Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20174
         (622 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.        26   0.84 
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    24   4.5  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    24   4.5  
AY146739-1|AAO12099.1|  176|Anopheles gambiae odorant-binding pr...    23   7.8  

>DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.
          Length = 418

 Score = 26.2 bits (55), Expect = 0.84
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +3

Query: 102 PTTYIIKTPTRFTNYTPTALRYGTPRALALLRE 200
           PT   ++ P  FT    TA RYG PR++  +++
Sbjct: 210 PTNATVERPF-FTGRMHTAARYGGPRSVPFMKQ 241


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +2

Query: 8   SRHVEMKSAFICFCFLAIASAPPPSVSKQ 94
           +R +E    F+C C   + +APP    +Q
Sbjct: 478 ARQLEGLKLFLCDCVSKVRAAPPTPPERQ 506


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +1

Query: 301 GKNHESAEEQPMIDLSDSVTEA 366
           GKNH S++  P    S S++ A
Sbjct: 233 GKNHSSSKNMPRSSTSKSISSA 254


>AY146739-1|AAO12099.1|  176|Anopheles gambiae odorant-binding
           protein AgamOBP29 protein.
          Length = 176

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +1

Query: 199 SPVDGAGFRTGYNSASFDVKR 261
           +PV+G   RTG   ++ DVKR
Sbjct: 34  APVEGLRCRTGEGPSADDVKR 54


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 673,467
Number of Sequences: 2352
Number of extensions: 13546
Number of successful extensions: 67
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 67
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60214320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)