Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20174
         (622 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64842-8|AAB37085.1|  173|Caenorhabditis elegans Hypothetical pr...    29   2.0  
U88169-11|AAB42238.2|  308|Caenorhabditis elegans C-type lectin ...    29   2.7  
AL034543-2|CAA22515.1| 1696|Caenorhabditis elegans Hypothetical ...    29   2.7  
AL132895-2|CAC14404.1|  613|Caenorhabditis elegans Hypothetical ...    29   3.5  
U58752-6|AAB00668.1|  308|Caenorhabditis elegans C-type lectin p...    28   4.7  
AF099002-3|AAO91691.1|  570|Caenorhabditis elegans Hypothetical ...    28   4.7  
AF099002-2|AAC68740.2|  556|Caenorhabditis elegans Hypothetical ...    28   4.7  
AF099002-1|AAK68587.1|  559|Caenorhabditis elegans Hypothetical ...    28   4.7  
Z49132-11|CAA88991.1|  400|Caenorhabditis elegans Hypothetical p...    28   6.2  
Z48585-11|CAA88487.1|  400|Caenorhabditis elegans Hypothetical p...    28   6.2  
U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of pr...    28   6.2  
U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion...    28   6.2  
U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion...    28   6.2  

>U64842-8|AAB37085.1|  173|Caenorhabditis elegans Hypothetical
           protein F25B4.9 protein.
          Length = 173

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 17/58 (29%), Positives = 30/58 (51%)
 Frame = +2

Query: 101 SDYVYNKDTNAFYKLHTDSAKIWDAKSSCTTEGAQLMVPASEQDIIQLHSMSRDFQIW 274
           S++ Y   TN+ YKL  ++     A+  C  +GA  +   S ++   +H +SR  +IW
Sbjct: 26  SNWRYFPQTNSCYKLIDENLPWTIAEFKCLFQGAHHVSIDSPEENQFVHELSRWSEIW 83


>U88169-11|AAB42238.2|  308|Caenorhabditis elegans C-type lectin
           protein 53 protein.
          Length = 308

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
 Frame = +2

Query: 26  KSAFICFCFLAIA-SAPPPSVSKQYRSDYVYNKDTNAFYKLHTDSAKIWDAKSSCTTEGA 202
           K  FIC     +  + P  ++     S Y + + T+  YK         DA+S+C  +G 
Sbjct: 142 KLPFICSAAATVVPTCPTITIPSHCPSGYTWFETTDFCYKTTVQFTNFNDARSACQADGG 201

Query: 203 QL 208
            L
Sbjct: 202 DL 203


>AL034543-2|CAA22515.1| 1696|Caenorhabditis elegans Hypothetical
           protein Y81G3A.3 protein.
          Length = 1696

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 16/65 (24%), Positives = 32/65 (49%)
 Frame = +2

Query: 140 KLHTDSAKIWDAKSSCTTEGAQLMVPASEQDIIQLHSMSRDFQIWGTMFGWMKTEKTMNL 319
           KL T  + + D ++     G   ++P + + +++ HS+  D + W T FG  +  K  + 
Sbjct: 591 KLKTGKS-LEDKENKANLGGGDSLMPMNLRGLVKDHSIGVDAKEWSTPFGKPEGPKCASR 649

Query: 320 QRNSR 334
            R S+
Sbjct: 650 MRQSK 654


>AL132895-2|CAC14404.1|  613|Caenorhabditis elegans Hypothetical
           protein Y59A8A.2 protein.
          Length = 613

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 11/40 (27%), Positives = 22/40 (55%)
 Frame = +1

Query: 259 RFPDLGNYVWVDEDGKNHESAEEQPMIDLSDSVTEAMRSR 378
           R P   N+ W+  +      +E++ + + S+S T ++RSR
Sbjct: 562 RLPKRNNFGWICHECNESSDSEQEIIPEASESTTRSVRSR 601


>U58752-6|AAB00668.1|  308|Caenorhabditis elegans C-type lectin
           protein 51 protein.
          Length = 308

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
 Frame = +2

Query: 35  FICFCFLAIA-SAPPPSVSKQYRSDYVYNKDTNAFYKLHTDSAKIWDAKSSCTTEGAQL 208
           FIC    ++  + P  ++     S Y +  +T+  YK         DA+SSC  +G  L
Sbjct: 145 FICSYSSSVTPTCPSVTIPSHCPSGYTWYDETDFCYKNTVRFTSFNDARSSCQADGGDL 203


>AF099002-3|AAO91691.1|  570|Caenorhabditis elegans Hypothetical
           protein Y71H10B.1c protein.
          Length = 570

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = +1

Query: 292 DEDGKNHESAEEQPMIDLSDSVTEAMRSRFALQGCDVVTRQGEIETSP 435
           D++   HE  E++   + S S  EA +      G D  +  G+I T P
Sbjct: 506 DQETFCHEEEEDEDQTNSSSSDGEATKRERTKSGSDASSNAGDISTEP 553


>AF099002-2|AAC68740.2|  556|Caenorhabditis elegans Hypothetical
           protein Y71H10B.1a protein.
          Length = 556

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = +1

Query: 292 DEDGKNHESAEEQPMIDLSDSVTEAMRSRFALQGCDVVTRQGEIETSP 435
           D++   HE  E++   + S S  EA +      G D  +  G+I T P
Sbjct: 492 DQETFCHEEEEDEDQTNSSSSDGEATKRERTKSGSDASSNAGDISTEP 539


>AF099002-1|AAK68587.1|  559|Caenorhabditis elegans Hypothetical
           protein Y71H10B.1b protein.
          Length = 559

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = +1

Query: 292 DEDGKNHESAEEQPMIDLSDSVTEAMRSRFALQGCDVVTRQGEIETSP 435
           D++   HE  E++   + S S  EA +      G D  +  G+I T P
Sbjct: 495 DQETFCHEEEEDEDQTNSSSSDGEATKRERTKSGSDASSNAGDISTEP 542


>Z49132-11|CAA88991.1|  400|Caenorhabditis elegans Hypothetical
           protein ZK673.9 protein.
          Length = 400

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +2

Query: 434 PATTDYLFICKVEAIDAPYDT 496
           P T D+LFIC+V+A    Y T
Sbjct: 375 PQTNDWLFICQVQASSTEYYT 395


>Z48585-11|CAA88487.1|  400|Caenorhabditis elegans Hypothetical
           protein ZK673.9 protein.
          Length = 400

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +2

Query: 434 PATTDYLFICKVEAIDAPYDT 496
           P T D+LFIC+V+A    Y T
Sbjct: 375 PQTNDWLFICQVQASSTEYYT 395


>U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of
            presynaptic activity protein.
          Length = 1409

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -3

Query: 275  PRSGNLLTSNEAELYPVLKPAPSTGLP 195
            P S + L   + +  P+LKPAP T LP
Sbjct: 1027 PSSPSFLADADEQTKPLLKPAPPTTLP 1053


>U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion
            defective protein3, isoform b protein.
          Length = 1408

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -3

Query: 275  PRSGNLLTSNEAELYPVLKPAPSTGLP 195
            P S + L   + +  P+LKPAP T LP
Sbjct: 1027 PSSPSFLADADEQTKPLLKPAPPTTLP 1053


>U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion
            defective protein3, isoform a protein.
          Length = 1409

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -3

Query: 275  PRSGNLLTSNEAELYPVLKPAPSTGLP 195
            P S + L   + +  P+LKPAP T LP
Sbjct: 1027 PSSPSFLADADEQTKPLLKPAPPTTLP 1053


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,841,550
Number of Sequences: 27780
Number of extensions: 316099
Number of successful extensions: 890
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 890
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)