Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20175
(572 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g53230.1 68416.m05865 cell division cycle protein 48, putativ... 164 3e-41
At5g03340.1 68418.m00286 cell division cycle protein 48, putativ... 162 1e-40
At3g09840.1 68416.m01174 cell division cycle protein 48 (CDC48A)... 162 1e-40
At3g56690.1 68416.m06306 calmodulin-binding protein identical to... 100 6e-22
At5g42270.1 68418.m05145 FtsH protease, putative similar to FtsH... 100 1e-21
At2g03670.1 68415.m00326 AAA-type ATPase family protein contains... 100 1e-21
At1g50250.1 68414.m05634 cell division protein ftsH homolog 1, c... 99 2e-21
At3g01610.1 68416.m00092 AAA-type ATPase family protein contains... 96 1e-20
At5g15250.1 68418.m01786 FtsH protease, putative similar to FtsH... 95 2e-20
At5g58870.1 68418.m07376 FtsH protease, putative contains simila... 95 3e-20
At3g47060.1 68416.m05110 FtsH protease, putative contains simila... 95 4e-20
At2g30950.1 68415.m03775 FtsH protease (VAR2) identical to zinc ... 93 2e-19
At1g03000.1 68414.m00271 AAA-type ATPase family protein contains... 92 2e-19
At1g06430.1 68414.m00680 FtsH protease, putative similar to zinc... 90 1e-18
At4g29040.1 68417.m04153 26S proteasome AAA-ATPase subunit (RPT2... 89 2e-18
At3g02450.1 68416.m00232 cell division protein ftsH, putative si... 88 3e-18
At5g58290.1 68418.m07297 26S proteasome AAA-ATPase subunit (RPT3... 88 4e-18
At1g05910.1 68414.m00620 cell division cycle protein 48-related ... 87 6e-18
At4g23940.1 68417.m03443 FtsH protease, putative contains simila... 87 1e-17
At2g20140.1 68415.m02353 26S protease regulatory complex subunit... 86 1e-17
At4g28000.1 68417.m04016 AAA-type ATPase family protein contains... 85 3e-17
At3g05530.1 68416.m00606 26S proteasome AAA-ATPase subunit (RPT5... 85 3e-17
At3g15120.1 68416.m01913 AAA-type ATPase family protein contains... 84 6e-17
At1g09100.1 68414.m01016 26S protease regulatory subunit 6A, put... 84 6e-17
At1g64110.2 68414.m07264 AAA-type ATPase family protein contains... 84 7e-17
At1g64110.1 68414.m07263 AAA-type ATPase family protein contains... 84 7e-17
At5g53170.1 68418.m06610 FtsH protease, putative similar to ATP-... 83 1e-16
At2g45500.1 68415.m05659 AAA-type ATPase family protein similar ... 83 2e-16
At5g20000.1 68418.m02380 26S proteasome AAA-ATPase subunit, puta... 82 2e-16
At5g19990.1 68418.m02379 26S proteasome AAA-ATPase subunit (RPT6a) 82 2e-16
At4g02480.1 68417.m00335 AAA-type ATPase family protein contains... 82 3e-16
At1g02890.1 68414.m00256 AAA-type ATPase family protein contains... 82 3e-16
At3g16290.1 68416.m02056 FtsH protease, putative contains simila... 81 4e-16
At1g53750.1 68414.m06115 26S proteasome AAA-ATPase subunit (RPT1... 81 4e-16
At1g50140.1 68414.m05623 AAA-type ATPase family protein contains... 81 5e-16
At5g64580.1 68418.m08116 AAA-type ATPase family protein similar ... 81 7e-16
At3g27120.1 68416.m03393 spastin ATPase, putative similar to SWI... 81 7e-16
At2g34560.2 68415.m04246 katanin, putative similar to katanin p6... 81 7e-16
At2g34560.1 68415.m04245 katanin, putative similar to katanin p6... 81 7e-16
At1g53780.1 68414.m06120 26S proteasome AAA-ATPase subunit, puta... 81 7e-16
At4g24860.1 68417.m03559 AAA-type ATPase family protein contains... 80 9e-16
At2g27600.1 68415.m03346 AAA-type ATPase family protein / vacuol... 80 9e-16
At4g27680.1 68417.m03980 MSP1 protein, putative / intramitochond... 80 1e-15
At4g04910.1 68417.m00714 AAA-type ATPase family protein similar ... 80 1e-15
At3g19740.1 68416.m02499 AAA-type ATPase family protein contains... 80 1e-15
At1g80350.1 68414.m09406 katanin 1 (KTN1) identical to katanin 1... 80 1e-15
At2g29080.1 68415.m03535 FtsH protease, putative similar to AAA-... 79 2e-15
At5g53540.1 68418.m06653 MSP1 protein, putative / intramitochond... 79 2e-15
At5g08470.1 68418.m00999 peroxisome biogenesis protein (PEX1) id... 79 2e-15
At1g07510.1 68414.m00804 FtsH protease, putative similar to AAA-... 79 2e-15
At2g26140.1 68415.m03137 FtsH protease, putative contains simila... 79 3e-15
At1g45000.1 68414.m05158 26S proteasome regulatory complex subun... 79 3e-15
At5g43010.1 68418.m05245 26S proteasome AAA-ATPase subunit (RPT4... 78 4e-15
At1g79560.1 68414.m09275 FtsH protease, putative contains simila... 69 3e-12
At4g04180.1 68417.m00593 AAA-type ATPase family protein contains... 68 4e-12
At1g62130.1 68414.m07010 AAA-type ATPase family protein contains... 64 5e-11
At4g36580.1 68417.m05193 AAA-type ATPase family protein contains... 60 8e-10
At2g18330.1 68415.m02136 AAA-type ATPase family protein contains... 60 8e-10
At5g16930.1 68418.m01984 AAA-type ATPase family protein contains... 60 1e-09
At3g03060.1 68416.m00302 AAA-type ATPase family protein contains... 58 3e-09
At3g04340.1 68416.m00459 FtsH protease family protein similar to... 52 4e-07
At5g53350.1 68418.m06630 ATP-dependent Clp protease ATP-binding ... 44 1e-04
At1g33360.1 68414.m04129 ATP-dependent Clp protease ATP-binding ... 41 5e-04
At5g57480.1 68418.m07183 AAA-type ATPase family protein contains... 40 0.001
At4g30250.1 68417.m04301 AAA-type ATPase family protein contains... 40 0.001
At5g49840.1 68418.m06172 ATP-dependent Clp protease ATP-binding ... 38 0.005
At4g25835.1 68417.m03716 AAA-type ATPase family protein contains... 37 0.008
At5g17730.1 68418.m02079 AAA-type ATPase family protein contains... 37 0.011
At3g50930.1 68416.m05576 AAA-type ATPase family protein contains... 37 0.011
At5g50920.1 68418.m06315 ATP-dependent Clp protease ATP-binding ... 36 0.019
At4g24710.1 68417.m03536 AAA-type ATPase family protein similar ... 36 0.019
At5g67630.1 68418.m08527 DNA helicase, putative similar to RuvB-... 36 0.025
At3g28610.1 68416.m03571 AAA-type ATPase family protein contains... 36 0.025
At4g05380.1 68417.m00820 AAA-type ATPase family protein contains... 35 0.034
At3g49830.1 68416.m05448 DNA helicase-related similar to DNA hel... 35 0.034
At3g48870.1 68416.m05338 ATP-dependent Clp protease ATP-binding ... 35 0.034
At3g28510.1 68416.m03561 AAA-type ATPase family protein contains... 35 0.034
At5g40000.1 68418.m04851 AAA-type ATPase family protein BCS1 nuc... 35 0.044
At5g22330.1 68418.m02605 TATA box-binding protein-interacting pr... 35 0.044
At3g50940.1 68416.m05577 AAA-type ATPase family protein contains... 35 0.044
At1g43910.1 68414.m05066 AAA-type ATPase family protein contains... 35 0.044
At5g17760.2 68418.m02083 AAA-type ATPase family protein contains... 34 0.059
At5g17760.1 68418.m02082 AAA-type ATPase family protein contains... 34 0.059
At5g17740.1 68418.m02080 AAA-type ATPase family protein h-bcs1, ... 34 0.059
At3g28600.1 68416.m03570 AAA-type ATPase family protein contains... 34 0.059
At3g28570.1 68416.m03567 AAA-type ATPase family protein contains... 34 0.077
At2g18193.1 68415.m02117 AAA-type ATPase family protein contains... 34 0.077
At2g18190.1 68415.m02116 AAA-type ATPase family protein contains... 34 0.077
At1g21690.2 68414.m02715 replication factor C 37 kDa, putative S... 33 0.10
At1g21690.1 68414.m02714 replication factor C 37 kDa, putative S... 33 0.10
At3g28580.1 68416.m03568 AAA-type ATPase family protein contains... 33 0.14
At3g28520.1 68416.m03562 AAA-type ATPase family protein contains... 33 0.14
At5g40010.1 68418.m04852 AAA-type ATPase family protein contains... 32 0.24
At3g28540.1 68416.m03564 AAA-type ATPase family protein contains... 32 0.24
At3g20410.1 68416.m02585 calmodulin-domain protein kinase isofor... 32 0.24
At1g24290.1 68414.m03065 AAA-type ATPase family protein similar ... 32 0.24
At4g21880.1 68417.m03164 pentatricopeptide (PPR) repeat-containi... 32 0.31
At1g77470.1 68414.m09021 replication factor C 36 kDA, putative s... 32 0.31
At1g67120.1 68414.m07636 midasin-related similar to Midasin (MID... 32 0.31
At5g11250.1 68418.m01314 disease resistance protein (TIR-NBS-LRR... 31 0.41
At3g05780.1 68416.m00649 Lon protease, putative similar to Lon p... 31 0.41
At3g24530.1 68416.m03080 AAA-type ATPase family protein / ankyri... 31 0.55
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 31 0.55
At4g08450.1 68417.m01393 disease resistance protein (TIR-NBS-LRR... 27 0.68
At5g26860.1 68418.m03204 Lon protease homolog 2, mitochondrial a... 31 0.72
At5g17750.1 68418.m02081 AAA-type ATPase family protein contains... 31 0.72
At3g49210.1 68416.m05378 expressed protein 31 0.72
At2g39730.3 68415.m04879 ribulose bisphosphate carboxylase/oxyge... 31 0.72
At2g39730.2 68415.m04878 ribulose bisphosphate carboxylase/oxyge... 31 0.72
At2g39730.1 68415.m04877 ribulose bisphosphate carboxylase/oxyge... 31 0.72
At3g04220.1 68416.m00446 disease resistance protein (TIR-NBS-LRR... 30 0.95
At3g44630.3 68416.m04798 disease resistance protein RPP1-WsB-lik... 30 1.3
At3g44630.2 68416.m04800 disease resistance protein RPP1-WsB-lik... 30 1.3
At3g44630.1 68416.m04799 disease resistance protein RPP1-WsB-lik... 30 1.3
At2g34440.1 68415.m04225 MADS-box family protein similar to SP|Q... 30 1.3
At3g44480.1 68416.m04781 disease resistance protein (TIR-NBS-LRR... 29 1.7
At1g73170.1 68414.m08466 expressed protein 29 1.7
At1g71320.1 68414.m08232 S locus F-box-related / SLF-related con... 29 1.7
At1g04730.1 68414.m00469 AAA-type ATPase family protein contains... 29 1.7
At5g58120.1 68418.m07272 disease resistance protein (TIR-NBS-LRR... 29 2.2
At5g51070.1 68418.m06330 ATP-dependent Clp protease ATP-binding ... 29 2.2
At5g40910.1 68418.m04967 disease resistance protein (TIR-NBS-LRR... 29 2.2
At5g22010.1 68418.m02561 AAA-type ATPase family protein / BRCT d... 29 2.2
At5g18350.1 68418.m02159 disease resistance protein (TIR-NBS-LRR... 29 2.2
At2g41860.2 68415.m05174 calcium-dependent protein kinase, putat... 29 2.2
At2g41860.1 68415.m05173 calcium-dependent protein kinase, putat... 29 2.2
At2g14080.1 68415.m01566 disease resistance protein (TIR-NBS-LRR... 29 2.2
At5g41540.1 68418.m05048 disease resistance protein (TIR-NBS-LRR... 29 2.9
At3g25510.1 68416.m03172 disease resistance protein (TIR-NBS-LRR... 29 2.9
At1g50700.1 68414.m05701 calcium-dependent protein kinase, putat... 29 2.9
At1g06720.1 68414.m00714 expressed protein contains Pfam domain,... 29 2.9
At5g41750.2 68418.m05081 disease resistance protein (TIR-NBS-LRR... 28 3.8
At5g41750.1 68418.m05080 disease resistance protein (TIR-NBS-LRR... 28 3.8
At5g41550.1 68418.m05049 disease resistance protein (TIR-NBS-LRR... 28 3.8
At4g11170.1 68417.m01809 disease resistance protein (TIR-NBS-LRR... 28 3.8
At2g46620.1 68415.m05815 AAA-type ATPase family protein contains... 28 3.8
At1g63160.1 68414.m07138 replication factor C 40 kDa, putative s... 28 3.8
At1g05990.1 68414.m00627 calcium-binding protein, putative stron... 28 3.8
At5g44320.1 68418.m05427 eukaryotic translation initiation facto... 28 5.1
At5g38340.1 68418.m04627 disease resistance protein (TIR-NBS-LRR... 28 5.1
At3g05790.1 68416.m00650 Lon protease, putative similar to Lon p... 28 5.1
At1g61950.1 68414.m06988 calcium-dependent protein kinase, putat... 28 5.1
At1g13280.1 68414.m01542 allene oxide cyclase family protein sim... 28 5.1
At5g47010.1 68418.m05794 RNA helicase, putative similar to type ... 27 6.7
At5g18360.1 68418.m02160 disease resistance protein (TIR-NBS-LRR... 27 6.7
At5g13360.1 68418.m01539 auxin-responsive GH3 family protein sim... 27 6.7
At4g15570.1 68417.m02379 tRNA-splicing endonuclease positive eff... 27 6.7
At3g30842.1 68416.m03968 ABC transporter protein, putative simil... 27 6.7
At1g63740.1 68414.m07213 disease resistance protein (TIR-NBS-LRR... 27 6.7
At5g47040.1 68418.m05797 Lon protease homolog 1, mitochondrial (... 27 8.9
At5g20490.1 68418.m02435 myosin, putative similar to myosin (GI:... 27 8.9
At5g18370.1 68418.m02161 disease resistance protein (TIR-NBS-LRR... 27 8.9
At4g30100.1 68417.m04280 tRNA-splicing endonuclease positive eff... 27 8.9
At2g26930.1 68415.m03230 4-diphosphocytidyl-2-C-methyl-D-erythri... 27 8.9
At2g22620.1 68415.m02681 expressed protein 27 8.9
>At3g53230.1 68416.m05865 cell division cycle protein 48, putative /
CDC48, putative very strong similarity to SP|P54609 Cell
division cycle protein 48 homolog {Arabidopsis
thaliana}; contains Pfam profiles PF00004: ATPase AAA
family, PF02359: Cell division protein 48 (CDC48)
N-terminal domain
Length = 815
Score = 164 bits (399), Expect = 3e-41
Identities = 76/85 (89%), Positives = 84/85 (98%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
GIL+YGPPG+GKTLIARAVANETGAFFF INGPEIMSKLAGESESNLRKAFEEA+KN+P+
Sbjct: 244 GILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPS 303
Query: 181 IIFIDELDAIAPKREKTHGEVERRM 255
IIFIDE+D+IAPKREKTHGEVERR+
Sbjct: 304 IIFIDEIDSIAPKREKTHGEVERRI 328
Score = 162 bits (393), Expect = 2e-40
Identities = 76/106 (71%), Positives = 90/106 (84%)
Frame = +3
Query: 255 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 434
VSQLLTLMDG+K +HVIVM ATNRPNSIDPALRRFGRFDREIDIG+PD GRLE+LRIH
Sbjct: 329 VSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIH 388
Query: 435 TKNMKLGDDVDLEQIAAESHGHVGAISRXLCSEAALQQILRRWILI 572
TKNMKL +DVDLE+++ ++HG+VGA LC+EAALQ I + +I
Sbjct: 389 TKNMKLAEDVDLERVSKDTHGYVGADLAALCTEAALQCIREKMDVI 434
Score = 93.9 bits (223), Expect = 7e-20
Identities = 40/80 (50%), Positives = 61/80 (76%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G+L YGPPG GKTL+A+A+ANE A F I GPE+++ GESE+N+R+ F++A +++P
Sbjct: 517 GVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPC 576
Query: 181 IIFIDELDAIAPKREKTHGE 240
++F DELD+IA +R + G+
Sbjct: 577 VLFFDELDSIATQRGNSVGD 596
Score = 73.3 bits (172), Expect = 1e-13
Identities = 38/94 (40%), Positives = 53/94 (56%)
Frame = +3
Query: 255 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 434
++QLLT MDGM V ++ ATNRP+ IDPAL R GR D+ I I +PD R +I +
Sbjct: 605 LNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQIFKSC 664
Query: 435 TKNMKLGDDVDLEQIAAESHGHVGAISRXLCSEA 536
+ + DVDL +A + G GA +C +
Sbjct: 665 LRKSPVAKDVDLRALAKYTQGFSGADITEICQRS 698
>At5g03340.1 68418.m00286 cell division cycle protein 48, putative /
CDC48, putative very strong similarity to SP|P54609 Cell
division cycle protein 48 homolog {Arabidopsis
thaliana}; contains Pfam profiles PF00004: ATPase AAA
family, PF02359: Cell division protein 48 (CDC48)
N-terminal domain; supporting cDNA
gi|26449351|dbj|AK117125.1|
Length = 810
Score = 162 bits (394), Expect = 1e-40
Identities = 77/106 (72%), Positives = 90/106 (84%)
Frame = +3
Query: 255 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 434
VSQLLTLMDG+K +HVIVM ATNRPNSIDPALRRFGRFDREIDIG+PD GRLE+LRIH
Sbjct: 328 VSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIH 387
Query: 435 TKNMKLGDDVDLEQIAAESHGHVGAISRXLCSEAALQQILRRWILI 572
TKNMKL +DVDLE+I+ ++HG+VGA LC+EAALQ I + +I
Sbjct: 388 TKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVI 433
Score = 161 bits (392), Expect = 2e-40
Identities = 75/85 (88%), Positives = 84/85 (98%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
GIL+YGPPG+GKTLIARAVANETGAFFF INGPEIMSKLAGESESNLRKAFEEA+KN+P+
Sbjct: 243 GILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPS 302
Query: 181 IIFIDELDAIAPKREKTHGEVERRM 255
IIFIDE+D+IAPKREKT+GEVERR+
Sbjct: 303 IIFIDEIDSIAPKREKTNGEVERRI 327
Score = 93.9 bits (223), Expect = 7e-20
Identities = 39/80 (48%), Positives = 61/80 (76%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G+L YGPPG GKTL+A+A+ANE A F + GPE+++ GESE+N+R+ F++A +++P
Sbjct: 516 GVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPC 575
Query: 181 IIFIDELDAIAPKREKTHGE 240
++F DELD+IA +R + G+
Sbjct: 576 VLFFDELDSIATQRGNSAGD 595
Score = 71.3 bits (167), Expect = 4e-13
Identities = 38/94 (40%), Positives = 52/94 (55%)
Frame = +3
Query: 255 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 434
++QLLT MDGM V ++ ATNRP+ ID AL R GR D+ I I +PD RL I +
Sbjct: 604 LNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAC 663
Query: 435 TKNMKLGDDVDLEQIAAESHGHVGAISRXLCSEA 536
+ + DVD+ +A + G GA +C A
Sbjct: 664 LRKSPVAKDVDVTALAKYTQGFSGADITEICQRA 697
>At3g09840.1 68416.m01174 cell division cycle protein 48 (CDC48A)
(CDC48) identical to SP|P54609 Cell division cycle
protein 48 homolog {Arabidopsis thaliana}
Length = 809
Score = 162 bits (394), Expect = 1e-40
Identities = 77/106 (72%), Positives = 90/106 (84%)
Frame = +3
Query: 255 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 434
VSQLLTLMDG+K +HVIVM ATNRPNSIDPALRRFGRFDREIDIG+PD GRLE+LRIH
Sbjct: 328 VSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIH 387
Query: 435 TKNMKLGDDVDLEQIAAESHGHVGAISRXLCSEAALQQILRRWILI 572
TKNMKL +DVDLE+I+ ++HG+VGA LC+EAALQ I + +I
Sbjct: 388 TKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVI 433
Score = 161 bits (392), Expect = 2e-40
Identities = 75/85 (88%), Positives = 84/85 (98%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
GIL+YGPPG+GKTLIARAVANETGAFFF INGPEIMSKLAGESESNLRKAFEEA+KN+P+
Sbjct: 243 GILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPS 302
Query: 181 IIFIDELDAIAPKREKTHGEVERRM 255
IIFIDE+D+IAPKREKT+GEVERR+
Sbjct: 303 IIFIDEIDSIAPKREKTNGEVERRI 327
Score = 91.9 bits (218), Expect = 3e-19
Identities = 38/74 (51%), Positives = 58/74 (78%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G+L YGPPG GKTL+A+A+ANE A F + GPE+++ GESE+N+R+ F++A +++P
Sbjct: 516 GVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPC 575
Query: 181 IIFIDELDAIAPKR 222
++F DELD+IA +R
Sbjct: 576 VLFFDELDSIATQR 589
Score = 72.1 bits (169), Expect = 2e-13
Identities = 38/94 (40%), Positives = 52/94 (55%)
Frame = +3
Query: 255 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 434
++QLLT MDGM V ++ ATNRP+ ID AL R GR D+ I I +PD RL I +
Sbjct: 605 LNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAA 664
Query: 435 TKNMKLGDDVDLEQIAAESHGHVGAISRXLCSEA 536
+ + DVD+ +A + G GA +C A
Sbjct: 665 LRKSPIAKDVDIGALAKYTQGFSGADITEICQRA 698
>At3g56690.1 68416.m06306 calmodulin-binding protein identical to
calmodulin-binding protein GI:6760428 from [Arabidopsis
thaliana]
Length = 1022
Score = 100 bits (240), Expect = 6e-22
Identities = 50/96 (52%), Positives = 69/96 (71%), Gaps = 1/96 (1%)
Frame = +3
Query: 255 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 434
V+ LL LMDG+ ++ V+V+AATNRP+SI+PALRR GR DREI+IG+P +T R +IL I
Sbjct: 505 VATLLNLMDGISRTDGVVVIAATNRPDSIEPALRRPGRLDREIEIGVPSSTQRSDILHII 564
Query: 435 TKNMKLG-DDVDLEQIAAESHGHVGAISRXLCSEAA 539
+ M+ ++ +EQ+A +HG VGA LC EAA
Sbjct: 565 LRGMRHSLSNIQVEQLAMATHGFVGADLSALCCEAA 600
Score = 98.7 bits (235), Expect = 2e-21
Identities = 44/85 (51%), Positives = 61/85 (71%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G+L++GPPGTGKT +AR A +G FF +NGPEI+S+ GESE L + F A +PA
Sbjct: 420 GVLIHGPPGTGKTSLARTFARHSGVNFFSVNGPEIISQYLGESEKALDEVFRSASNATPA 479
Query: 181 IIFIDELDAIAPKREKTHGEVERRM 255
++FID+LDAIAP R++ E+ +RM
Sbjct: 480 VVFIDDLDAIAPARKEGGEELSQRM 504
Score = 87.8 bits (208), Expect = 4e-18
Identities = 42/81 (51%), Positives = 55/81 (67%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
GILM+GPPG KTL+ARAVA+E F + GPE+ SK GESE +R F +A N+P+
Sbjct: 760 GILMFGPPGCSKTLMARAVASEAKLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPS 819
Query: 181 IIFIDELDAIAPKREKTHGEV 243
IIF DE+D++A R K + V
Sbjct: 820 IIFFDEIDSLASIRGKENDGV 840
Score = 84.2 bits (199), Expect = 6e-17
Identities = 42/96 (43%), Positives = 63/96 (65%)
Frame = +3
Query: 255 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 434
+SQLL +DG+ + V V+AATNRP+ ID AL R GRFDR + +G P+ T R IL+IH
Sbjct: 847 MSQLLVELDGLHQRVGVTVIAATNRPDKIDSALLRPGRFDRLLYVGPPNETDREAILKIH 906
Query: 435 TKNMKLGDDVDLEQIAAESHGHVGAISRXLCSEAAL 542
+ + D+ L+++A+ + G+ GA +C EAA+
Sbjct: 907 LRKIPCSSDICLKELASITKGYTGADISLICREAAI 942
>At5g42270.1 68418.m05145 FtsH protease, putative similar to FtsH
protease GI:13183728 from [Medicago sativa]
Length = 704
Score = 99.5 bits (237), Expect = 1e-21
Identities = 46/96 (47%), Positives = 68/96 (70%)
Frame = +3
Query: 255 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 434
++QLLT MDG +S VIV+AATNRP+ +D AL R GRFDR++ + PD GR++IL++H
Sbjct: 373 INQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVQILKVH 432
Query: 435 TKNMKLGDDVDLEQIAAESHGHVGAISRXLCSEAAL 542
++ +G DVD E++A + G GA + L +EAA+
Sbjct: 433 SRGKAIGKDVDYEKVARRTPGFTGADLQNLMNEAAI 468
Score = 77.4 bits (182), Expect = 6e-15
Identities = 36/74 (48%), Positives = 46/74 (62%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G L+ GPPGTGKTL+ARAVA E G FF E + G S +R FE+A +P
Sbjct: 285 GCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPC 344
Query: 181 IIFIDELDAIAPKR 222
I+FIDE+DA+ +R
Sbjct: 345 IVFIDEIDAVGRQR 358
>At2g03670.1 68415.m00326 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 603
Score = 99.5 bits (237), Expect = 1e-21
Identities = 49/98 (50%), Positives = 67/98 (68%)
Frame = +3
Query: 243 GKTYVSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEI 422
G+ +S LLT MDG++++ ++V+AATNRP +ID AL R GRFD + + PD R EI
Sbjct: 407 GERLLSTLLTEMDGLEEAKGILVLAATNRPYAIDAALMRPGRFDLVLYVPPPDLEARFEI 466
Query: 423 LRIHTKNMKLGDDVDLEQIAAESHGHVGAISRXLCSEA 536
L++HT+NM LGDDVDL +IA E+ GA LC E+
Sbjct: 467 LQVHTRNMTLGDDVDLRKIAEETDLFTGAELEGLCRES 504
Score = 93.5 bits (222), Expect = 9e-20
Identities = 48/98 (48%), Positives = 66/98 (67%), Gaps = 3/98 (3%)
Frame = +3
Query: 258 SQLLTLMDGMKKSS---HVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILR 428
SQL TLMD K SS V+V+A+TNR ++IDPALRR GRFD +++ P+ RL+IL+
Sbjct: 147 SQLFTLMDSNKPSSSAPRVVVVASTNRVDAIDPALRRAGRFDALVEVSTPNEEDRLKILQ 206
Query: 429 IHTKNMKLGDDVDLEQIAAESHGHVGAISRXLCSEAAL 542
++TK + L VDL+ IA +G+VGA LC EA +
Sbjct: 207 LYTKKVNLDPSVDLQAIAISCNGYVGADLEALCREATI 244
Score = 76.2 bits (179), Expect = 1e-14
Identities = 36/79 (45%), Positives = 52/79 (65%), Gaps = 4/79 (5%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNS-- 174
G+L+YGPPGTGKT + RAV E A +++ + AGESE LR+AF EA ++
Sbjct: 58 GLLLYGPPGTGKTSLVRAVVQECDAHLIVLSPHSVHRAHAGESEKVLREAFAEASSHAVS 117
Query: 175 --PAIIFIDELDAIAPKRE 225
P++IFIDE+D + P+R+
Sbjct: 118 DKPSVIFIDEIDVLCPRRD 136
Score = 74.9 bits (176), Expect = 3e-14
Identities = 36/74 (48%), Positives = 47/74 (63%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
GIL++GPPG KT +A+A AN A FF ++ E+ S GE E+ LR F+ A SP+
Sbjct: 322 GILLHGPPGCSKTTLAKAAANAAQASFFSLSCAELFSMYVGEGEALLRNTFQRARLASPS 381
Query: 181 IIFIDELDAIAPKR 222
IIF DE D +A KR
Sbjct: 382 IIFFDEADVVACKR 395
>At1g50250.1 68414.m05634 cell division protein ftsH homolog 1,
chloroplast (FTSH1) (FTSH) identical to SP:Q39102 Cell
division protein ftsH homolog 1, chloroplast
precursor (EC 3.4.24.-) [Arabidopsis thaliana]
Length = 716
Score = 98.7 bits (235), Expect = 2e-21
Identities = 46/96 (47%), Positives = 68/96 (70%)
Frame = +3
Query: 255 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 434
++QLLT MDG +S VIV+AATNRP+ +D AL R GRFDR++ + PD GR++IL++H
Sbjct: 385 INQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVH 444
Query: 435 TKNMKLGDDVDLEQIAAESHGHVGAISRXLCSEAAL 542
++ LG DVD +++A + G GA + L +EAA+
Sbjct: 445 SRGKALGKDVDFDKVARRTPGFTGADLQNLMNEAAI 480
Score = 77.4 bits (182), Expect = 6e-15
Identities = 36/74 (48%), Positives = 46/74 (62%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G L+ GPPGTGKTL+ARAVA E G FF E + G S +R FE+A +P
Sbjct: 297 GCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPC 356
Query: 181 IIFIDELDAIAPKR 222
I+FIDE+DA+ +R
Sbjct: 357 IVFIDEIDAVGRQR 370
>At3g01610.1 68416.m00092 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 820
Score = 96.3 bits (229), Expect = 1e-20
Identities = 42/85 (49%), Positives = 62/85 (72%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
GIL +GPPG GKT +A A+ANE G F+ I+ E++S ++G SE N+R+ F +A + +P+
Sbjct: 269 GILFHGPPGCGKTKLANAIANEAGVPFYKISATEVISGVSGASEENIRELFSKAYRTAPS 328
Query: 181 IIFIDELDAIAPKREKTHGEVERRM 255
I+FIDE+DAI KRE E+E+R+
Sbjct: 329 IVFIDEIDAIGSKRENQQREMEKRI 353
Score = 89.4 bits (212), Expect = 1e-18
Identities = 42/89 (47%), Positives = 56/89 (62%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G L+YGPPG GKTLIA+A ANE GA F I G E+++K GESE +R F+ A +P
Sbjct: 564 GFLLYGPPGCGKTLIAKAAANEAGANFMHIKGAELLNKYVGESELAIRTLFQRARTCAPC 623
Query: 181 IIFIDELDAIAPKREKTHGEVERRMFHSY 267
+IF DE+DA+ R K V R+ + +
Sbjct: 624 VIFFDEVDALTTSRGKEGAWVVERLLNQF 652
Score = 71.7 bits (168), Expect = 3e-13
Identities = 45/108 (41%), Positives = 62/108 (57%), Gaps = 11/108 (10%)
Frame = +3
Query: 219 ERENP-R*SGKTYVSQLLTLMDGM----------KKSSHVIVMAATNRPNSIDPALRRFG 365
+REN R K V+QLLT MDG + V+V+ ATNRP+++DPALRR G
Sbjct: 341 KRENQQREMEKRIVTQLLTCMDGPGNKGDKNAPDSSAGFVLVIGATNRPDALDPALRRSG 400
Query: 366 RFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLEQIAAESHGHVGA 509
RF+ EI + PD R EIL + + ++L D ++IA + G VGA
Sbjct: 401 RFETEIALTAPDEDARAEILSVVAQKLRLEGPFDKKRIARLTPGFVGA 448
Score = 56.4 bits (130), Expect = 1e-08
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Frame = +3
Query: 255 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 434
++Q L +DG ++ + V V+ ATNRP+ +DPA R GRF + + +P+A R IL+
Sbjct: 649 LNQFLVELDGGERRN-VYVIGATNRPDVVDPAFLRPGRFGNLLYVPLPNADERASILKAI 707
Query: 435 TKNMKLGDDVDLEQIAAES-HGHVGAISRXLCSEAALQQI 551
+ + VDL+ IA + G GA L +A Q +
Sbjct: 708 ARKKPIDPSVDLDGIAKNNCEGFSGADLAHLVQKATFQAV 747
>At5g15250.1 68418.m01786 FtsH protease, putative similar to
FtsH-like protein Pftf precursor GI:4325041 from
[Nicotiana tabacum]
Length = 687
Score = 95.5 bits (227), Expect = 2e-20
Identities = 47/96 (48%), Positives = 66/96 (68%)
Frame = +3
Query: 255 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 434
++Q+LT MDG ++ VIV+AATNRP +D AL R GRFDR++ +G+PD GR EIL++H
Sbjct: 346 LNQILTEMDGFAGNTGVIVIAATNRPEILDSALLRPGRFDRQVSVGLPDIRGREEILKVH 405
Query: 435 TKNMKLGDDVDLEQIAAESHGHVGAISRXLCSEAAL 542
+++ KL DV L IA + G GA L +EAA+
Sbjct: 406 SRSKKLDKDVSLSVIAMRTPGFSGADLANLMNEAAI 441
Score = 81.8 bits (193), Expect = 3e-16
Identities = 36/74 (48%), Positives = 48/74 (64%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G+L+ GPPGTGKTL+A+A+A E G FF ++G E + G S R F +A NSP
Sbjct: 258 GVLLTGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRARDLFNKAKANSPC 317
Query: 181 IIFIDELDAIAPKR 222
I+FIDE+DA+ R
Sbjct: 318 IVFIDEIDAVGRMR 331
>At5g58870.1 68418.m07376 FtsH protease, putative contains
similarity to cell division protein FtsH homolog 3
SP:P73437 (EC 3.4.24.-) [strain PCC6803] {Synechocystis
sp.}
Length = 806
Score = 95.1 bits (226), Expect = 3e-20
Identities = 51/98 (52%), Positives = 65/98 (66%), Gaps = 2/98 (2%)
Frame = +3
Query: 255 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 434
++QLLT MDG SS VIV+ ATNR + +DPALRR GRFDR + + PD GR IL++H
Sbjct: 453 LNQLLTEMDGFDSSSAVIVLGATNRADVLDPALRRPGRFDRVVTVESPDKVGRESILKVH 512
Query: 435 T--KNMKLGDDVDLEQIAAESHGHVGAISRXLCSEAAL 542
K + LGDDV+L IA+ + G GA L +EAAL
Sbjct: 513 VSKKELPLGDDVNLASIASMTTGFTGADLANLVNEAAL 550
Score = 72.1 bits (169), Expect = 2e-13
Identities = 34/75 (45%), Positives = 47/75 (62%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G+L+ G PGTGKTL+A+AVA E+ F + E + G S +R F A K +P+
Sbjct: 364 GVLLVGLPGTGKTLLAKAVAGESDVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPS 423
Query: 181 IIFIDELDAIAPKRE 225
IIFIDE+DA+A R+
Sbjct: 424 IIFIDEIDAVAKSRD 438
>At3g47060.1 68416.m05110 FtsH protease, putative contains
similarity to FtsH protease GI:13183728 from [Medicago
sativa]
Length = 802
Score = 94.7 bits (225), Expect = 4e-20
Identities = 51/98 (52%), Positives = 65/98 (66%), Gaps = 2/98 (2%)
Frame = +3
Query: 255 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 434
++QLLT MDG +S VIV+ ATNR + +DPALRR GRFDR + + PD GR ILR+H
Sbjct: 449 LNQLLTEMDGFDSNSAVIVLGATNRADVLDPALRRPGRFDRVVTVETPDKIGRESILRVH 508
Query: 435 T--KNMKLGDDVDLEQIAAESHGHVGAISRXLCSEAAL 542
K + LGDDV+L IA+ + G GA L +EAAL
Sbjct: 509 VSKKELPLGDDVNLGSIASMTTGFTGADLANLVNEAAL 546
Score = 71.3 bits (167), Expect = 4e-13
Identities = 34/75 (45%), Positives = 46/75 (61%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G+L+ G PGTGKTL+A+AVA E F + E + G S +R F A K +P+
Sbjct: 360 GVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPS 419
Query: 181 IIFIDELDAIAPKRE 225
IIFIDE+DA+A R+
Sbjct: 420 IIFIDEIDAVAKSRD 434
>At2g30950.1 68415.m03775 FtsH protease (VAR2) identical to zinc
dependent protease VAR2 GI:7650138 from [Arabidopsis
thaliana]
Length = 695
Score = 92.7 bits (220), Expect = 2e-19
Identities = 46/96 (47%), Positives = 65/96 (67%)
Frame = +3
Query: 255 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 434
++QLLT MDG + ++ VIV+AATNR + +D AL R GRFDR++ + +PD GR +IL++H
Sbjct: 350 LNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTDILKVH 409
Query: 435 TKNMKLGDDVDLEQIAAESHGHVGAISRXLCSEAAL 542
N K +DV LE IA + G GA L +EAA+
Sbjct: 410 AGNKKFDNDVSLEIIAMRTPGFSGADLANLLNEAAI 445
Score = 84.2 bits (199), Expect = 6e-17
Identities = 35/74 (47%), Positives = 52/74 (70%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G+L+ GPPGTGKTL+A+A+A E G FF I+G E + G S +R F++A +N+P
Sbjct: 262 GVLLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPC 321
Query: 181 IIFIDELDAIAPKR 222
I+F+DE+DA+ +R
Sbjct: 322 IVFVDEIDAVGRQR 335
>At1g03000.1 68414.m00271 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 941
Score = 92.3 bits (219), Expect = 2e-19
Identities = 40/74 (54%), Positives = 53/74 (71%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G+L+YGPPGTGKTL+A+AVA E F + GPE+++ GESE N+R FE+A P
Sbjct: 693 GVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFEKARSARPC 752
Query: 181 IIFIDELDAIAPKR 222
+IF DELD++AP R
Sbjct: 753 VIFFDELDSLAPAR 766
Score = 70.1 bits (164), Expect = 1e-12
Identities = 41/105 (39%), Positives = 63/105 (60%), Gaps = 3/105 (2%)
Frame = +3
Query: 255 VSQLLTLMDGMKKSSH-VIVMAATNRPNSIDPALRRFGRFDREIDIGI-PDATGRLEILR 428
VSQ+L +DG+ SS + ++ A+NRP+ IDPAL R GRFD+ + +G+ DA+ R +L+
Sbjct: 780 VSQMLAEIDGLSDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNADASYRERVLK 839
Query: 429 IHTKNMKLGDDVDLEQIAAESHG-HVGAISRXLCSEAALQQILRR 560
T+ KL +DV L +A + GA LC++A Q R+
Sbjct: 840 ALTRKFKLSEDVSLYSVAKKCPSTFTGADMYALCADAWFQAAKRK 884
>At1g06430.1 68414.m00680 FtsH protease, putative similar to zinc
dependent protease GI:7650138 from [Arabidopsis
thaliana]
Length = 685
Score = 89.8 bits (213), Expect = 1e-18
Identities = 45/96 (46%), Positives = 64/96 (66%)
Frame = +3
Query: 255 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 434
++QLLT MDG + ++ VIV+AATNR + +D AL R GRFDR++ + +PD GR +IL++H
Sbjct: 343 LNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTDILKVH 402
Query: 435 TKNMKLGDDVDLEQIAAESHGHVGAISRXLCSEAAL 542
+ N K V LE IA + G GA L +EAA+
Sbjct: 403 SGNKKFESGVSLEVIAMRTPGFSGADLANLLNEAAI 438
Score = 84.2 bits (199), Expect = 6e-17
Identities = 35/74 (47%), Positives = 52/74 (70%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G+L+ GPPGTGKTL+A+A+A E G FF I+G E + G S +R F++A +N+P
Sbjct: 255 GVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPC 314
Query: 181 IIFIDELDAIAPKR 222
I+F+DE+DA+ +R
Sbjct: 315 IVFVDEIDAVGRQR 328
>At4g29040.1 68417.m04153 26S proteasome AAA-ATPase subunit (RPT2a)
almost identical to 26S proteasome AAA-ATPase subunit
RPT2a (GI:6652880) {Arabidopsis thaliana}; Drosophila
melanogaster 26S proteasome subunit 4 ATPase,
PID:g1066065
Length = 443
Score = 89.0 bits (211), Expect = 2e-18
Identities = 40/85 (47%), Positives = 56/85 (65%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G+++YG PGTGKTL+A+AVAN T A F + G E++ K G+ +R+ F AD SP+
Sbjct: 224 GVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPS 283
Query: 181 IIFIDELDAIAPKREKTHGEVERRM 255
I+FIDE+DA+ KR H ER +
Sbjct: 284 IVFIDEIDAVGTKRYDAHSGGEREI 308
Score = 79.4 bits (187), Expect = 2e-15
Identities = 41/100 (41%), Positives = 56/100 (56%)
Frame = +3
Query: 261 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 440
+LL +DG V V+ ATNR S+DPAL R GR DR+I+ +PD R I +IHT
Sbjct: 314 ELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTS 373
Query: 441 NMKLGDDVDLEQIAAESHGHVGAISRXLCSEAALQQILRR 560
M L +DV+LE+ GA + +C+EA L + R
Sbjct: 374 KMTLSEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRER 413
>At3g02450.1 68416.m00232 cell division protein ftsH, putative
similar to SWISS-PROT:P46469 cell division protein ftsH
homolog [Lactococcus lactis]; contains Pfam domain,
PF00004: ATPase, AAA family ('A'TPases 'A'ssociated with
diverse cellular 'A'ctivities)
Length = 622
Score = 88.2 bits (209), Expect = 3e-18
Identities = 40/80 (50%), Positives = 53/80 (66%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G+L+ GPPGTGKTL+ARAVA E G FF ++ E + G + +R F A KNSP+
Sbjct: 369 GVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASEFVELFVGRGAARIRDLFNAARKNSPS 428
Query: 181 IIFIDELDAIAPKREKTHGE 240
IIFIDELDA+ KR ++ +
Sbjct: 429 IIFIDELDAVGGKRGRSFND 448
Score = 80.6 bits (190), Expect = 7e-16
Identities = 44/98 (44%), Positives = 65/98 (66%), Gaps = 2/98 (2%)
Frame = +3
Query: 255 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 434
++QLLT MDG + + VIV+AATNRP ++D AL R GRF R++ + PD GR +IL IH
Sbjct: 454 LNQLLTEMDGFESDTKVIVIAATNRPEALDSALCRPGRFSRKVLVAEPDQEGRRKILAIH 513
Query: 435 TKNMKLGDDVDL--EQIAAESHGHVGAISRXLCSEAAL 542
+++ L +D L + +A+ + G VGA + +EAAL
Sbjct: 514 LRDVPLEEDAFLICDLVASLTPGFVGADLANIVNEAAL 551
>At5g58290.1 68418.m07297 26S proteasome AAA-ATPase subunit (RPT3)
identical to 26S proteasome AAA-ATPase subunit RPT3
GI:6652882 from [Arabidopsis thaliana]
Length = 408
Score = 87.8 bits (208), Expect = 4e-18
Identities = 41/74 (55%), Positives = 52/74 (70%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G+L+YGPPGTGKT++A+AVAN T A F + G E + K GE +R F A +N+PA
Sbjct: 191 GVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPA 250
Query: 181 IIFIDELDAIAPKR 222
IIFIDE+DAIA R
Sbjct: 251 IIFIDEVDAIATAR 264
Score = 71.7 bits (168), Expect = 3e-13
Identities = 36/105 (34%), Positives = 61/105 (58%), Gaps = 1/105 (0%)
Frame = +3
Query: 261 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 440
+LL MDG ++ +V V+ ATNR +++DPAL R GR DR+I+ +PD + + ++ T
Sbjct: 281 ELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTS 340
Query: 441 NMKLGDDVDLEQIAAESHGHVGAISRXLCSEAALQQILR-RWILI 572
M L D+VDLE + A +C EA + + + R++++
Sbjct: 341 KMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVIL 385
>At1g05910.1 68414.m00620 cell division cycle protein 48-related /
CDC48-related similar to SP|P54609 Cell division cycle
protein 48 homolog {Arabidopsis thaliana}; contains Pfam
profiles PF00004: ATPase AAA family, PF00439:
Bromodomain
Length = 1210
Score = 87.4 bits (207), Expect = 6e-18
Identities = 46/104 (44%), Positives = 65/104 (62%), Gaps = 1/104 (0%)
Frame = +3
Query: 255 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 434
VS LL LMDG+ V+++ ATNR ++ID ALRR GRFDRE + +P R EIL IH
Sbjct: 507 VSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFSLPGCEARAEILDIH 566
Query: 435 TKNMKLGDDVDL-EQIAAESHGHVGAISRXLCSEAALQQILRRW 563
T+ K +L E++AA G+ GA + LC+EAA++ ++
Sbjct: 567 TRKWKHPPTRELKEELAATCVGYCGADLKALCTEAAIRAFREKY 610
Score = 83.4 bits (197), Expect = 1e-16
Identities = 40/86 (46%), Positives = 58/86 (67%), Gaps = 5/86 (5%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVA---NETG--AFFFLINGPEIMSKLAGESESNLRKAFEEAD 165
G+L+ GPPGTGKTLIARA+A ++ G F++ G +++SK GE+E L+ FEEA
Sbjct: 417 GVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQ 476
Query: 166 KNSPAIIFIDELDAIAPKREKTHGEV 243
+N P+IIF DE+D +AP R ++
Sbjct: 477 RNQPSIIFFDEIDGLAPVRSSKQEQI 502
>At4g23940.1 68417.m03443 FtsH protease, putative contains
similarity to zinc dependent protease GI:7650138 from
[Arabidopsis thaliana]
Length = 946
Score = 86.6 bits (205), Expect = 1e-17
Identities = 46/99 (46%), Positives = 61/99 (61%)
Frame = +3
Query: 246 KTYVSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEIL 425
+T ++QLL +DG VI + ATNR + +DPAL R GRFDR+I + P+A GRL+IL
Sbjct: 558 ETTLNQLLIELDGFDTGKGVIFLGATNRRDLLDPALLRPGRFDRKIRVRPPNAKGRLDIL 617
Query: 426 RIHTKNMKLGDDVDLEQIAAESHGHVGAISRXLCSEAAL 542
+IH +K+ D VDL A+ G GA L EAAL
Sbjct: 618 KIHASKVKMSDSVDLSSYASNLPGWSGAKLAQLVQEAAL 656
Score = 81.4 bits (192), Expect = 4e-16
Identities = 35/88 (39%), Positives = 57/88 (64%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G+L+ GPPG GKTL+A+A+A E G F+ + G E + L G + +R F+ A N P+
Sbjct: 465 GVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPS 524
Query: 181 IIFIDELDAIAPKREKTHGEVERRMFHS 264
+IFIDE+DA+A +R+ E +++++
Sbjct: 525 VIFIDEIDALATRRQGIFKENSDQLYNA 552
>At2g20140.1 68415.m02353 26S protease regulatory complex subunit 4,
putative similar to Swiss-Prot:P48601 26S protease
regulatory subunit 4 (P26S4) [Drosophila melanogaster]
Length = 443
Score = 86.2 bits (204), Expect = 1e-17
Identities = 39/85 (45%), Positives = 56/85 (65%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G+++YG PGTGKTL+A+AVAN T A F + G E++ K G+ +R+ F AD SP+
Sbjct: 224 GVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPS 283
Query: 181 IIFIDELDAIAPKREKTHGEVERRM 255
I+FIDE+DA+ KR + ER +
Sbjct: 284 IVFIDEIDAVGTKRYDANSGGEREI 308
Score = 79.4 bits (187), Expect = 2e-15
Identities = 41/100 (41%), Positives = 56/100 (56%)
Frame = +3
Query: 261 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 440
+LL +DG V V+ ATNR S+DPAL R GR DR+I+ +PD R I +IHT
Sbjct: 314 ELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTS 373
Query: 441 NMKLGDDVDLEQIAAESHGHVGAISRXLCSEAALQQILRR 560
M L +DV+LE+ GA + +C+EA L + R
Sbjct: 374 KMTLAEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRER 413
>At4g28000.1 68417.m04016 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 726
Score = 85.0 bits (201), Expect = 3e-17
Identities = 42/82 (51%), Positives = 57/82 (69%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
GIL++GPPGTGKT++A+A+ANE GA F ++ I SK GE E N+R F A K SP
Sbjct: 450 GILLFGPPGTGKTMMAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPT 509
Query: 181 IIFIDELDAIAPKREKTHGEVE 246
IIF+DE+D++ +R + GE E
Sbjct: 510 IIFVDEVDSMLGQRTRV-GEHE 530
Score = 57.2 bits (132), Expect = 7e-09
Identities = 31/100 (31%), Positives = 59/100 (59%), Gaps = 2/100 (2%)
Frame = +3
Query: 258 SQLLTLMDGMKKSS--HVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRI 431
++ +T DG+ ++ ++V+AATNRP +D A+ R RF+R I +G+P R +ILR
Sbjct: 537 NEFMTHWDGLMSNAGDRILVLAATNRPFDLDEAIIR--RFERRIMVGLPSVESREKILRT 594
Query: 432 HTKNMKLGDDVDLEQIAAESHGHVGAISRXLCSEAALQQI 551
K +++D +++A + G+ G+ + C+ AA + +
Sbjct: 595 LLSKEKT-ENLDFQELAQMTDGYSGSDLKNFCTTAAYRPV 633
>At3g05530.1 68416.m00606 26S proteasome AAA-ATPase subunit (RPT5a)
identical to GB:AAF22525 GI:6652886 from [Arabidopsis
thaliana]
Length = 424
Score = 85.0 bits (201), Expect = 3e-17
Identities = 38/74 (51%), Positives = 52/74 (70%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G+L+YGPPGTGKTL+ARA A +T A F + GP+++ G+ +R AF+ A + +P
Sbjct: 207 GVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPC 266
Query: 181 IIFIDELDAIAPKR 222
IIFIDE+DAI KR
Sbjct: 267 IIFIDEIDAIGTKR 280
Score = 75.8 bits (178), Expect = 2e-14
Identities = 37/99 (37%), Positives = 57/99 (57%)
Frame = +3
Query: 261 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 440
+LL +DG + V+AATNR + +DPAL R GR DR+I+ P R IL+IH++
Sbjct: 297 ELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSR 356
Query: 441 NMKLGDDVDLEQIAAESHGHVGAISRXLCSEAALQQILR 557
M + DV+ E++A + GA + +C EA + + R
Sbjct: 357 KMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 395
>At3g15120.1 68416.m01913 AAA-type ATPase family protein contains
PROSITE domains, PS00674: AAA-protein family signature
and PS00017: ATP/GTP-binding site motif A (P-loop)
Length = 1954
Score = 84.2 bits (199), Expect = 6e-17
Identities = 47/106 (44%), Positives = 65/106 (61%), Gaps = 1/106 (0%)
Frame = +3
Query: 255 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 434
VS LL L+DG+K V+V+ ATN P++IDPALRR GRFDREI +P R I+ +H
Sbjct: 845 VSTLLALLDGLKSRGSVVVIGATNYPDAIDPALRRPGRFDREIYFPLPSVDDRAAIISLH 904
Query: 435 TKNM-KLGDDVDLEQIAAESHGHVGAISRXLCSEAALQQILRRWIL 569
T+ K L+ IA E+ G GA + LC++AA+ + R + L
Sbjct: 905 TRKWPKPVSGYLLKWIAKETAGFAGADIQALCTQAAMIALNRSFPL 950
Score = 70.9 bits (166), Expect = 6e-13
Identities = 37/90 (41%), Positives = 53/90 (58%), Gaps = 9/90 (10%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGA-----FFFLINGPEIMSKLAGESESNLRKAFEEAD 165
GIL++G PGTGKTL+ RA+ +F G + + K G++E LR F+ A+
Sbjct: 755 GILLHGHPGTGKTLVVRALIGSLARGNRRIAYFARKGADCLGKYVGDAERQLRLLFQVAE 814
Query: 166 KNSPAIIFIDELDAIAPKR----EKTHGEV 243
K P+IIF DE+D +APKR ++TH V
Sbjct: 815 KCQPSIIFFDEIDGLAPKRSRQQDQTHSSV 844
>At1g09100.1 68414.m01016 26S protease regulatory subunit 6A,
putative identical to SP:O04019 from [Arabidopsis
thaliana]
Length = 423
Score = 84.2 bits (199), Expect = 6e-17
Identities = 39/74 (52%), Positives = 51/74 (68%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G+L+YGPPGTGKTL+ARA A +T A F + GP+++ G+ +R AF A + SP
Sbjct: 206 GVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPC 265
Query: 181 IIFIDELDAIAPKR 222
IIFIDE+DAI KR
Sbjct: 266 IIFIDEIDAIGTKR 279
Score = 74.9 bits (176), Expect = 3e-14
Identities = 37/99 (37%), Positives = 57/99 (57%)
Frame = +3
Query: 261 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 440
+LL +DG + V+AATNR + +DPAL R GR DR+I+ P R IL+IH++
Sbjct: 296 ELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARGRILQIHSR 355
Query: 441 NMKLGDDVDLEQIAAESHGHVGAISRXLCSEAALQQILR 557
M + DV+ E++A + GA + +C EA + + R
Sbjct: 356 KMNVNADVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 394
>At1g64110.2 68414.m07264 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 829
Score = 83.8 bits (198), Expect = 7e-17
Identities = 41/82 (50%), Positives = 56/82 (68%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
GIL++GPPGTGKT++A+A+A E GA F ++ I SK GE E N+R F A K SP
Sbjct: 557 GILLFGPPGTGKTMLAKAIAKEAGASFINVSMSTITSKWFGEDEKNVRALFTLASKVSPT 616
Query: 181 IIFIDELDAIAPKREKTHGEVE 246
IIF+DE+D++ +R + GE E
Sbjct: 617 IIFVDEVDSMLGQRTRV-GEHE 637
Score = 62.5 bits (145), Expect = 2e-10
Identities = 32/100 (32%), Positives = 60/100 (60%), Gaps = 2/100 (2%)
Frame = +3
Query: 258 SQLLTLMDGM--KKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRI 431
++ ++ DG+ K ++V+AATNRP +D A+ R RF+R I +G+P R +ILR
Sbjct: 644 NEFMSHWDGLMTKPGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPAVENREKILRT 701
Query: 432 HTKNMKLGDDVDLEQIAAESHGHVGAISRXLCSEAALQQI 551
K+ +++D +++A + G+ G+ + LC+ AA + +
Sbjct: 702 LLAKEKVDENLDYKELAMMTEGYTGSDLKNLCTTAAYRPV 741
>At1g64110.1 68414.m07263 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 824
Score = 83.8 bits (198), Expect = 7e-17
Identities = 41/82 (50%), Positives = 56/82 (68%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
GIL++GPPGTGKT++A+A+A E GA F ++ I SK GE E N+R F A K SP
Sbjct: 552 GILLFGPPGTGKTMLAKAIAKEAGASFINVSMSTITSKWFGEDEKNVRALFTLASKVSPT 611
Query: 181 IIFIDELDAIAPKREKTHGEVE 246
IIF+DE+D++ +R + GE E
Sbjct: 612 IIFVDEVDSMLGQRTRV-GEHE 632
Score = 62.5 bits (145), Expect = 2e-10
Identities = 32/100 (32%), Positives = 60/100 (60%), Gaps = 2/100 (2%)
Frame = +3
Query: 258 SQLLTLMDGM--KKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRI 431
++ ++ DG+ K ++V+AATNRP +D A+ R RF+R I +G+P R +ILR
Sbjct: 639 NEFMSHWDGLMTKPGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPAVENREKILRT 696
Query: 432 HTKNMKLGDDVDLEQIAAESHGHVGAISRXLCSEAALQQI 551
K+ +++D +++A + G+ G+ + LC+ AA + +
Sbjct: 697 LLAKEKVDENLDYKELAMMTEGYTGSDLKNLCTTAAYRPV 736
>At5g53170.1 68418.m06610 FtsH protease, putative similar to
ATP-dependent metalloprotease FtsH1 GI:3600100 from [Mus
musculus]
Length = 806
Score = 83.4 bits (197), Expect = 1e-16
Identities = 44/100 (44%), Positives = 63/100 (63%)
Frame = +3
Query: 246 KTYVSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEIL 425
K + QLL MDG +++ +IVMAATN P+ +DPAL R GRFDR I + PD GR EIL
Sbjct: 478 KKTLHQLLVEMDGFEQNEGIIVMAATNLPDILDPALTRPGRFDRHIVVPSPDVRGREEIL 537
Query: 426 RIHTKNMKLGDDVDLEQIAAESHGHVGAISRXLCSEAALQ 545
++ + + +DVD++ IA + G GA L + AA++
Sbjct: 538 ELYLQGKPMSEDVDVKAIARGTPGFNGADLANLVNIAAIK 577
Score = 77.8 bits (183), Expect = 5e-15
Identities = 36/85 (42%), Positives = 50/85 (58%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
GIL+ G PGTGKTL+A+A+A E G FF G E G +R F+ A K +P
Sbjct: 397 GILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPC 456
Query: 181 IIFIDELDAIAPKREKTHGEVERRM 255
IIFIDE+DA+ R++ G ++ +
Sbjct: 457 IIFIDEIDAVGSTRKQWEGHTKKTL 481
>At2g45500.1 68415.m05659 AAA-type ATPase family protein similar to
SP|Q9QYY8 Spastin (Fragment) {Mus musculus}; contains
Pfam profiles PF00004: ATPase AAA family, PF04212: MIT
domain
Length = 487
Score = 82.6 bits (195), Expect = 2e-16
Identities = 35/85 (41%), Positives = 57/85 (67%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G+L++GPPG GKT++A+AVA+E+ A FF ++ + SK GE+E ++ F+ A P+
Sbjct: 251 GLLLFGPPGNGKTMLAKAVASESQATFFNVSASSLTSKWVGEAEKLVKTLFQVAISRQPS 310
Query: 181 IIFIDELDAIAPKREKTHGEVERRM 255
+IF+DE+D+I R + E RR+
Sbjct: 311 VIFMDEIDSIMSTRSTSENEASRRL 335
Score = 49.2 bits (112), Expect = 2e-06
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
Frame = +3
Query: 258 SQLLTLMDGMKKSSH--VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRI 431
S+ L DG+ + VI++ ATN+P +D A+ R R + I + +PD+ R + +
Sbjct: 337 SEFLIQFDGVTSNPDDLVIIIGATNKPQELDDAVLR--RLVKRIYVPLPDSNVRKLLFKT 394
Query: 432 HTKNMKLG-DDVDLEQIAAESHGHVGAISRXLCSEAALQQI 551
K D D+++I E+ G+ G+ + LC EAA+ I
Sbjct: 395 KLKCQPHSLSDGDIDKIVKETEGYSGSDLQALCEEAAMMPI 435
>At5g20000.1 68418.m02380 26S proteasome AAA-ATPase subunit,
putative almost identical to 26S proteasome AAA-ATPase
subunit RPT6a GI:6652888 from [Arabidopsis thaliana];
almost identical to a member of conserved Sug1 CAD
family AtSUG1 GI:13537115 from [Arabidopsis thaliana]
Length = 419
Score = 82.2 bits (194), Expect = 2e-16
Identities = 36/74 (48%), Positives = 53/74 (71%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G+L+YGPPGTGKTL+ARAVA+ T F ++G E++ K GE +R+ F A +++P+
Sbjct: 197 GVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS 256
Query: 181 IIFIDELDAIAPKR 222
IIF+DE+D+I R
Sbjct: 257 IIFMDEIDSIGSAR 270
Score = 76.6 bits (180), Expect = 1e-14
Identities = 38/100 (38%), Positives = 63/100 (63%)
Frame = +3
Query: 261 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 440
+LL +DG + S+ + V+ ATNR + +D AL R GR DR+I+ P+ R +IL+IH++
Sbjct: 288 ELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSR 347
Query: 441 NMKLGDDVDLEQIAAESHGHVGAISRXLCSEAALQQILRR 560
M L +DL++IA + +G GA + +C+EA + + R
Sbjct: 348 KMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRER 387
>At5g19990.1 68418.m02379 26S proteasome AAA-ATPase subunit (RPT6a)
Length = 419
Score = 82.2 bits (194), Expect = 2e-16
Identities = 36/74 (48%), Positives = 53/74 (71%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G+L+YGPPGTGKTL+ARAVA+ T F ++G E++ K GE +R+ F A +++P+
Sbjct: 197 GVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS 256
Query: 181 IIFIDELDAIAPKR 222
IIF+DE+D+I R
Sbjct: 257 IIFMDEIDSIGSAR 270
Score = 76.6 bits (180), Expect = 1e-14
Identities = 38/100 (38%), Positives = 63/100 (63%)
Frame = +3
Query: 261 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 440
+LL +DG + S+ + V+ ATNR + +D AL R GR DR+I+ P+ R +IL+IH++
Sbjct: 288 ELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSR 347
Query: 441 NMKLGDDVDLEQIAAESHGHVGAISRXLCSEAALQQILRR 560
M L +DL++IA + +G GA + +C+EA + + R
Sbjct: 348 KMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRER 387
>At4g02480.1 68417.m00335 AAA-type ATPase family protein contains Pfam
domain, PF00004: ATPase, AAA family; similar to Spastin
(Swiss-Prot:Q9UBP0) [Homo sapiens] and Spastin (Fragment)
(Swiss-Prot:Q9QYY8) [Mus musculus]; similar to
mitochondrial sorting protein 1 (MSP1) protein
(TAT-binding homolog 4) (Swiss-Prot:P28737)
[Saccharomyces cerevisiae]
Length = 1265
Score = 81.8 bits (193), Expect = 3e-16
Identities = 40/90 (44%), Positives = 59/90 (65%), Gaps = 1/90 (1%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
GIL++GPPGTGKT++A+AVA E GA F I+ I SK GE E ++ F A K +P+
Sbjct: 1000 GILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPS 1059
Query: 181 IIFIDELDAIAPKREKT-HGEVERRMFHSY 267
+IF+DE+D++ +RE E R+M + +
Sbjct: 1060 VIFVDEVDSMLGRRENPGEHEAMRKMKNEF 1089
Score = 63.3 bits (147), Expect = 1e-10
Identities = 40/110 (36%), Positives = 61/110 (55%), Gaps = 4/110 (3%)
Frame = +3
Query: 222 RENP--R*SGKTYVSQLLTLMDGM--KKSSHVIVMAATNRPNSIDPALRRFGRFDREIDI 389
RENP + + ++ + DG+ K V+V+AATNRP +D A+ R R R + +
Sbjct: 1073 RENPGEHEAMRKMKNEFMVNWDGLRTKDRERVLVLAATNRPFDLDEAVIR--RLPRRLMV 1130
Query: 390 GIPDATGRLEILRIHTKNMKLGDDVDLEQIAAESHGHVGAISRXLCSEAA 539
+PDAT R +IL + ++ DVDLE IA + G+ G+ + LC AA
Sbjct: 1131 NLPDATNRSKILSVILAKEEIAPDVDLEAIANMTDGYSGSDLKNLCVTAA 1180
>At1g02890.1 68414.m00256 AAA-type ATPase family protein contains Pfam
domain, PF00004: ATPase, AAA family; similar to
mitochondrial sorting protein 1 (MSP1) (TAT-binding
homolog 4) (Swiss-Prot:P28737) [Saccharomyces cerevisiae]
Length = 1252
Score = 81.8 bits (193), Expect = 3e-16
Identities = 40/90 (44%), Positives = 59/90 (65%), Gaps = 1/90 (1%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
GIL++GPPGTGKT++A+AVA E GA F I+ I SK GE E ++ F A K +P+
Sbjct: 987 GILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPS 1046
Query: 181 IIFIDELDAIAPKREKT-HGEVERRMFHSY 267
+IF+DE+D++ +RE E R+M + +
Sbjct: 1047 VIFVDEVDSMLGRRENPGEHEAMRKMKNEF 1076
Score = 61.3 bits (142), Expect = 4e-10
Identities = 38/110 (34%), Positives = 61/110 (55%), Gaps = 4/110 (3%)
Frame = +3
Query: 222 RENP--R*SGKTYVSQLLTLMDGM--KKSSHVIVMAATNRPNSIDPALRRFGRFDREIDI 389
RENP + + ++ + DG+ K V+V+AATNRP +D A+ R R R + +
Sbjct: 1060 RENPGEHEAMRKMKNEFMINWDGLRTKDKERVLVLAATNRPFDLDEAVIR--RLPRRLMV 1117
Query: 390 GIPDATGRLEILRIHTKNMKLGDDVDLEQIAAESHGHVGAISRXLCSEAA 539
+PD+ R +IL + ++ +DVDLE IA + G+ G+ + LC AA
Sbjct: 1118 NLPDSANRSKILSVILAKEEMAEDVDLEAIANMTDGYSGSDLKNLCVTAA 1167
>At3g16290.1 68416.m02056 FtsH protease, putative contains
similarity to cell division protein FtsH GI:1652085 from
[Synechocystis sp. PCC 6803]
Length = 876
Score = 81.4 bits (192), Expect = 4e-16
Identities = 40/99 (40%), Positives = 62/99 (62%)
Frame = +3
Query: 255 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 434
++QLL +DG + VI +A+TNRP+ +DPAL R GRFDR+I I P GR+EIL++H
Sbjct: 533 LNQLLVSLDGFEGRGEVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILQVH 592
Query: 435 TKNMKLGDDVDLEQIAAESHGHVGAISRXLCSEAALQQI 551
+ + +D+D +A+ + G VGA + AA+ +
Sbjct: 593 ARKKPMAEDLDYMAVASMTDGMVGAELANIVEIAAINMM 631
Score = 79.8 bits (188), Expect = 1e-15
Identities = 35/74 (47%), Positives = 51/74 (68%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
GIL+ GPPG GKTL+A+AVA E G FF I+ + + G S +R ++EA +N+P+
Sbjct: 445 GILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRALYQEARENAPS 504
Query: 181 IIFIDELDAIAPKR 222
++FIDELDA+ +R
Sbjct: 505 VVFIDELDAVGRER 518
>At1g53750.1 68414.m06115 26S proteasome AAA-ATPase subunit (RPT1a)
similar to 26S proteasome ATPase subunit GI:1395190 from
[Spinacia oleracea]
Length = 426
Score = 81.4 bits (192), Expect = 4e-16
Identities = 37/100 (37%), Positives = 59/100 (59%)
Frame = +3
Query: 261 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 440
+++ +DG ++ V+ ATNRP+++DPAL R GR DR+++ G+PD R +I +IHT+
Sbjct: 294 EIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTR 353
Query: 441 NMKLGDDVDLEQIAAESHGHVGAISRXLCSEAALQQILRR 560
M D+ E +A GA R +C+EA + I R
Sbjct: 354 TMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRAR 393
Score = 79.4 bits (187), Expect = 2e-15
Identities = 37/74 (50%), Positives = 47/74 (63%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G+L YGPPGTGKTL+ARAVAN T A F + G E++ K GE +R+ F+ A
Sbjct: 204 GVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKAC 263
Query: 181 IIFIDELDAIAPKR 222
I+F DE+DAI R
Sbjct: 264 IVFFDEVDAIGGAR 277
>At1g50140.1 68414.m05623 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 640
Score = 81.0 bits (191), Expect = 5e-16
Identities = 41/94 (43%), Positives = 58/94 (61%), Gaps = 1/94 (1%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
GIL++GPPGTGKTL+A+A+A E GA F I G + SK G++E + F A K +P
Sbjct: 388 GILLFGPPGTGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFATKLAPV 447
Query: 181 IIFIDELDAIAPKR-EKTHGEVERRMFHSY*R*W 279
IIF+DE+D++ R + E RRM + + W
Sbjct: 448 IIFVDEIDSLLGARGGSSEHEATRRMRNEFMAAW 481
>At5g64580.1 68418.m08116 AAA-type ATPase family protein similar to
zinc dependent protease [Arabidopsis thaliana]
GI:7650138; contains Pfam profile PF00004: ATPase AAA
family
Length = 855
Score = 80.6 bits (190), Expect = 7e-16
Identities = 35/74 (47%), Positives = 50/74 (67%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G+L++GPPGTGKTL+A+A+A E G FF NG + + G + S ++ F + +P+
Sbjct: 351 GVLLHGPPGTGKTLLAKAIAGEAGLPFFAANGTDFVEMFVGVAASRVKDLFASSRSYAPS 410
Query: 181 IIFIDELDAIAPKR 222
IIFIDE+DAI KR
Sbjct: 411 IIFIDEIDAIGSKR 424
Score = 72.9 bits (171), Expect = 1e-13
Identities = 40/99 (40%), Positives = 63/99 (63%), Gaps = 5/99 (5%)
Frame = +3
Query: 261 QLLTLMDGMK-KSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHT 437
Q+LT MDG K +S V+V+ ATNR + +DPAL R GRFD+ I +G+P GRL IL++H
Sbjct: 442 QILTEMDGFKVTTSQVLVIGATNRLDILDPALLRKGRFDKIIRVGLPSKDGRLAILKVHA 501
Query: 438 KN--MKLGDDVD--LEQIAAESHGHVGAISRXLCSEAAL 542
+N + D+ + L+++A + GA + + +EA +
Sbjct: 502 RNKFFRSEDEKEELLQEVAENTEDFTGAELQNVLNEAGI 540
>At3g27120.1 68416.m03393 spastin ATPase, putative similar to
SWISS-PROT:Q9QYY8 spastin (Fragment) [Mus musculus];
contains Pfam domain, PF00004: ATPase, AAA family
Length = 287
Score = 80.6 bits (190), Expect = 7e-16
Identities = 38/82 (46%), Positives = 54/82 (65%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G+L++GPPGTGKT+I +A+A E A FF I+ + SK GE E +R F A PA
Sbjct: 45 GLLLFGPPGTGKTMIGKAIAGEAKATFFYISASSLTSKWIGEGEKLVRALFGVASCRQPA 104
Query: 181 IIFIDELDAIAPKREKTHGEVE 246
+IF+DE+D++ +R K+ GE E
Sbjct: 105 VIFVDEIDSLLSQR-KSDGEHE 125
Score = 41.5 bits (93), Expect = 4e-04
Identities = 34/116 (29%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Frame = +3
Query: 240 SGKTYVSQLLTLMDGMKKSSH-VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRL 416
S + +Q L M+G S ++++ ATNRP +D A RR R + + I +P + R
Sbjct: 126 SSRRLKTQFLIEMEGFDSGSEQILLIGATNRPQELDEAARR--RLTKRLYIPLPSSEARA 183
Query: 417 EILRIHTKN---MKLGDDVDLEQIAAESHGHVGAISRXLCSEAA---LQQILRRWI 566
I++ K L DD D+ I + G+ G+ + L +A L++ L+R I
Sbjct: 184 WIIQNLLKKDGLFTLSDD-DMNIICNLTEGYSGSDMKNLVKDATMGPLREALKRGI 238
>At2g34560.2 68415.m04246 katanin, putative similar to katanin p60
subunit [Strongylocentrotus purpuratus] GI:3098603;
contains Pfam profile PF00004: ATPase AAA family
Length = 393
Score = 80.6 bits (190), Expect = 7e-16
Identities = 39/88 (44%), Positives = 59/88 (67%), Gaps = 3/88 (3%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
GIL++GPPGTGKT++A+AVA E FF I+ ++SK G+SE +R F+ A ++P+
Sbjct: 147 GILLFGPPGTGKTMLAKAVATECNTTFFNISASSVVSKWRGDSEKLIRVLFDLARHHAPS 206
Query: 181 IIFIDELDAIAPKR---EKTHGEVERRM 255
IF+DE+DAI +R ++ E RR+
Sbjct: 207 TIFLDEIDAIISQRGGEGRSEHEASRRL 234
Score = 55.2 bits (127), Expect = 3e-08
Identities = 34/106 (32%), Positives = 61/106 (57%), Gaps = 1/106 (0%)
Frame = +3
Query: 258 SQLLTLMDGMKKSSHVI-VMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 434
++LL MDG++K++ ++ V+AATN P +D A+ R R ++ I + +PD R + +
Sbjct: 236 TELLIQMDGLQKTNELVFVLAATNLPWELDAAMLR--RLEKRILVPLPDPEARRGMFEML 293
Query: 435 TKNMKLGDDVDLEQIAAESHGHVGAISRXLCSEAALQQILRRWILI 572
+ + + + + +S G+ G+ R LC EAA+Q LRR + I
Sbjct: 294 IPSQPGDEPLPHDVLVEKSEGYSGSDIRILCKEAAMQP-LRRTLAI 338
>At2g34560.1 68415.m04245 katanin, putative similar to katanin p60
subunit [Strongylocentrotus purpuratus] GI:3098603;
contains Pfam profile PF00004: ATPase AAA family
Length = 384
Score = 80.6 bits (190), Expect = 7e-16
Identities = 39/88 (44%), Positives = 59/88 (67%), Gaps = 3/88 (3%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
GIL++GPPGTGKT++A+AVA E FF I+ ++SK G+SE +R F+ A ++P+
Sbjct: 138 GILLFGPPGTGKTMLAKAVATECNTTFFNISASSVVSKWRGDSEKLIRVLFDLARHHAPS 197
Query: 181 IIFIDELDAIAPKR---EKTHGEVERRM 255
IF+DE+DAI +R ++ E RR+
Sbjct: 198 TIFLDEIDAIISQRGGEGRSEHEASRRL 225
Score = 55.2 bits (127), Expect = 3e-08
Identities = 34/106 (32%), Positives = 61/106 (57%), Gaps = 1/106 (0%)
Frame = +3
Query: 258 SQLLTLMDGMKKSSHVI-VMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 434
++LL MDG++K++ ++ V+AATN P +D A+ R R ++ I + +PD R + +
Sbjct: 227 TELLIQMDGLQKTNELVFVLAATNLPWELDAAMLR--RLEKRILVPLPDPEARRGMFEML 284
Query: 435 TKNMKLGDDVDLEQIAAESHGHVGAISRXLCSEAALQQILRRWILI 572
+ + + + + +S G+ G+ R LC EAA+Q LRR + I
Sbjct: 285 IPSQPGDEPLPHDVLVEKSEGYSGSDIRILCKEAAMQP-LRRTLAI 329
>At1g53780.1 68414.m06120 26S proteasome AAA-ATPase subunit,
putative similar to 26S proteasome AAA-ATPase subunit
RPT1 SP:Q41365 from [Spinacia oleracea]
Length = 464
Score = 80.6 bits (190), Expect = 7e-16
Identities = 37/74 (50%), Positives = 48/74 (64%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G+L YGPPG+GKTL+ARAVAN TGA F + G E++ K GE +R+ F+ A
Sbjct: 241 GVLCYGPPGSGKTLVARAVANRTGACFIRVVGSELVQKYIGEGARMVRELFQMARSKKAC 300
Query: 181 IIFIDELDAIAPKR 222
I+F DE+DAI R
Sbjct: 301 ILFFDEIDAIGGAR 314
Score = 77.8 bits (183), Expect = 5e-15
Identities = 37/97 (38%), Positives = 56/97 (57%)
Frame = +3
Query: 261 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 440
++L +DG ++ V+ ATNRP+ +DPAL R GR DR+++ +PD GR +I +IHT+
Sbjct: 331 EILYQLDGFDARGNIKVLMATNRPDILDPALLRPGRLDRKVEFCLPDLEGRTQIFKIHTR 390
Query: 441 NMKLGDDVDLEQIAAESHGHVGAISRXLCSEAALQQI 551
M D+ E +A GA R +C EA + I
Sbjct: 391 TMSCERDIRFELLAGLCPNSTGADIRSVCIEAGMYAI 427
>At4g24860.1 68417.m03559 AAA-type ATPase family protein contains Pfam
profile PF00004: ATPase, AAA family
Length = 1122
Score = 80.2 bits (189), Expect = 9e-16
Identities = 40/94 (42%), Positives = 59/94 (62%), Gaps = 1/94 (1%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
GIL++GPPGTGKT++A+AVA E A F I+ I SK GE E ++ F A K SP+
Sbjct: 857 GILLFGPPGTGKTMLAKAVAKEADANFINISMSSITSKWFGEGEKYVKAVFSLASKMSPS 916
Query: 181 IIFIDELDAIAPKRE-KTHGEVERRMFHSY*R*W 279
+IF+DE+D++ +RE E R++ + + W
Sbjct: 917 VIFVDEVDSMLGRREHPREHEASRKIKNEFMMHW 950
Score = 61.3 bits (142), Expect = 4e-10
Identities = 37/114 (32%), Positives = 66/114 (57%), Gaps = 4/114 (3%)
Frame = +3
Query: 222 RENPR*--SGKTYVSQLLTLMDGM--KKSSHVIVMAATNRPNSIDPALRRFGRFDREIDI 389
RE+PR + + ++ + DG+ ++ V+V+AATNRP +D A+ R R R + +
Sbjct: 930 REHPREHEASRKIKNEFMMHWDGLTTQERERVLVLAATNRPFDLDEAVIR--RLPRRLMV 987
Query: 390 GIPDATGRLEILRIHTKNMKLGDDVDLEQIAAESHGHVGAISRXLCSEAALQQI 551
G+PD + R IL++ L D+D+ +IA+ ++G+ G+ + LC AA + I
Sbjct: 988 GLPDTSNRAFILKVILAKEDLSPDLDIGEIASMTNGYSGSDLKNLCVTAAHRPI 1041
>At2g27600.1 68415.m03346 AAA-type ATPase family protein / vacuolar
sorting protein-related similar to SP|P46467 SKD1
protein (Vacuolar sorting protein 4b) {Mus musculus};
contains Pfam profiles PF00004: ATPase AAA family,
PF04212: MIT domain
Length = 435
Score = 80.2 bits (189), Expect = 9e-16
Identities = 37/84 (44%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Frame = +1
Query: 7 LMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAII 186
L+YGPPGTGK+ +A+AVA E + FF ++ +++SK GESE + FE A +++P+II
Sbjct: 169 LLYGPPGTGKSYLAKAVATEADSTFFSVSSSDLVSKWMGESEKLVSNLFEMARESAPSII 228
Query: 187 FIDELDAIAPKR-EKTHGEVERRM 255
F+DE+D++ R E E RR+
Sbjct: 229 FVDEIDSLCGTRGEGNESEASRRI 252
Score = 49.6 bits (113), Expect = 1e-06
Identities = 30/101 (29%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Frame = +3
Query: 213 TKERENPR*SGKTYVSQLLTLMDGMKKSSH-VIVMAATNRPNSIDPALRRFGRFDREIDI 389
T+ N + + ++LL M G+ + V+V+AATN P ++D A+RR RFD+ I I
Sbjct: 239 TRGEGNESEASRRIKTELLVQMQGVGHNDEKVLVLAATNTPYALDQAIRR--RFDKRIYI 296
Query: 390 GIPDATGRLEILRIHTKNMKLG-DDVDLEQIAAESHGHVGA 509
+P+A R + ++H + + D E + ++ G G+
Sbjct: 297 PLPEAKARQHMFKVHLGDTPHNLTEPDFEYLGQKTEGFSGS 337
>At4g27680.1 68417.m03980 MSP1 protein, putative /
intramitochondrial sorting protein, putative similar to
Swiss-Prot:P28737 MSP1 protein (TAT-binding homolog 4)
[Saccharomyces cerevisiae]; contains Pfam domain,
PF00004: ATPase, AAA family
Length = 398
Score = 79.8 bits (188), Expect = 1e-15
Identities = 37/85 (43%), Positives = 54/85 (63%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G+L+YGPPGTGKT++A+A+A E+GA F + +MSK G+++ + F A K PA
Sbjct: 121 GVLLYGPPGTGKTMLAKAIAKESGAVFINVRVSNLMSKWFGDAQKLVSAVFSLAYKLQPA 180
Query: 181 IIFIDELDAIAPKREKTHGEVERRM 255
IIFIDE+++ +R T E M
Sbjct: 181 IIFIDEVESFLGQRRSTDHEAMANM 205
Score = 67.7 bits (158), Expect = 5e-12
Identities = 36/96 (37%), Positives = 55/96 (57%), Gaps = 2/96 (2%)
Frame = +3
Query: 258 SQLLTLMDGMKKSSH--VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRI 431
++ + L DG H V+V+AATNRP+ +D A+ R R + +IGIPD R EIL++
Sbjct: 207 TEFMALWDGFSTDPHARVMVLAATNRPSELDEAILR--RLPQAFEIGIPDRRERAEILKV 264
Query: 432 HTKNMKLGDDVDLEQIAAESHGHVGAISRXLCSEAA 539
K ++ D+D + IA G+ G+ LC +AA
Sbjct: 265 TLKGERVEPDIDFDHIARLCEGYTGSDIFELCKKAA 300
>At4g04910.1 68417.m00714 AAA-type ATPase family protein similar to
SP|P18708 Vesicular-fusion protein NSF
(N-ethylmaleimide-sensitive fusion protein)
(NEM-sensitive fusion protein) {Cricetulus griseus};
contains Pfam profiles PF00004: ATPase AAA family,
PF02359: Cell division protein 48 (CDC48) N-terminal
domain; contains non-consensus AT-AC splice sites at
intron 2
Length = 742
Score = 79.8 bits (188), Expect = 1e-15
Identities = 38/89 (42%), Positives = 63/89 (70%), Gaps = 4/89 (4%)
Frame = +3
Query: 255 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 434
V+QLLT +DG++ ++V+++ TNR + +D AL R GR + +++I +PD GRL+IL+IH
Sbjct: 348 VNQLLTKIDGVEALNNVLLIGMTNRKDLLDEALLRPGRLEVQVEISLPDEAGRLQILQIH 407
Query: 435 TKNMK----LGDDVDLEQIAAESHGHVGA 509
T MK LG D++L+++AA + + GA
Sbjct: 408 TNKMKENSFLGTDINLQELAARTKNYSGA 436
Score = 68.5 bits (160), Expect = 3e-12
Identities = 35/86 (40%), Positives = 52/86 (60%), Gaps = 9/86 (10%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANE-TGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSP 177
G+L++GPPGTGKTL+AR + G ++NGPE++SK GE+E N+R F +A+++
Sbjct: 252 GMLLFGPPGTGKTLMARQIGKMLNGKDPKIVNGPEVLSKFVGETEKNVRDLFADAEQDQR 311
Query: 178 A--------IIFIDELDAIAPKREKT 231
+I DE+DAI R T
Sbjct: 312 TLGDASELHVIIFDEIDAICKSRGST 337
Score = 38.3 bits (85), Expect = 0.004
Identities = 20/69 (28%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = +1
Query: 7 LMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESE-SNLRKAFEEADKNSPAI 183
L+ GP G+GKT +A + ++ + I E M L+ ++ +++ K FE+A K+ +I
Sbjct: 534 LLEGPSGSGKTALAATIGIDSDFPYVKIVSAETMIGLSESTKCAHIVKVFEDAYKSPMSI 593
Query: 184 IFIDELDAI 210
I +D+++ +
Sbjct: 594 IILDDIERL 602
>At3g19740.1 68416.m02499 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 439
Score = 79.8 bits (188), Expect = 1e-15
Identities = 41/94 (43%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
GIL++GPPGTGKTL+A+A+A E GA F I G + SK G++E + F A K +P
Sbjct: 187 GILLFGPPGTGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFASKLAPV 246
Query: 181 IIFIDELDAIAPKREKT-HGEVERRMFHSY*R*W 279
IIF+DE+D++ R E RRM + + W
Sbjct: 247 IIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAW 280
>At1g80350.1 68414.m09406 katanin 1 (KTN1) identical to katanin 1
(KTN1) [Arabidopsis thaliana] GI:14133602
Length = 523
Score = 79.8 bits (188), Expect = 1e-15
Identities = 37/74 (50%), Positives = 51/74 (68%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G+LM+GPPGTGKTL+A+AVA E G FF ++ + SK GESE +R F+ A +P+
Sbjct: 274 GVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPS 333
Query: 181 IIFIDELDAIAPKR 222
IFIDE+D++ R
Sbjct: 334 TIFIDEIDSLCNSR 347
Score = 61.3 bits (142), Expect = 4e-10
Identities = 35/102 (34%), Positives = 59/102 (57%)
Frame = +3
Query: 255 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 434
VS T DG +K V+V+AATN P ID ALRR R ++ I I +PD R ++ I+
Sbjct: 370 VSNTATNEDGSRKI--VMVLAATNFPWDIDEALRR--RLEKRIYIPLPDFESRKALININ 425
Query: 435 TKNMKLGDDVDLEQIAAESHGHVGAISRXLCSEAALQQILRR 560
+ +++ DV++E +A + G+ G +C +A++ + R+
Sbjct: 426 LRTVEVASDVNIEDVARRTEGYSGDDLTNVCRDASMNGMRRK 467
>At2g29080.1 68415.m03535 FtsH protease, putative similar to
AAA-metalloprotease FtsH [Pisum sativum] GI:15021761;
contains Pfam profiles PF01434: Peptidase family M41,
PF00004: ATPase AAA family
Length = 809
Score = 79.4 bits (187), Expect = 2e-15
Identities = 43/98 (43%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Frame = +3
Query: 255 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 434
++QLL MDG ++ V+V+A TNRP+ +D AL R GRFDR+I I PD GR +I +I+
Sbjct: 445 LNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFKIY 504
Query: 435 TKNMKLGDDVDL--EQIAAESHGHVGAISRXLCSEAAL 542
K +KL + +++AA + G GA +C+EAAL
Sbjct: 505 LKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAAL 542
Score = 79.0 bits (186), Expect = 2e-15
Identities = 37/74 (50%), Positives = 49/74 (66%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G L+ GPPGTGKTL+A+A A E+G F I+G + M G S +R F+EA + +P+
Sbjct: 357 GALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRHLFQEARQAAPS 416
Query: 181 IIFIDELDAIAPKR 222
IIFIDE+DAI R
Sbjct: 417 IIFIDEIDAIGRAR 430
>At5g53540.1 68418.m06653 MSP1 protein, putative /
intramitochondrial sorting protein, putative similar to
Swiss-Prot:P28737 MSP1 protein (TAT-binding homolog 4)
[Saccharomyces cerevisiae]; contains Pfam domain,
PF00004: ATPase, AAA family
Length = 403
Score = 79.0 bits (186), Expect = 2e-15
Identities = 37/85 (43%), Positives = 53/85 (62%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G+L+YGPPGTGKT++A+A+A E+ A F + +MSK G+++ + F A K PA
Sbjct: 124 GVLLYGPPGTGKTMLAKAIARESEAVFINVKVSNLMSKWFGDAQKLVSAVFSLAYKLQPA 183
Query: 181 IIFIDELDAIAPKREKTHGEVERRM 255
IIFIDE+D+ +R T E M
Sbjct: 184 IIFIDEVDSFLGQRRSTDNEAMSNM 208
Score = 61.3 bits (142), Expect = 4e-10
Identities = 32/96 (33%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Frame = +3
Query: 258 SQLLTLMDGMK--KSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRI 431
++ + L DG +++ V+V+AATNRP+ +D A+ R RF + +IG+PD R +IL++
Sbjct: 210 TEFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RFPQSFEIGMPDCQERAQILKV 267
Query: 432 HTKNMKLGDDVDLEQIAAESHGHVGAISRXLCSEAA 539
K + D++ ++IA + G+ LC +AA
Sbjct: 268 VLKGESVESDINYDRIARLCEDYTGSDIFELCKKAA 303
>At5g08470.1 68418.m00999 peroxisome biogenesis protein (PEX1)
identical to peroxisome biogenesis protein PEX1
[Arabidopsis thaliana] gi|12006272|gb|AAG44817; contains
Pfam profile PF00004: ATPase, AAA family; identical to
cDNA peroxisome biogenesis protein PEX1 (PEX1) mRNA,
partial cds GI:12006271
Length = 1130
Score = 79.0 bits (186), Expect = 2e-15
Identities = 42/99 (42%), Positives = 61/99 (61%)
Frame = +3
Query: 255 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 434
V+Q LT +DG++ + V V AAT+RP+ +DPAL R GR DR + P RLEIL +
Sbjct: 965 VNQFLTELDGVEVLTGVFVFAATSRPDLLDPALLRPGRLDRLLLCDFPSPPERLEILTVL 1024
Query: 435 TKNMKLGDDVDLEQIAAESHGHVGAISRXLCSEAALQQI 551
++ + + DD+DLE IA + G GA + L S+A L +
Sbjct: 1025 SRKLLMADDIDLEPIALMTEGFSGADLQALLSDAQLAAV 1063
Score = 75.4 bits (177), Expect = 3e-14
Identities = 36/88 (40%), Positives = 51/88 (57%)
Frame = +1
Query: 4 ILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAI 183
+L+YGPPG GKT I A A F + GPE+++K G SE +R F +A +P I
Sbjct: 881 VLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCI 940
Query: 184 IFIDELDAIAPKREKTHGEVERRMFHSY 267
+F DE D+IAPKR + V R+ + +
Sbjct: 941 LFFDEFDSIAPKRGHDNTGVTDRVVNQF 968
Score = 46.0 bits (104), Expect = 2e-05
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Frame = +1
Query: 4 ILMYGPPGTGKTLIARAVA------NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAD 165
IL+YGPPG+GKT++ARA A + A L++ + + L E
Sbjct: 596 ILIYGPPGSGKTILARAAAKYFEEQKDLLAHVILVSCSTLALEKVQHIHHVLSSVIAEGL 655
Query: 166 KNSPAIIFIDELDAIAPKREKTHG 237
+++P++I +D+LD+I T G
Sbjct: 656 EHAPSVIILDDLDSIISSSSDTEG 679
>At1g07510.1 68414.m00804 FtsH protease, putative similar to
AAA-metalloprotease FtsH [Pisum sativum] GI:15021761;
contains Pfam profiles PF01434: Peptidase family M41,
PF00004: ATPase AAA family
Length = 813
Score = 79.0 bits (186), Expect = 2e-15
Identities = 43/98 (43%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Frame = +3
Query: 255 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 434
++QLL MDG ++ V+V+A TNRP+ +D AL R GRFDR+I I PD GR +I +I+
Sbjct: 451 LNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIY 510
Query: 435 TKNMKLGDDVDL--EQIAAESHGHVGAISRXLCSEAAL 542
K +KL + +++AA + G GA +C+EAAL
Sbjct: 511 LKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAAL 548
Score = 76.6 bits (180), Expect = 1e-14
Identities = 36/74 (48%), Positives = 48/74 (64%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G L+ GPPGTGKTL+A+A A E+ F I+G + M G S +R F+EA + +P+
Sbjct: 362 GALLVGPPGTGKTLLAKATAGESAVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPS 421
Query: 181 IIFIDELDAIAPKR 222
IIFIDE+DAI R
Sbjct: 422 IIFIDEIDAIGRAR 435
>At2g26140.1 68415.m03137 FtsH protease, putative contains
similarity to YME1 GI:295582, a member of the
ftsH-SEC18-PAS1-CDC48 family of putative ATPase-encoding
genes from [Saccharomyces cerevisiae]
Length = 717
Score = 78.6 bits (185), Expect = 3e-15
Identities = 44/100 (44%), Positives = 60/100 (60%)
Frame = +3
Query: 246 KTYVSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEIL 425
K ++Q+L +DG K++ +IV+AATN P S+D AL R GRFDR I + PD GR +IL
Sbjct: 344 KMTLNQMLVELDGFKQNEGIIVVAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIL 403
Query: 426 RIHTKNMKLGDDVDLEQIAAESHGHVGAISRXLCSEAALQ 545
H + +DVDL IA + G GA L + AAL+
Sbjct: 404 ESHMSKVLKAEDVDLMIIARGTPGFSGADLANLVNVAALK 443
Score = 78.2 bits (184), Expect = 4e-15
Identities = 37/74 (50%), Positives = 45/74 (60%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G+L+ GPPGTGKT++ARA+A E G FF +G E G +R F A K SP
Sbjct: 262 GVLLVGPPGTGKTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKCSPC 321
Query: 181 IIFIDELDAIAPKR 222
IIFIDE+DAI R
Sbjct: 322 IIFIDEIDAIGGSR 335
>At1g45000.1 68414.m05158 26S proteasome regulatory complex subunit
p42D, putative similar to 26S proteasome regulatory
complex subunit p42D [Drosophila melanogaster]
gi|6434958|gb|AAF08391
Length = 399
Score = 78.6 bits (185), Expect = 3e-15
Identities = 38/94 (40%), Positives = 57/94 (60%)
Frame = +3
Query: 261 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 440
+LL +DG + V ++ ATNRP+ +DPAL R GR DR+I+I +P+ R+EIL+IH
Sbjct: 265 ELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAS 324
Query: 441 NMKLGDDVDLEQIAAESHGHVGAISRXLCSEAAL 542
+ ++D E I G GA R +C+EA +
Sbjct: 325 GIAKHGEIDYEAIVKLGEGFNGADLRNICTEAGM 358
Score = 78.2 bits (184), Expect = 4e-15
Identities = 36/74 (48%), Positives = 50/74 (67%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G+L+YGPPGTGKTL+ARA+A+ A F + I+ K GES +R+ F A ++ P
Sbjct: 175 GVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPC 234
Query: 181 IIFIDELDAIAPKR 222
IIF+DE+DAI +R
Sbjct: 235 IIFMDEIDAIGGRR 248
>At5g43010.1 68418.m05245 26S proteasome AAA-ATPase subunit (RPT4a)
gb|AAF22524.1
Length = 399
Score = 78.2 bits (184), Expect = 4e-15
Identities = 36/74 (48%), Positives = 50/74 (67%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G+L+YGPPGTGKTL+ARA+A+ A F + I+ K GES +R+ F A ++ P
Sbjct: 175 GVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPC 234
Query: 181 IIFIDELDAIAPKR 222
IIF+DE+DAI +R
Sbjct: 235 IIFMDEIDAIGGRR 248
Score = 77.0 bits (181), Expect = 8e-15
Identities = 37/94 (39%), Positives = 57/94 (60%)
Frame = +3
Query: 261 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 440
+LL +DG V ++ ATNRP+ +DPAL R GR DR+I+I +P+ R++IL+IH
Sbjct: 265 ELLNQLDGFDNLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMDILKIHAA 324
Query: 441 NMKLGDDVDLEQIAAESHGHVGAISRXLCSEAAL 542
+ ++D E I + G GA R +C+EA +
Sbjct: 325 GIAKHGEIDYEAIVKLAEGFNGADLRNICTEAGM 358
>At1g79560.1 68414.m09275 FtsH protease, putative contains
similarity to chloroplast FtsH protease GI:5804782 from
[Nicotiana tabacum]
Length = 1008
Score = 68.5 bits (160), Expect = 3e-12
Identities = 34/94 (36%), Positives = 52/94 (55%)
Frame = +3
Query: 270 TLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMK 449
T +D VI + ATNRP+ +D R GR DR + IG+PDA R++I +H+
Sbjct: 625 TGIDRFSLRQAVIFICATNRPDELDLEFVRSGRIDRRLYIGLPDAKQRVQIFGVHSAGKN 684
Query: 450 LGDDVDLEQIAAESHGHVGAISRXLCSEAALQQI 551
L +D+D ++ + G GA R L +EAA+ +
Sbjct: 685 LAEDIDFGKLVFRTVGFSGADIRNLVNEAAIMSV 718
Score = 68.1 bits (159), Expect = 4e-12
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIM-SKLAGESESNLRKAFEEADKNSP 177
G+L+ GPPGTGKTL AR +A E+G F +G E S+ +G ++ N + F A +N+P
Sbjct: 528 GVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDSEKSGAAKIN--EMFSIARRNAP 585
Query: 178 AIIFIDELDAIAPKREK 228
A +F+DE+DAIA + +
Sbjct: 586 AFVFVDEIDAIAGRHAR 602
>At4g04180.1 68417.m00593 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 609
Score = 68.1 bits (159), Expect = 4e-12
Identities = 37/85 (43%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Frame = +1
Query: 4 ILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADK-NSPA 180
+L GPPGTGKT AR +AN+ G + +MSK GESE L F +A++ A
Sbjct: 364 VLFEGPPGTGKTSCARVIANQAGIPLLYVPLEAVMSKYYGESERLLGAVFSQANELPDGA 423
Query: 181 IIFIDELDAIAPKREKTHGEVERRM 255
IIF+DE+DA A R+ E RR+
Sbjct: 424 IIFLDEIDAFAISRDSEMHEATRRV 448
Score = 52.0 bits (119), Expect = 3e-07
Identities = 33/94 (35%), Positives = 48/94 (51%)
Frame = +3
Query: 255 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 434
+S LL +DG ++ V+V+AATNR +DPAL RFD I +PD R EI+ +
Sbjct: 449 LSVLLRQIDGFEQEKKVVVIAATNRKQDLDPAL--ISRFDSMIMFDLPDLQTRQEIIAQY 506
Query: 435 TKNMKLGDDVDLEQIAAESHGHVGAISRXLCSEA 536
K + +L Q+A + G R +C A
Sbjct: 507 AKQL---SKPELVQLAQATEAMSGRDIRDVCQGA 537
>At1g62130.1 68414.m07010 AAA-type ATPase family protein contains Pfam
domain, PF00004: ATPase, AAA family
Length = 1025
Score = 64.5 bits (150), Expect = 5e-11
Identities = 38/81 (46%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
GIL++GP GTGKT++A+AVA E GA LIN MS+ E E ++ F A K SP+
Sbjct: 772 GILLFGPSGTGKTMLAKAVATEAGA--NLIN--MSMSRWFSEGEKYVKAVFSLASKISPS 827
Query: 181 IIFIDELDAIAPK-REKTHGE 240
IIF+DE++++ + R KT E
Sbjct: 828 IIFLDEVESMLHRYRLKTKNE 848
Score = 61.7 bits (143), Expect = 3e-10
Identities = 32/94 (34%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Frame = +3
Query: 279 DGMK--KSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKL 452
DG++ + V+V+AATNRP +D A+ R R + +G+PDA R +IL++ L
Sbjct: 854 DGLRTNEKERVLVLAATNRPFDLDEAVIR--RLPHRLMVGLPDARSRSKILKVILSKEDL 911
Query: 453 GDDVDLEQIAAESHGHVGAISRXLCSEAALQQIL 554
D D++++A+ ++G+ G + LC AA ++I+
Sbjct: 912 SPDFDIDEVASMTNGYSGNDLKNLCVTAARRRII 945
>At4g36580.1 68417.m05193 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 620
Score = 60.5 bits (140), Expect = 8e-10
Identities = 29/84 (34%), Positives = 53/84 (63%), Gaps = 2/84 (2%)
Frame = +1
Query: 4 ILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADK-NSPA 180
++ YGPPGTGKT++AR +A ++G + ++ G ++ + L ++ + + + F+ A K N
Sbjct: 373 MMFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGSQAVTKIHQIFDWAKKSNKGL 431
Query: 181 IIFIDELDAIAPKREKTH-GEVER 249
++FIDE DA +R T+ E +R
Sbjct: 432 LLFIDEADAFLCERNSTYMSEAQR 455
>At2g18330.1 68415.m02136 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family associated with
various cellular activities (AAA)
Length = 636
Score = 60.5 bits (140), Expect = 8e-10
Identities = 29/84 (34%), Positives = 53/84 (63%), Gaps = 2/84 (2%)
Frame = +1
Query: 4 ILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADK-NSPA 180
++ YGPPGTGKT++AR +A ++G + ++ G ++ + L ++ + + + F+ A K N
Sbjct: 388 MMFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAKKSNKGL 446
Query: 181 IIFIDELDAIAPKREKTH-GEVER 249
++FIDE DA +R T+ E +R
Sbjct: 447 LLFIDEADAFLCERNSTYMSEAQR 470
Score = 38.3 bits (85), Expect = 0.004
Identities = 17/57 (29%), Positives = 32/57 (56%)
Frame = +3
Query: 291 KSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDD 461
+S ++++ ATNRP +D A+ R D I+ +P R ++L+++ +GDD
Sbjct: 483 QSRDIVLVLATNRPGDLDSAVT--DRIDEVIEFPLPGEEERFKLLKLYLNKYLMGDD 537
>At5g16930.1 68418.m01984 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 644
Score = 59.7 bits (138), Expect = 1e-09
Identities = 31/84 (36%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Frame = +1
Query: 4 ILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA- 180
IL YGPPGTGKT+ AR +A +G + L+ G ++ + L ++ + + + F+ + K+
Sbjct: 401 ILFYGPPGTGKTMAARELARRSGLDYALMTGGDV-APLGAQAVTKIHQLFDWSKKSKRGL 459
Query: 181 IIFIDELDAIAPKREKTH-GEVER 249
++FIDE DA +R KT+ E +R
Sbjct: 460 LLFIDEADAFLCERNKTYMSEAQR 483
Score = 30.3 bits (65), Expect = 0.95
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +3
Query: 291 KSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 434
+S +++ ATNRP +D A+ R D ++ +P R ++L ++
Sbjct: 496 QSKDIVLALATNRPGDLDSAVA--DRIDETLEFPLPGEEERFKLLNLY 541
>At3g03060.1 68416.m00302 AAA-type ATPase family protein contains a
ATP/GTP-binding site motif A (P-loop), PROSITE:PS00017
Length = 639
Score = 58.4 bits (135), Expect = 3e-09
Identities = 30/84 (35%), Positives = 53/84 (63%), Gaps = 2/84 (2%)
Frame = +1
Query: 4 ILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA- 180
IL++GPPGTGKT+ AR +A ++G + L+ G ++ + L ++ + + + F+ K+
Sbjct: 400 ILLHGPPGTGKTMAARELARKSGLDYALMTGGDV-APLGAQAVTKIHELFDWGKKSKRGL 458
Query: 181 IIFIDELDAIAPKREKTH-GEVER 249
++FIDE DA +R KT+ E +R
Sbjct: 459 LLFIDEADAFLCERNKTYMSEAQR 482
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +3
Query: 291 KSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 434
+S +++ ATNRP +D A+ R D ++ +P R ++L ++
Sbjct: 495 QSKDIVLALATNRPGDLDSAVA--DRVDEVLEFPLPGEEERFKLLNLY 540
>At3g04340.1 68416.m00459 FtsH protease family protein similar to
chloroplast FtsH protease [Arabidopsis thaliana]
GI:1483215; contains Pfam profiles PF01434: Peptidase
family M41, PF00004: ATPase AAA family
Length = 960
Score = 51.6 bits (118), Expect = 4e-07
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKL-AGESESNLRKAFEEADKNSP 177
G+L+ G GTGKT +A A+A E + E+ + L G+S +N+R+ F+ A +P
Sbjct: 459 GVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSAANVRELFQTARDLAP 518
Query: 178 AIIFIDELDAIAPKREK 228
IIF+++ D A R K
Sbjct: 519 VIIFVEDFDLFAGVRGK 535
Score = 49.6 bits (113), Expect = 1e-06
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Frame = +3
Query: 246 KTYVSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEIL 425
+++++QLL +DG +K V++MA T ID ALRR GR DR + P R IL
Sbjct: 545 ESFINQLLVELDGFEKQDGVVLMATTRNHKQIDEALRRPGRMDRVFHLQSPTEMERERIL 604
Query: 426 R---IHTKNMKLGDDVDLEQIAAES 491
T + +L D VD +++ ++
Sbjct: 605 HNAAEETMDRELVDLVDWRKVSEKT 629
>At5g53350.1 68418.m06630 ATP-dependent Clp protease ATP-binding
subunit ClpX1 (CLPX) identical to CLP protease
regulatory subunit CLPX GI:2674203 from [Arabidopsis
thaliana]
Length = 579
Score = 43.6 bits (98), Expect = 1e-04
Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Frame = +1
Query: 4 ILMYGPPGTGKTLIARAVANETGAFFFLINGPEI-MSKLAGES-ESNLRKAFEEADKNSP 177
IL+ GP G+GKTL+A+ +A F + + + + GE ES L K AD N
Sbjct: 226 ILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVA 285
Query: 178 A----IIFIDELDAIAPKRE 225
A I++IDE+D I K E
Sbjct: 286 AAQQGIVYIDEVDKITKKAE 305
>At1g33360.1 68414.m04129 ATP-dependent Clp protease ATP-binding
subunit ClpX, putative similar to CLP protease
regulatory subunit CLPX GI:2674203 from [Arabidopsis
thaliana]
Length = 656
Score = 41.1 bits (92), Expect = 5e-04
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Frame = +1
Query: 4 ILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK--LAGESESNLRKAFEEADKNSP 177
+L+ GP G+GKTL+A+ +A F + + + + + ES L K A+ N
Sbjct: 311 VLLMGPTGSGKTLLAKTLARLVNVPFVIADATTLTQAGYVGDDVESILHKLLTVAEFNVQ 370
Query: 178 A----IIFIDELDAIAPKRE 225
A I++IDE+D I K E
Sbjct: 371 AAQQGIVYIDEVDKITKKAE 390
>At5g57480.1 68418.m07183 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family
Length = 520
Score = 39.9 bits (89), Expect = 0.001
Identities = 25/68 (36%), Positives = 38/68 (55%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G L+YGPPGTGK+ + A+AN G + + E+ S S LRK + +S +
Sbjct: 239 GYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEV------HSNSELRKLLMKT--SSKS 290
Query: 181 IIFIDELD 204
II I+++D
Sbjct: 291 IIVIEDID 298
>At4g30250.1 68417.m04301 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 512
Score = 39.9 bits (89), Expect = 0.001
Identities = 24/68 (35%), Positives = 39/68 (57%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G L+YGPPGTGK+ + A+AN G + + E+ ++ S LRK + +S +
Sbjct: 240 GYLLYGPPGTGKSSLIAAMANYLGYDIYDLELTEV------QNNSELRKLLMKT--SSKS 291
Query: 181 IIFIDELD 204
II I+++D
Sbjct: 292 IIVIEDID 299
>At5g49840.1 68418.m06172 ATP-dependent Clp protease ATP-binding
subunit ClpX, putative similar to CLP protease
regulatory subunit CLPX GI:2674203 from [Arabidopsis
thaliana]; non-consensus splice donor GC at exon 4;
non-consensus splice donor AA at exon 7
Length = 606
Score = 37.9 bits (84), Expect = 0.005
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Frame = +1
Query: 4 ILMYGPPGTGKTLIARAVANETGAFFFLINGPEI-MSKLAGES-ESNLRKAFE----EAD 165
+L+ GP G+GKTL+A+ +A F + + + + GE ES L K + +
Sbjct: 265 VLLLGPTGSGKTLLAKTLARIVNVPFAIADATSLTQAGYVGEDVESILYKLYVVSGCNVE 324
Query: 166 KNSPAIIFIDELDAIAPKREKTHG 237
+ I++IDE+D + K ++G
Sbjct: 325 EAQRGIVYIDEVDKMTMKSHSSNG 348
>At4g25835.1 68417.m03716 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family
Length = 506
Score = 37.1 bits (82), Expect = 0.008
Identities = 24/68 (35%), Positives = 38/68 (55%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G L+YGPPGTGK+ + A+AN + + E+ +S S LRK + +S +
Sbjct: 239 GYLLYGPPGTGKSSMIAAMANYLRYDIYDLELTEV------KSNSELRKLLMKT--SSKS 290
Query: 181 IIFIDELD 204
II I+++D
Sbjct: 291 IIVIEDID 298
>At5g17730.1 68418.m02079 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 470
Score = 36.7 bits (81), Expect = 0.011
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVAN 63
G L+YGPPGTGKT + A+AN
Sbjct: 247 GYLLYGPPGTGKTSLVAAIAN 267
>At3g50930.1 68416.m05576 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 576
Score = 36.7 bits (81), Expect = 0.011
Identities = 26/83 (31%), Positives = 41/83 (49%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G L+YGPPGTGK+ + A+AN F I E+ A + S LR+ S
Sbjct: 301 GYLLYGPPGTGKSSLIAAMANHLN---FDIYDLEL---TAVNNNSELRRLLIATANRS-- 352
Query: 181 IIFIDELDAIAPKREKTHGEVER 249
I+ ++++D +++T E R
Sbjct: 353 ILIVEDIDCSLELKDRTSDEPPR 375
>At5g50920.1 68418.m06315 ATP-dependent Clp protease ATP-binding
subunit / ClpC almost identical to ClpC GI:2921158 from
[Arabidopsis thaliana]; contains Pfam profile PF02861:
Clp amino terminal domain; contains Pfam profile
PF00004: ATPase, AAA family; contains Pfam profile
PF02151: UvrB/uvrC motif
Length = 929
Score = 35.9 bits (79), Expect = 0.019
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 12/79 (15%)
Frame = +1
Query: 10 MYGPPGTGKTLIARAVANE--TGAFFFLINGPEIMS----------KLAGESESNLRKAF 153
+ G PG GKT IA +A +G I G ++++ K GE E L+K
Sbjct: 300 LIGEPGVGKTAIAEGLAQRIASGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLM 359
Query: 154 EEADKNSPAIIFIDELDAI 210
EE ++ I+FIDE+ +
Sbjct: 360 EEIRQSDEIILFIDEVHTL 378
>At4g24710.1 68417.m03536 AAA-type ATPase family protein similar to
HPV16 E1 protein binding protein [Homo sapiens]
gi|2232019|gb|AAB64095; contains Pfam domain, PF00004:
ATPase, AAA family ('A'TPases 'A'ssociated with diverse
cellular 'A'ctivities)
Length = 467
Score = 35.9 bits (79), Expect = 0.019
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 14/88 (15%)
Frame = +1
Query: 4 ILMYGPPGTGKTLIARAVANETG---------AFFFLINGPEIMSKLAGESESNLRKAFE 156
IL++GPPGTGKT + +A+A + +N + SK ES + K F+
Sbjct: 205 ILLHGPPGTGKTSLCKALAQKLSIRCNSRYPHCQLIEVNAHSLFSKWFSESGKLVAKLFQ 264
Query: 157 E-----ADKNSPAIIFIDELDAIAPKRE 225
+ + + + IDE++++A R+
Sbjct: 265 KIQEMVEEDGNLVFVLIDEVESLAAARK 292
>At5g67630.1 68418.m08527 DNA helicase, putative similar to
RuvB-like DNA helicase reptin [Danio rerio] GI:27733814,
reptin [Drosophila melanogaster] GI:7243682
Length = 469
Score = 35.5 bits (78), Expect = 0.025
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = +1
Query: 4 ILMYGPPGTGKTLIARAVANETG--AFFFLINGPEIMSKLAGESESNLRKAFEEA 162
IL+ G PGTGKT IA +A G F +I G EI S ++E+ L ++F +A
Sbjct: 69 ILIAGQPGTGKTAIAMGMAKSLGLETPFAMIAGSEIFSLEMSKTEA-LTQSFRKA 122
>At3g28610.1 68416.m03571 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 473
Score = 35.5 bits (78), Expect = 0.025
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G L+YGPPGTGK+ + A+AN + I E+ A ++ S LRK S
Sbjct: 238 GYLLYGPPGTGKSTMIAAMAN---LLNYSIYDLEL---TAIQNNSELRKILTATSNKS-- 289
Query: 181 IIFIDELDA---IAPKREK 228
II I+++D + KR+K
Sbjct: 290 IIVIEDIDCSLDLTGKRKK 308
>At4g05380.1 68417.m00820 AAA-type ATPase family protein contains
similarity to mitochondrial ATPase (AAA family) Bcs1p,
Saccharomyces cerevisiae, Swiss Prot:P32839
Length = 248
Score = 35.1 bits (77), Expect = 0.034
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVAN 63
G L+YGPPGTGK+ + A+AN
Sbjct: 33 GYLLYGPPGTGKSSLVAAIAN 53
>At3g49830.1 68416.m05448 DNA helicase-related similar to DNA
helicase GI:4521249 from [Mus musculus]
Length = 473
Score = 35.1 bits (77), Expect = 0.034
Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = +1
Query: 4 ILMYGPPGTGKTLIARAVANETG--AFFFLINGPEIMSKLAGESESNLRKAFEEA 162
IL+ G PGTGK IA +A G F +I G EI S ++E+ L +AF +A
Sbjct: 69 ILIAGQPGTGKIAIAMGIAKSLGQETPFTMIAGSEIFSLEMSKTEA-LTQAFRKA 122
>At3g48870.1 68416.m05338 ATP-dependent Clp protease ATP-binding
subunit (ClpC) identical to AtClpC GI:5360574 from
[Arabidopsis thaliana]; contains Pfam profiles PF02861:
Clp amino terminal domain and PF02151: UvrB/uvrC motif
Length = 952
Score = 35.1 bits (77), Expect = 0.034
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 12/79 (15%)
Frame = +1
Query: 10 MYGPPGTGKTLIARAVANE--TGAFFFLINGPEIMS----------KLAGESESNLRKAF 153
+ G PG GKT IA +A +G I G +++ K GE E L+K
Sbjct: 321 LIGEPGVGKTAIAEGLAQRIASGDVPETIEGKTVITLDMGLLVAGTKYRGEFEERLKKLM 380
Query: 154 EEADKNSPAIIFIDELDAI 210
EE ++ I+FIDE+ +
Sbjct: 381 EEIRQSDEIILFIDEVHTL 399
>At3g28510.1 68416.m03561 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family
Length = 530
Score = 35.1 bits (77), Expect = 0.034
Identities = 23/68 (33%), Positives = 35/68 (51%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G L++GPPGTGK+ + A+AN FL + + S L+K D S +
Sbjct: 245 GYLLFGPPGTGKSTMIAAIAN------FLDYDVYDLELTTVKDNSELKKLL--LDTTSKS 296
Query: 181 IIFIDELD 204
II I+++D
Sbjct: 297 IIVIEDID 304
>At5g40000.1 68418.m04851 AAA-type ATPase family protein BCS1
nuclear gene encoding mitochondrial protein - Homo
sapiens, EMBL:AF026849 contains Pfam profile: ATPase
family PF00004
Length = 470
Score = 34.7 bits (76), Expect = 0.044
Identities = 25/71 (35%), Positives = 39/71 (54%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G L+YGPPGTGK+ + A+AN + I E+ A ++ S L+K +S +
Sbjct: 243 GYLLYGPPGTGKSTMISAMAN---LLNYNIYDLEL---TAVKNNSELKKLLTAT--SSKS 294
Query: 181 IIFIDELDAIA 213
II I+++D A
Sbjct: 295 IIVIEDIDCSA 305
>At5g22330.1 68418.m02605 TATA box-binding protein-interacting
protein-related similar to TATA box-binding
protein-interacting protein SP:O35753 from [ Mus
musculus]
Length = 458
Score = 34.7 bits (76), Expect = 0.044
Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Frame = +1
Query: 4 ILMYGPPGTGKTLIARAVANETGAF--FFLINGPEIMSKLAGESE---SNLRKAFEEADK 168
+L+ GPPGTGKT +A ++ E G+ F + G E+ S ++E N R+A K
Sbjct: 69 LLLAGPPGTGKTALALGISQELGSKVPFCPMVGSEVYSSEVKKTEVLMENFRRAIGLRIK 128
Query: 169 NSPAIIFIDELDAIAPKREKT 231
+ ++ E+ ++P+ ++
Sbjct: 129 ETKE-VYEGEVTELSPEETES 148
>At3g50940.1 68416.m05577 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 451
Score = 34.7 bits (76), Expect = 0.044
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVAN 63
G L+YGPPGTGK+ + A+AN
Sbjct: 249 GYLLYGPPGTGKSSLIAAIAN 269
>At1g43910.1 68414.m05066 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 475
Score = 34.7 bits (76), Expect = 0.044
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVAN 63
G L+YGPPGTGK+ + A+AN
Sbjct: 241 GYLLYGPPGTGKSSMVAAIAN 261
>At5g17760.2 68418.m02083 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 341
Score = 34.3 bits (75), Expect = 0.059
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVAN 63
G L+YGPPGTGK+ + A+AN
Sbjct: 255 GYLLYGPPGTGKSSLVAAMAN 275
>At5g17760.1 68418.m02082 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 505
Score = 34.3 bits (75), Expect = 0.059
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVAN 63
G L+YGPPGTGK+ + A+AN
Sbjct: 255 GYLLYGPPGTGKSSLVAAMAN 275
>At5g17740.1 68418.m02080 AAA-type ATPase family protein h-bcs1,
Homo sapiens, EMBL:AF026849 h-bcs1, Homo sapiens,
EMBL:AF026849 h-bcs1, Homo sapiens, EMBL:AF026849
contains Pfam profile: ATPase family PF00004
gene_id:K17E7.100 contains Pfam profile: ATPase family
PF00004
Length = 533
Score = 34.3 bits (75), Expect = 0.059
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVAN 63
G L+YGPPGTGK+ + A+AN
Sbjct: 247 GYLLYGPPGTGKSSLVAAMAN 267
>At3g28600.1 68416.m03570 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 475
Score = 34.3 bits (75), Expect = 0.059
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G L++GPPGTGK+ + A+AN + I E+ A + S LRK +S +
Sbjct: 238 GYLLHGPPGTGKSTMIAAMANHLN---YSIYDLEL---TAIRNNSELRKLLTAT--SSKS 289
Query: 181 IIFIDELDA---IAPKREK 228
II I+++D + KR+K
Sbjct: 290 IIVIEDIDCSLDLTGKRKK 308
>At3g28570.1 68416.m03567 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 451
Score = 33.9 bits (74), Expect = 0.077
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVAN 63
G L+YGPPGTGK+ + A+AN
Sbjct: 238 GYLLYGPPGTGKSTMIAAMAN 258
>At2g18193.1 68415.m02117 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 495
Score = 33.9 bits (74), Expect = 0.077
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVAN 63
G L+YGPPGTGK+ + A+AN
Sbjct: 245 GYLLYGPPGTGKSSLIAAMAN 265
>At2g18190.1 68415.m02116 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 494
Score = 33.9 bits (74), Expect = 0.077
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVAN 63
G L+YGPPGTGK+ + A+AN
Sbjct: 246 GYLLYGPPGTGKSSLIAAMAN 266
>At1g21690.2 68414.m02715 replication factor C 37 kDa, putative
Similar to SWISS-PROT:P35249 activator 1 37 kDa subunit
(Replication factor C 37 kDa subunit, A1 37 kDa
subunit, RF-C 37 kDa subunit, RFC37) [Homo sapiens];
contains Pfam domain, PF00004: ATPase, AAA family
Length = 327
Score = 33.5 bits (73), Expect = 0.10
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +1
Query: 4 ILMYGPPGTGKTLIARAVANE 66
+L YGPPGTGKT A A+A++
Sbjct: 33 MLFYGPPGTGKTTTALAIAHQ 53
>At1g21690.1 68414.m02714 replication factor C 37 kDa, putative
Similar to SWISS-PROT:P35249 activator 1 37 kDa subunit
(Replication factor C 37 kDa subunit, A1 37 kDa subunit,
RF-C 37 kDa subunit, RFC37) [Homo sapiens]; contains
Pfam domain, PF00004: ATPase, AAA family
Length = 339
Score = 33.5 bits (73), Expect = 0.10
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +1
Query: 4 ILMYGPPGTGKTLIARAVANE 66
+L YGPPGTGKT A A+A++
Sbjct: 45 MLFYGPPGTGKTTTALAIAHQ 65
>At3g28580.1 68416.m03568 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 500
Score = 33.1 bits (72), Expect = 0.14
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 180
G L++GPPGTGK+ + A+AN FL + + ++LR+ E S
Sbjct: 242 GYLLFGPPGTGKSTMIAAMAN------FLEYDVYDLELTTVKDNTHLRRLLIETSAKS-- 293
Query: 181 IIFIDELDA---IAPKREKTHGEVE 246
II I+++D + +R+K E E
Sbjct: 294 IIVIEDIDCSLNLTGQRKKKEEEEE 318
>At3g28520.1 68416.m03562 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 478
Score = 33.1 bits (72), Expect = 0.14
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVAN 63
G L++GPPGTGK+ + A+AN
Sbjct: 230 GYLLFGPPGTGKSTMISAIAN 250
>At5g40010.1 68418.m04852 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 514
Score = 32.3 bits (70), Expect = 0.24
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVAN 63
G L++GPPGTGK+ + A+AN
Sbjct: 245 GYLLFGPPGTGKSTMIAAMAN 265
>At3g28540.1 68416.m03564 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 510
Score = 32.3 bits (70), Expect = 0.24
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVAN 63
G L++GPPGTGK+ + A+AN
Sbjct: 241 GYLLFGPPGTGKSTMISAMAN 261
>At3g20410.1 68416.m02585 calmodulin-domain protein kinase isoform 9
(CPK9) identical to calmodulin-domain protein kinase
CDPK isoform 9 [Arabidopsis thaliana]
gi|1399265|gb|AAB03242
Length = 541
Score = 32.3 bits (70), Expect = 0.24
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +1
Query: 124 ESESNLRKAFEEADKNSPAIIFIDELDA 207
ES NL KAF+ DK+S I IDEL++
Sbjct: 464 ESNENLYKAFQHFDKDSSGYITIDELES 491
>At1g24290.1 68414.m03065 AAA-type ATPase family protein similar to
Werner helicase interacting protein [Homo sapiens]
GI:14349166; contains Pfam profiles PF00004: ATPase
family associated with various cellular activities
(AAA), PF00627: UBA/TS-N domain; contains
ATP/GTP-binding site motif A (P-loop)
Length = 525
Score = 32.3 bits (70), Expect = 0.24
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +1
Query: 4 ILMYGPPGTGKTLIARAVANET 69
I+ +GPPGTGKT IA+++ N +
Sbjct: 140 IVFWGPPGTGKTSIAKSLINSS 161
>At4g21880.1 68417.m03164 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 845
Score = 31.9 bits (69), Expect = 0.31
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +3
Query: 264 LLTLMDGMKKSSHVIVMAATNRPNS-IDPALRRFGRFDREIDIGIPDAT 407
L L DG++ S++I AT PNS ++ A+ +F + E+DI +P +T
Sbjct: 285 LSILQDGVETVSNLIFSYATCIPNSTVEDAIFKFNKLHEELDI-VPSST 332
>At1g77470.1 68414.m09021 replication factor C 36 kDA, putative
similar to SWISS-PROT:P40937 activator 1 36 kDa subunit
(Replication factor C 36 kDa subunit, A1 36 kDa subunit,
RF-C 36 kDa subunit, RFC36) [Homo sapiens]
Length = 369
Score = 31.9 bits (69), Expect = 0.31
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +1
Query: 4 ILMYGPPGTGKTLIARAVANE 66
+L+YGPPGTGKT AVA +
Sbjct: 75 LLLYGPPGTGKTSTILAVARK 95
>At1g67120.1 68414.m07636 midasin-related similar to Midasin
(MIDAS-containing protein) (Swiss-Prot:Q12019)
[Saccharomyces cerevisiae]; similar to Midasin
(MIDAS-containing protein) (Swiss-Prot:Q9NU22) [Homo
sapiens]; contains Prosite PS00017: ATP/GTP-binding site
motif A (P-loop)
Length = 5336
Score = 31.9 bits (69), Expect = 0.31
Identities = 11/23 (47%), Positives = 19/23 (82%)
Frame = +1
Query: 4 ILMYGPPGTGKTLIARAVANETG 72
+L+YGP G+GK+ + R +A+E+G
Sbjct: 356 VLLYGPSGSGKSALIRKLADESG 378
>At5g11250.1 68418.m01314 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1189
Score = 31.5 bits (68), Expect = 0.41
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +1
Query: 10 MYGPPGTGKTLIARAVANETGAFFFL 87
++GPPG GKT IAR V N+ F L
Sbjct: 262 IWGPPGIGKTTIARVVYNQLSHSFQL 287
>At3g05780.1 68416.m00649 Lon protease, putative similar to Lon
protease homolog 2 SP:P93655
Length = 924
Score = 31.5 bits (68), Expect = 0.41
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 9/78 (11%)
Frame = +1
Query: 4 ILMYGPPGTGKTLIARAVAN--ETGAFFFLINGPEIMSKLAGESES-------NLRKAFE 156
I + GPPG GKT I R++A + F F + G ++++ G ++ + + +
Sbjct: 443 ICLSGPPGVGKTSIGRSIARALDRKFFRFSVGGLSDVAEIKGHCQTYVGAMPGKMVQCLK 502
Query: 157 EADKNSPAIIFIDELDAI 210
+P I+F DE+D +
Sbjct: 503 SVGTANPLILF-DEIDKL 519
>At3g24530.1 68416.m03080 AAA-type ATPase family protein / ankyrin
repeat family protein contains Pfam profiles: PF00023
ankyrin repeat, PF00004 ATPase family associated with
various cellular activities (AAA)
Length = 481
Score = 31.1 bits (67), Expect = 0.55
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Frame = +1
Query: 16 GPPGTGKTLIARAVANETGAFFFL-------INGPEIMSKLAGESESNLRKAFEEADKNS 174
G PGTGKT++AR + L + +++ + G + R+ +EA+
Sbjct: 252 GNPGTGKTMVARVLGKLLNTVGILPTDKVTEVQRTDLVGEFVGHTGPKTRRKIQEAE--- 308
Query: 175 PAIIFIDELDAIAPKRE 225
I+F+DE + P ++
Sbjct: 309 GGILFVDEAYRLIPMQK 325
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 31.1 bits (67), Expect = 0.55
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +1
Query: 85 LINGPEIMSKLAGESESNLRKAFEEADKNS--PAIIFIDELDAIAPKREKTHGEVERRM 255
+I G ++ S + E+E +RK+ E D +S P ++F+ ++ AI K G RM
Sbjct: 367 IIGGDDVDSSVLAEAEL-VRKSIEACDSSSDSPCVVFVSKMFAIPMKMIPQDGNHRERM 424
>At4g08450.1 68417.m01393 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1234
Score = 27.1 bits (57), Expect(2) = 0.68
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 10 MYGPPGTGKTLIARAVAN 63
++GP G GKT IARA+ N
Sbjct: 207 IWGPTGIGKTTIARALFN 224
Score = 22.2 bits (45), Expect(2) = 0.68
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +1
Query: 100 EIMSKLAGES--ESNLRKAFEEADKNSPAIIFIDELD 204
+++SKL + E N A +E + +IFID+LD
Sbjct: 265 KLLSKLLDKKNLEINHLDAVKERLRQMKVLIFIDDLD 301
>At5g26860.1 68418.m03204 Lon protease homolog 2, mitochondrial
almost identical to Lon protease homolog 2
mitochondrial precursor SP:P93655, GI:1848290 from
[Arabidopsis thaliana]
Length = 940
Score = 30.7 bits (66), Expect = 0.72
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 4 ILMYGPPGTGKTLIARAVANETGAFFF 84
I + GPPG GKT I R++A FF
Sbjct: 460 ICLSGPPGVGKTSIGRSIARALNRKFF 486
>At5g17750.1 68418.m02081 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 392
Score = 30.7 bits (66), Expect = 0.72
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +1
Query: 10 MYGPPGTGKTLIARAVAN 63
+YGPPGTGK+ + A+AN
Sbjct: 225 LYGPPGTGKSSLVAAMAN 242
>At3g49210.1 68416.m05378 expressed protein
Length = 518
Score = 30.7 bits (66), Expect = 0.72
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = -2
Query: 445 MFLVCMRRISRRPVASGMPMSISRSNRPKRRSAGSMEFGRFVAAITITW 299
+ L CMR+ S +P S+R R AGS RF+ + + W
Sbjct: 174 LVLACMRKTSNPDELPSLPNQNRSSSRSSRLMAGSRGDSRFLWLVMVIW 222
>At2g39730.3 68415.m04879 ribulose bisphosphate
carboxylase/oxygenase activase / RuBisCO activase
identical to SWISS-PROT:P10896 ribulose bisphosphate
carboxylase/oxygenase activase, chloroplast precursor
(RuBisCO activase, RA)[Arabidopsis thaliana]
Length = 441
Score = 30.7 bits (66), Expect = 0.72
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Frame = +1
Query: 10 MYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA----DKNSP 177
++G G GK+ V + G +++ E+ S AGE +R+ + EA K
Sbjct: 163 IWGGKGQGKSFQCELVMAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIKKGKM 222
Query: 178 AIIFIDELDA 207
+FI++LDA
Sbjct: 223 CCLFINDLDA 232
>At2g39730.2 68415.m04878 ribulose bisphosphate
carboxylase/oxygenase activase / RuBisCO activase
identical to SWISS-PROT:P10896 ribulose bisphosphate
carboxylase/oxygenase activase, chloroplast precursor
(RuBisCO activase, RA)[Arabidopsis thaliana]
Length = 446
Score = 30.7 bits (66), Expect = 0.72
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Frame = +1
Query: 10 MYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA----DKNSP 177
++G G GK+ V + G +++ E+ S AGE +R+ + EA K
Sbjct: 163 IWGGKGQGKSFQCELVMAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIKKGKM 222
Query: 178 AIIFIDELDA 207
+FI++LDA
Sbjct: 223 CCLFINDLDA 232
>At2g39730.1 68415.m04877 ribulose bisphosphate
carboxylase/oxygenase activase / RuBisCO activase
identical to SWISS-PROT:P10896 ribulose bisphosphate
carboxylase/oxygenase activase, chloroplast precursor
(RuBisCO activase, RA)[Arabidopsis thaliana]
Length = 474
Score = 30.7 bits (66), Expect = 0.72
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Frame = +1
Query: 10 MYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA----DKNSP 177
++G G GK+ V + G +++ E+ S AGE +R+ + EA K
Sbjct: 163 IWGGKGQGKSFQCELVMAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIKKGKM 222
Query: 178 AIIFIDELDA 207
+FI++LDA
Sbjct: 223 CCLFINDLDA 232
>At3g04220.1 68416.m00446 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 896
Score = 30.3 bits (65), Expect = 0.95
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +1
Query: 10 MYGPPGTGKTLIARAVANE 66
++GPPG GKT IAR++ N+
Sbjct: 263 IWGPPGVGKTTIARSLYNQ 281
>At3g44630.3 68416.m04798 disease resistance protein RPP1-WsB-like
(TIR-NBS-LRR class), putative domain signature
TIR-NBS-LRR exists, suggestive of a disease resistance
protein., closest Col-0 homolog to RPP1-WsB
Length = 1240
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 10 MYGPPGTGKTLIARAVANETGAFFFL 87
++GPPG GKT IAR + N+ F L
Sbjct: 294 IWGPPGIGKTTIARFLLNQVSDRFQL 319
>At3g44630.2 68416.m04800 disease resistance protein RPP1-WsB-like
(TIR-NBS-LRR class), putative domain signature
TIR-NBS-LRR exists, suggestive of a disease resistance
protein., closest Col-0 homolog to RPP1-WsB
Length = 1214
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 10 MYGPPGTGKTLIARAVANETGAFFFL 87
++GPPG GKT IAR + N+ F L
Sbjct: 294 IWGPPGIGKTTIARFLLNQVSDRFQL 319
>At3g44630.1 68416.m04799 disease resistance protein RPP1-WsB-like
(TIR-NBS-LRR class), putative domain signature
TIR-NBS-LRR exists, suggestive of a disease resistance
protein., closest Col-0 homolog to RPP1-WsB
Length = 1214
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 10 MYGPPGTGKTLIARAVANETGAFFFL 87
++GPPG GKT IAR + N+ F L
Sbjct: 294 IWGPPGIGKTTIARFLLNQVSDRFQL 319
>At2g34440.1 68415.m04225 MADS-box family protein similar to
SP|Q9XGJ4 MADS box protein GGM13 {Gnetum gnemon};
contains Pfam profile PF00319: SRF-type transcription
factor (DNA-binding and dimerisation domain)
Length = 172
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +1
Query: 85 LINGPEIMSKLAGE-SESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGEVERRMFH 261
L+N K GE S+ L A +E K S + +DEL+ + + HG +E ++ H
Sbjct: 100 LLNQEVEAEKERGEKSQEKLESAGDERFKESIETLTLDELNEYKDRLQTVHGRIEGQVNH 159
>At3g44480.1 68416.m04781 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1194
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 10 MYGPPGTGKTLIARAVANETGAFFFL 87
++GPPG GKT IAR + N+ F L
Sbjct: 298 IWGPPGIGKTTIARFLFNQVSDRFQL 323
>At1g73170.1 68414.m08466 expressed protein
Length = 666
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +1
Query: 4 ILMYGPPGTGKTLIARAVANETG 72
+L+ GPPG GKT + R VA G
Sbjct: 200 LLLIGPPGVGKTTMIREVARMLG 222
>At1g71320.1 68414.m08232 S locus F-box-related / SLF-related
contains F-box domain Pfam:PF00646; contains TIGRFAM
TIGR01640: F-box protein interaction domain; similar to
S locus F-box (SLF)-S2-like protein (GI:13161528)
[Antirrhinum hispanicum]
Length = 392
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -3
Query: 279 PLASITVKHTSFHFTVGFLSLWCNSIEFINEDNSR 175
P ++ H S HFT F+ + NSI F+ E SR
Sbjct: 61 PTPNMKFLHISQHFTANFVEEYSNSITFLLETFSR 95
>At1g04730.1 68414.m00469 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 954
Score = 29.5 bits (63), Expect = 1.7
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +1
Query: 4 ILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESE-SNLRKAFEEADKNSPA 180
+L+ G PG GKT +A A G IN + S A E+ ++ + + P
Sbjct: 348 LLLCGAPGLGKTTLAHIAAKHCGYRVVEINASDERSASAIETRILDVVQMNSVTADSRPK 407
Query: 181 IIFIDELD 204
+ IDE+D
Sbjct: 408 CLVIDEID 415
>At5g58120.1 68418.m07272 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1046
Score = 29.1 bits (62), Expect = 2.2
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 10 MYGPPGTGKTLIARAVANETGAFFFL 87
+YGP G GKT IARA+ + + F L
Sbjct: 215 IYGPAGIGKTTIARALHSRLSSSFQL 240
>At5g51070.1 68418.m06330 ATP-dependent Clp protease ATP-binding
subunit (ClpD), (ERD1) SAG15/ERD1; identical to ERD1
protein GI:497629, SP:P42762 from [Arabidopsis
thaliana]; contains Pfam profile PF02861: Clp amino
terminal domain
Length = 945
Score = 29.1 bits (62), Expect = 2.2
Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 13/81 (16%)
Frame = +1
Query: 7 LMYGPPGTGKTLIARAVA---NETGAFFFLINGPEIMS----------KLAGESESNLRK 147
++ G G GKT IA +A E A FL+ IMS K GE E+ +
Sbjct: 313 ILLGEAGVGKTAIAEGLAISIAEASAPGFLLT-KRIMSLDIGLLMAGAKERGELEARVTA 371
Query: 148 AFEEADKNSPAIIFIDELDAI 210
E K+ I+FIDE+ +
Sbjct: 372 LISEVKKSGKVILFIDEVHTL 392
>At5g40910.1 68418.m04967 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Non-consensus TT donor splice site at exon 1
Length = 1104
Score = 29.1 bits (62), Expect = 2.2
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 10 MYGPPGTGKTLIARAVANETGAFFFL 87
++GP G GKT IARA+ N+ F L
Sbjct: 211 IWGPAGIGKTTIARALFNQLSTGFRL 236
>At5g22010.1 68418.m02561 AAA-type ATPase family protein / BRCT
domain-containing protein contains Pfam profiles:
PF00533 BRCA1 C Terminus (BRCT) domain, PF00004 ATPase
family associated with various cellular activities (AAA)
Length = 956
Score = 29.1 bits (62), Expect = 2.2
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +1
Query: 4 ILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNS 174
+L+ G PG GKT A+ V+ G +N S G++ SN+ K ++ NS
Sbjct: 396 VLLSGTPGIGKTTSAKLVSQMLGFQAVEVNA----SDSRGKANSNIAKGIGGSNANS 448
>At5g18350.1 68418.m02159 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1193
Score = 29.1 bits (62), Expect = 2.2
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 16 GPPGTGKTLIARAVANETGAFFFL 87
GPPG GKT IARA+ ++ F L
Sbjct: 221 GPPGIGKTTIARALRDQISENFQL 244
>At2g41860.2 68415.m05174 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calmodulin-domain protein
kinase CDPK isoform 7 [Arabidopsis thaliana]
gi|1399277|gb|AAB03247
Length = 530
Score = 29.1 bits (62), Expect = 2.2
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +1
Query: 127 SESNLRKAFEEADKNSPAIIFIDEL-DAIAPKREKTHGEV 243
++ +L+KAF DKN I I+EL DA+A + T EV
Sbjct: 428 NDEHLKKAFTFFDKNKSGYIEIEELRDALADDVDTTSEEV 467
>At2g41860.1 68415.m05173 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calmodulin-domain protein
kinase CDPK isoform 7 [Arabidopsis thaliana]
gi|1399277|gb|AAB03247
Length = 425
Score = 29.1 bits (62), Expect = 2.2
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +1
Query: 127 SESNLRKAFEEADKNSPAIIFIDEL-DAIAPKREKTHGEV 243
++ +L+KAF DKN I I+EL DA+A + T EV
Sbjct: 323 NDEHLKKAFTFFDKNKSGYIEIEELRDALADDVDTTSEEV 362
>At2g14080.1 68415.m01566 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1215
Score = 29.1 bits (62), Expect = 2.2
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 10 MYGPPGTGKTLIARAVANETGAFFFL 87
++GPPG GKT I R + N+ + F L
Sbjct: 256 IWGPPGIGKTTIVRFLYNQLSSSFEL 281
>At5g41540.1 68418.m05048 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1038
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 10 MYGPPGTGKTLIARAVANETGAFF 81
++GP G GKT IARA+ N+ F
Sbjct: 210 IWGPAGIGKTTIARALYNQLSTNF 233
>At3g25510.1 68416.m03172 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1981
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 10 MYGPPGTGKTLIARAVANETGAFFFL 87
++GPPG GKT IAR + ++ F L
Sbjct: 228 IWGPPGIGKTTIARFLLSQVSKSFQL 253
>At1g50700.1 68414.m05701 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calmodulin-domain protein
kinase CDPK isoform 9 [Arabidopsis thaliana]
gi|1399265|gb|AAB03242
Length = 521
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 124 ESESNLRKAFEEADKNSPAIIFIDELDA 207
ES N+ KAF+ DK+ I DEL+A
Sbjct: 446 ESNENVYKAFQHFDKDGSGYITTDELEA 473
>At1g06720.1 68414.m00714 expressed protein contains Pfam domain,
PF04950: Protein of unknown function (DUF663)
Length = 1147
Score = 28.7 bits (61), Expect = 2.9
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = +1
Query: 4 ILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAI 183
+++ GPPG GK+L+ +++ E F N PE+ + R F E + A+
Sbjct: 86 VVVQGPPGVGKSLVIKSLVKE----FTKQNVPEVRGPITIVQGKQRRFQFVECPNDINAM 141
Query: 184 I 186
+
Sbjct: 142 V 142
>At5g41750.2 68418.m05081 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1068
Score = 28.3 bits (60), Expect = 3.8
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 10 MYGPPGTGKTLIARAVANETGAFF 81
++GP G GKT IAR + N+ + F
Sbjct: 212 IWGPAGIGKTTIARTLFNKISSIF 235
>At5g41750.1 68418.m05080 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1068
Score = 28.3 bits (60), Expect = 3.8
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 10 MYGPPGTGKTLIARAVANETGAFF 81
++GP G GKT IAR + N+ + F
Sbjct: 212 IWGPAGIGKTTIARTLFNKISSIF 235
>At5g41550.1 68418.m05049 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1085
Score = 28.3 bits (60), Expect = 3.8
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 10 MYGPPGTGKTLIARAVANETGAFFFL 87
++GP G GK+ IARA+ N+ + F L
Sbjct: 212 IWGPAGIGKSTIARALYNQLSSSFQL 237
>At4g11170.1 68417.m01809 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1095
Score = 28.3 bits (60), Expect = 3.8
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +1
Query: 10 MYGPPGTGKTLIARAVANE 66
++GP G GKT IARA+ N+
Sbjct: 210 IWGPAGVGKTTIARALYNQ 228
>At2g46620.1 68415.m05815 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 491
Score = 28.3 bits (60), Expect = 3.8
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1
Query: 7 LMYGPPGTGKTLIARAVAN 63
L+YGP GTGK+ A+AN
Sbjct: 235 LLYGPSGTGKSSFVAAMAN 253
>At1g63160.1 68414.m07138 replication factor C 40 kDa, putative
similar to SWISS-PROT:Q9WUK4 activator 1 40 kDa subunit
(Replication factor C 40 kDa subunit, A1 40 kDa subunit,
RF-C 40 kDa subunit, RFC40) [Mus musculus]
Length = 333
Score = 28.3 bits (60), Expect = 3.8
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +1
Query: 4 ILMYGPPGTGKTLIARAVANE 66
+++ GPPGTGKT A+A+E
Sbjct: 51 LILSGPPGTGKTTSILALAHE 71
>At1g05990.1 68414.m00627 calcium-binding protein, putative strong
similarity to calcium-binding protein [Lotus japonicus]
GI:18413495; contains INTERPRO:IPR002048 calcium-binding
EF-hand domain
Length = 150
Score = 28.3 bits (60), Expect = 3.8
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 124 ESESNLRKAFEEADKNSPAIIFIDELDAI 210
E E ++++AF D+N I +DEL A+
Sbjct: 75 EEEEDMKEAFNVFDQNGDGFITVDELKAV 103
>At5g44320.1 68418.m05427 eukaryotic translation initiation factor 3
subunit 7, putative / eIF-3 zeta, putative / eIF3d,
putative similar to initiation factor 3d [Arabidopsis
thaliana] GI:12407755, SP|O15371 Eukaryotic translation
initiation factor 3 subunit 7 (eIF-3 zeta) (eIF3 p66)
(eIF3d) {Homo sapiens}; contains Pfam profile PF05091:
Eukaryotic translation initiation factor 3 subunit 7
(eIF-3)
Length = 588
Score = 27.9 bits (59), Expect = 5.1
Identities = 17/68 (25%), Positives = 29/68 (42%)
Frame = +3
Query: 369 FDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLEQIAAESHGHVGAISRXLCSEAALQQ 548
+DR D P A RLE + + + DD+ + ++A E V A L + +
Sbjct: 220 YDRSFDRITPKADRRLERFKNRSFKVTTSDDLVIRRLAKEDKATVFATDAILAALMCAPR 279
Query: 549 ILRRWILI 572
+ W L+
Sbjct: 280 SVYSWDLV 287
>At5g38340.1 68418.m04627 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1059
Score = 27.9 bits (59), Expect = 5.1
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -2
Query: 307 ITWDDFFMPSISVNNCETYVFPLH 236
I WD F M S+ N C TY+ LH
Sbjct: 639 IEWDYFPMKSLPSNFCTTYLVNLH 662
>At3g05790.1 68416.m00650 Lon protease, putative similar to Lon
protease homolog 2 SP:P93655
Length = 942
Score = 27.9 bits (59), Expect = 5.1
Identities = 21/88 (23%), Positives = 41/88 (46%), Gaps = 9/88 (10%)
Frame = +1
Query: 4 ILMYGPPGTGKTLIARAVAN--ETGAFFFLINGPEIMSKLAGESES-------NLRKAFE 156
I + GP G GKT I R++A + F F + G ++++ G + + + +
Sbjct: 452 ICLSGPTGVGKTSIGRSIARALDRKFFRFSVGGLSDVAEIKGHRRTYIGAMPGKMVQCLK 511
Query: 157 EADKNSPAIIFIDELDAIAPKREKTHGE 240
+P ++ IDE+D + + HG+
Sbjct: 512 NVGTENP-LVLIDEIDKLGVRGH--HGD 536
>At1g61950.1 68414.m06988 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calcium-dependent protein
kinase GI:3283996 from [Nicotiana tabacum]; contains
protein kinase domain, Pfam:PF00069; contains EF hand
domain (calcium-binding EF-hand), Pfam:PF00036,
INTERPRO:IPR002048
Length = 551
Score = 27.9 bits (59), Expect = 5.1
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +1
Query: 34 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELD 204
K L+ A + G ++ M++ E E NL KAF+ DK++ I EL+
Sbjct: 442 KQLLEDADVDGNGTIDYIEFISATMNRFRVEREDNLFKAFQHFDKDNSGFISRQELE 498
>At1g13280.1 68414.m01542 allene oxide cyclase family protein
similar to ERD12 [GI:15320414], allene oxide cyclase
GI:8977961 from [Lycopersicon esculentum]; contains Pfam
profile PF06351: Allene oxide cyclase
Length = 254
Score = 27.9 bits (59), Expect = 5.1
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +1
Query: 31 GKTLIARAVANETGAFFFLI--NGPEIMSKLAGESESNLRKAFEEADKNSPAII 186
G + AR+ + TG FF I + S+ E N+ + F E D+NSPA++
Sbjct: 48 GLSTRARSTTSSTGGFFRTICSSSSNDYSRPTKIQELNVYE-FNEGDRNSPAVL 100
>At5g47010.1 68418.m05794 RNA helicase, putative similar to type 1
RNA helicase pNORF1 [Homo sapiens] GI:1885356
Length = 1254
Score = 27.5 bits (58), Expect = 6.7
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1
Query: 7 LMYGPPGTGKTLIARAV 57
L+ GPPGTGKT+ + A+
Sbjct: 507 LIQGPPGTGKTVTSAAI 523
>At5g18360.1 68418.m02160 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 900
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 10 MYGPPGTGKTLIARAVANETGAFF 81
++GP G GKT IARA+ N F
Sbjct: 212 IWGPAGIGKTTIARALFNRLSENF 235
>At5g13360.1 68418.m01539 auxin-responsive GH3 family protein
similar to auxin-responsive GH3 product [Glycine max]
GI:18591; contains Pfam profile PF03321: GH3
auxin-responsive promoter
Length = 594
Score = 27.5 bits (58), Expect = 6.7
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +2
Query: 230 PTVKWKDVCFTVIDANGWHEEV-VPRDRDGGHEPAE 334
P K +V +T+I + E + V +D + GH+PAE
Sbjct: 339 PLSKPNEVSYTIIPCMAYFEFLEVEKDYESGHDPAE 374
>At4g15570.1 68417.m02379 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 818
Score = 27.5 bits (58), Expect = 6.7
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Frame = +1
Query: 4 ILMYGPPGTGKT----LIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKN 171
+L+ GPPGTGKT I A+ + T A + ++ + +++ + +
Sbjct: 276 VLIQGPPGTGKTQTILSILGAIMHATPA---RVQSKGTDHEVKRGIQMTIQEKYNHWGRA 332
Query: 172 SPAIIFIDELDAIAPK 219
SP I+ ++ DAI P+
Sbjct: 333 SPWILGVNPRDAIMPE 348
>At3g30842.1 68416.m03968 ABC transporter protein, putative similar
to pleiotropic drug resistance like protein [Nicotiana
tabacum] GI:20522008, ABC1 protein [Nicotiana
plumbaginifolia] GI:14331118; contains Pfam profile
PF00005: ABC transporter
Length = 1406
Score = 27.5 bits (58), Expect = 6.7
Identities = 9/21 (42%), Positives = 17/21 (80%)
Frame = +1
Query: 7 LMYGPPGTGKTLIARAVANET 69
L+ GPPG+GK+ + +A++ +T
Sbjct: 176 LLLGPPGSGKSTLLKALSGKT 196
>At1g63740.1 68414.m07213 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 992
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 10 MYGPPGTGKTLIARAV 57
+YGP G GKT IARA+
Sbjct: 171 IYGPAGIGKTTIARAL 186
>At5g47040.1 68418.m05797 Lon protease homolog 1, mitochondrial
(LON) identical to Lon protease homolog 1 mitochondrial
precursor SP:O64948 from [Arabidopsis thaliana]
Length = 888
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 16 GPPGTGKTLIARAVANETGAFF 81
GPPG GKT +A ++A G F
Sbjct: 408 GPPGVGKTSLASSIAAALGRKF 429
>At5g20490.1 68418.m02435 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]; myosin-like protein
my5, common sunflower, PIR:T14279
Length = 1545
Score = 27.1 bits (57), Expect = 8.9
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 124 ESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGEVER 249
++ NLRKAF EA+ + + EL+ K ++ H V+R
Sbjct: 1008 QAAENLRKAFSEAEARNSEL--ATELENATRKADQLHESVQR 1047
>At5g18370.1 68418.m02161 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1210
Score = 27.1 bits (57), Expect = 8.9
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFF 81
GIL GPPG GKT IAR + ++ F
Sbjct: 259 GIL--GPPGIGKTTIARVLYDQISEKF 283
>At4g30100.1 68417.m04280 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 1311
Score = 27.1 bits (57), Expect = 8.9
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +1
Query: 7 LMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKA 150
L+ GPPGTGKT + N + ++ KLA ES + ++
Sbjct: 663 LVQGPPGTGKTHTVWGMLNVIHLVQYQQYYTSLLKKLAPESYKQVNES 710
>At2g26930.1 68415.m03230 4-diphosphocytidyl-2-C-methyl-D-erythritol
kinase (CMK) (CDPMEK) identical to
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase,
chloroplast precursor (CMK)
(4-(cytidine-5'-diphospho)-2-C-methyl- D-erythritol
kinase)(CDPMEK) [Arabidopsis thaliana] SWISS-PROT:O81014
Length = 383
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -2
Query: 487 SAAICSRSTSSPSFMFLVCMRRISRRPVASG 395
S +IC P+F L ++R+ +R +ASG
Sbjct: 280 SQSICVNDLEPPAFSVLPSLKRLKQRIIASG 310
>At2g22620.1 68415.m02681 expressed protein
Length = 677
Score = 27.1 bits (57), Expect = 8.9
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 1 GILMYGPPGTGKTLIARAVANETGAFFFLING-PEIMSKL 117
G L+Y PP G TL V + T F++ + P +M+KL
Sbjct: 471 GPLVYEPPRNGPTLWEIGVPDRTAGEFYIPDPYPTLMNKL 510
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,118,696
Number of Sequences: 28952
Number of extensions: 207159
Number of successful extensions: 1089
Number of sequences better than 10.0: 155
Number of HSP's better than 10.0 without gapping: 930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1055
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1112061928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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