Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20170
         (515 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   6.5  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   6.5  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   6.5  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   6.5  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   8.6  

>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +2

Query: 260 SRNTMEYCYKL 292
           SR T E CYKL
Sbjct: 239 SRKTAEMCYKL 249


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 12/45 (26%), Positives = 17/45 (37%)
 Frame = +2

Query: 335 YNFRLIMAGNFAKLIYRNYNLALKLGPTLDPANERLAYGDGKEKN 469
           Y   L        L +  YNL+L +    D  N      + +EKN
Sbjct: 169 YTLHLFCVLYVVLLHFLTYNLSLGIKLRYDDVNNLFRIEESEEKN 213


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 12/45 (26%), Positives = 17/45 (37%)
 Frame = +2

Query: 335 YNFRLIMAGNFAKLIYRNYNLALKLGPTLDPANERLAYGDGKEKN 469
           Y   L        L +  YNL+L +    D  N      + +EKN
Sbjct: 169 YTLHLFCVLYVVLLHFLTYNLSLGIKLRYDDVNNLFRIEESEEKN 213


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -1

Query: 302 CRPXACSSTPWCSD 261
           CRP AC +   C D
Sbjct: 264 CRPGACHNNGTCLD 277


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -3

Query: 327 YFLAMCCPLPTXSL*QYSMVFRLP 256
           Y   +  PL    L  Y+M FR+P
Sbjct: 323 YDSTITAPLSNPPLWPYTMYFRMP 346


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,477
Number of Sequences: 336
Number of extensions: 2139
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)