1 bits (87), Expect = 0.003
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Frame = +1
Query: 4 ILMYGPPGTGKTLIARAVANETGAFFFLINGPEI-MSKLAGES-ESNLRKAFEEA----D 165
IL+ GP G+GKTL+A+ +A F + + + + GE ES + K +EA +
Sbjct: 273 ILLLGPTGSGKTLLAQTIARCLDVPFAICDCTALTQAGYVGEDIESVIAKLLQEAGGNVE 332
Query: 166 KNSPAIIFIDELDAI 210
K I+F+DE+D I
Sbjct: 333 KAQQGIVFLDEVDKI 347
>SB_3478| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 62
Score = 38.3 bits (85), Expect = 0.004
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +3
Query: 366 RFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLEQ 476
R DR+I+ +PD + I IHT+ M L +DV+LE+
Sbjct: 2 RIDRKIEFPMPDEKTKRRIFNIHTQRMTLAEDVNLEE 38
>SB_31892| Best HMM Match : AAA (HMM E-Value=6.2e-25)
Length = 420
Score = 35.9 bits (79), Expect = 0.023
Identities = 23/78 (29%), Positives = 40/78 (51%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G L+YGPPG GK+ +A+A E ++N + ++ L A + S
Sbjct: 224 GYLLYGPPGCGKSSFIQALAGELDYSICVMNLSD-----RSLTDDRLNHLMSVAPQQS-- 276
Query: 181 IIFIDELDAIAPKREKTH 234
II ++++DA KR++T+
Sbjct: 277 IILLEDIDAAFVKRDETN 294
Score = 35.5 bits (78), Expect = 0.031
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = +3
Query: 258 SQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHT 437
S LL +DG+ S +V TN +DPAL R GR D + +I D R +++R+
Sbjct: 310 SGLLNTLDGVASSEERVVFMTTNHLKRLDPALIRPGRVDFKQEI---DWASRSQLVRMFA 366
Query: 438 K 440
+
Sbjct: 367 R 367
>SB_11032| Best HMM Match : AAA (HMM E-Value=3.5)
Length = 111
Score = 35.1 bits (77), Expect = 0.041
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 121 GESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGEVERRM 255
GE E +R F A PA+IF+DE+D++ +R E RR+
Sbjct: 2 GEGEKMVRAMFAVARCYLPAVIFMDEIDSLLTQRTDGEHEASRRI 46
>SB_59437| Best HMM Match : AAA (HMM E-Value=7.4e-08)
Length = 568
Score = 32.3 bits (70), Expect = 0.29
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +1
Query: 7 LMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 114
L+ GPPG GKT A V E G + +N + SK
Sbjct: 275 LLSGPPGVGKTTTATLVCQELGYSYVEMNASDARSK 310
>SB_54124| Best HMM Match : AAA (HMM E-Value=7.8e-08)
Length = 251
Score = 32.3 bits (70), Expect = 0.29
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Frame = +1
Query: 4 ILMYGPPGTGKTLIARAVA---NETGAF----FFLINGPEIMSKLAGESESNLRKAFEEA 162
++ G PGTGKT +AR +A +E G + ++ + GE+ + + A + A
Sbjct: 16 VMFVGNPGTGKTTMARMMAGILHEAGVIKRNKVIEVQRTALVGRYIGETGTKTKGAIDRA 75
Query: 163 DKNSPAIIFIDELDAIAPKREKTHG 237
K S ++ IDE ++ + +K +G
Sbjct: 76 -KGS--VLLIDEAYRLSSESDKNYG 97
>SB_26897| Best HMM Match : AAA (HMM E-Value=4.2e-12)
Length = 230
Score = 31.5 bits (68), Expect = 0.51
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +1
Query: 4 ILMYGPPGTGKTLIARAVANE 66
+L YGPPGTGKT AVA +
Sbjct: 13 LLFYGPPGTGKTSTILAVAKQ 33
>SB_21493| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 306
Score = 31.5 bits (68), Expect = 0.51
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +1
Query: 4 ILMYGPPGTGKTLIARAVANETG--AFFFLINGPEIMSKLAGESES 135
+L+ G PGTGKT IA +A G F I G EI S ++E+
Sbjct: 172 VLIAGQPGTGKTAIAMGMAQSLGPDTPFTSIAGSEIFSLEMSKTEA 217
>SB_57268| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 912
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = +3
Query: 318 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLGDDV 464
+T R N +DP +RR R + +I IP T + ++L +IHTK +G+ +
Sbjct: 348 STKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIGERI 401
>SB_51808| Best HMM Match : OmpA (HMM E-Value=0.72)
Length = 516
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = +3
Query: 318 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLGDDV 464
+T R N +DP +RR R + +I IP T + ++L +IHTK +G+ +
Sbjct: 355 STKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIGERI 408
>SB_46519| Best HMM Match : DUF720 (HMM E-Value=0.49)
Length = 1205
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = +3
Query: 318 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLGDDV 464
+T R N +DP +RR R + +I IP T + ++L +IHTK +G+ +
Sbjct: 273 STKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIGERI 326
>SB_44158| Best HMM Match : OmpA (HMM E-Value=0.72)
Length = 406
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = +3
Query: 318 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLGDDV 464
+T R N +DP +RR R + +I IP T + ++L +IHTK +G+ +
Sbjct: 349 STKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIGERI 402
>SB_42682| Best HMM Match : OmpA (HMM E-Value=0.72)
Length = 296
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = +3
Query: 318 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLGDDV 464
+T R N +DP +RR R + +I IP T + ++L +IHTK +G+ +
Sbjct: 65 STKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIGERI 118
>SB_25694| Best HMM Match : RVT_1 (HMM E-Value=1.9e-22)
Length = 1797
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = +3
Query: 318 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLGDDV 464
+T R N +DP +RR R + +I IP T + ++L +IHTK +G+ +
Sbjct: 283 STKRKNPMDPVIRRRERRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIGERI 336
>SB_10656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1931
Score = 29.5 bits (63), Expect = 2.0
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +1
Query: 28 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDE 198
+GKTLIARA NE A E+M K A E + KA + A ++ + ++E
Sbjct: 1655 SGKTLIARAGENEGNA--------EVMGKTADELKEKATKAAQNATESKTKALKLEE 1703
>SB_4259| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 540
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = +3
Query: 318 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLGDDV 464
+T R N +DP +RR R + +I IP T + ++L +IHTK +G+ +
Sbjct: 413 STKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIGERI 466
>SB_42068| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3367
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 13 YGPPGTGKTLIARAVANETGAFFFLINGPE 102
+GP GTGKT +A+ + G F + N E
Sbjct: 1854 FGPAGTGKTESVKALGQQLGRFVLVFNCDE 1883
>SB_36695| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 412
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = +3
Query: 318 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLGDDV 464
+T R N +DP +RR R + +I IP T + ++L +IHTK +G+ +
Sbjct: 355 STKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIGERI 408
>SB_19755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 621
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = +3
Query: 318 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLGDDV 464
+T R N +DP +RR R + +I IP T + ++L +IHTK +G+ +
Sbjct: 283 STKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIGERI 336
>SB_16760| Best HMM Match : OmpA (HMM E-Value=0.72)
Length = 933
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = +3
Query: 318 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLGDDV 464
+T R N +DP +RR R + +I IP T + ++L +IHTK +G+ +
Sbjct: 355 STKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIGERI 408
>SB_15796| Best HMM Match : RVT_1 (HMM E-Value=0.00082)
Length = 1304
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = +3
Query: 318 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLGDDV 464
+T R N +DP +RR R + +I IP T + ++L +IHTK +G+ +
Sbjct: 702 STKRKNPMDPVIRRRERRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIGERI 755
>SB_10418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 7 LMYGPPGTGKTLIARAVANETG 72
L+ GPPG GKT +A +A G
Sbjct: 384 LLCGPPGLGKTTLAHVIAQHAG 405
>SB_32582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1151
Score = 28.7 bits (61), Expect = 3.6
Identities = 19/84 (22%), Positives = 39/84 (46%)
Frame = +3
Query: 216 KERENPR*SGKTYVSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGI 395
KE E + + ++S + +L+D S + + T+R N + +LRR G ++ ++
Sbjct: 210 KETETEQETQNEFISLIKSLLDSPPAKSGSLKIILTSRANVEEQSLRRSGFSEKVVEKWD 269
Query: 396 PDATGRLEILRIHTKNMKLGDDVD 467
+ + I R K D++D
Sbjct: 270 TETSKSFMIERSRYPIQKAEDEMD 293
>SB_24190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 202
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -3
Query: 279 PLASITVKHTSFHFTVGFLSLWCNSIEFINEDNSRRVL 166
P+A + T H TV LS+W +++ N D R V+
Sbjct: 107 PIAYFRLDGTDQHVTVLPLSMWVHAVATFNRDTRRSVI 144
>SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0)
Length = 2065
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGE 126
G+L+ GP G+GKT + VA+ G PEIM G+
Sbjct: 120 GVLLEGPVGSGKTCLVEHVASMCGR----STPPEIMKVQLGD 157
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 4 ILMYGPPGTGKTLIARAVANETGAFFFLIN 93
IL+ G PG GKT + A+A +G IN
Sbjct: 1620 ILLEGSPGVGKTSLVSAIAKASGHELVRIN 1649
>SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2193
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 372 DREID-IGIPDATGRLEILRIHTKNMKLGDDVD 467
+RE+D G DA R E++ + TKN L DVD
Sbjct: 111 NRELDGKGTSDADLRKEVIELRTKNKTLERDVD 143
>SB_380| Best HMM Match : AAA (HMM E-Value=0.14)
Length = 508
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 4 ILMYGPPGTGKTLIARAVANETGAF 78
+++ GP G GKTL R +A + G F
Sbjct: 122 LMIVGPKGAGKTLHGRELARKLGLF 146
>SB_13937| Best HMM Match : zf-CCCH (HMM E-Value=0.0017)
Length = 1495
Score = 27.5 bits (58), Expect = 8.2
Identities = 9/21 (42%), Positives = 17/21 (80%)
Frame = +1
Query: 4 ILMYGPPGTGKTLIARAVANE 66
I++ GPPG+GKT +A+ + ++
Sbjct: 1252 IILRGPPGSGKTHVAKLIKDK 1272
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,977,760
Number of Sequences: 59808
Number of extensions: 295332
Number of successful extensions: 1061
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1048
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1361520496
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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