Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20170
(515 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF202777-1|AAF86370.1| 631|Homo sapiens ancient conserved domai... 30 4.2
BC116178-1|AAI16179.1| 950|Homo sapiens coiled-coil domain cont... 29 9.7
BC110842-1|AAI10843.1| 950|Homo sapiens coiled-coil domain cont... 29 9.7
BC086876-1|AAH86876.1| 553|Homo sapiens CCDC80 protein protein. 29 9.7
AY548107-1|AAS66644.1| 950|Homo sapiens DRO1 protein. 29 9.7
AY548106-1|AAS66643.1| 950|Homo sapiens DRO1 protein. 29 9.7
AY526612-1|AAS92235.1| 950|Homo sapiens URB protein. 29 9.7
AY333429-1|AAQ96742.1| 950|Homo sapiens URB protein. 29 9.7
AK075210-1|BAC11475.1| 594|Homo sapiens protein ( Homo sapiens ... 29 9.7
AB266387-1|BAF48770.1| 950|Homo sapiens nuclear envelope protei... 29 9.7
AB052098-1|BAD05134.1| 950|Homo sapiens HBE245 protein. 29 9.7
>AF202777-1|AAF86370.1| 631|Homo sapiens ancient conserved domain
protein 4 protein.
Length = 631
Score = 30.3 bits (65), Expect = 4.2
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -2
Query: 346 SKVIGEVLSGNVLSVADPQLVAVLHGVPTSVMIRLLTTFWMMEPLPW-FSYSKL 188
S IG V+ G +L PQ + HG+ I LLT F+M+ P F SKL
Sbjct: 130 SSTIGIVIFGEIL----PQALCSRHGLAVGANIILLTKFFMLLTFPLSFPISKL 179
>BC116178-1|AAI16179.1| 950|Homo sapiens coiled-coil domain
containing 80 protein.
Length = 950
Score = 29.1 bits (62), Expect = 9.7
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 70 PXAPASLKCPR*A*AVLTKNSRRNCTTASSPVTTTAL--SVRAWNTRTKARAPSS 228
P P + P +T+++ R T A+ P+TTTA + R W R P++
Sbjct: 345 PSTPRATTLPPAPATTVTRSTSRAVTVAARPMTTTAFPTTQRPWTPSPSHRPPTT 399
>BC110842-1|AAI10843.1| 950|Homo sapiens coiled-coil domain
containing 80 protein.
Length = 950
Score = 29.1 bits (62), Expect = 9.7
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 70 PXAPASLKCPR*A*AVLTKNSRRNCTTASSPVTTTAL--SVRAWNTRTKARAPSS 228
P P + P +T+++ R T A+ P+TTTA + R W R P++
Sbjct: 345 PSTPRATTLPPAPATTVTRSTSRAVTVAARPMTTTAFPTTQRPWTPSPSHRPPTT 399
>BC086876-1|AAH86876.1| 553|Homo sapiens CCDC80 protein protein.
Length = 553
Score = 29.1 bits (62), Expect = 9.7
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 70 PXAPASLKCPR*A*AVLTKNSRRNCTTASSPVTTTAL--SVRAWNTRTKARAPSS 228
P P + P +T+++ R T A+ P+TTTA + R W R P++
Sbjct: 345 PSTPRATTLPPAPATTVTRSTSRAVTVAARPMTTTAFPTTQRPWTPSPSHRPPTT 399
>AY548107-1|AAS66644.1| 950|Homo sapiens DRO1 protein.
Length = 950
Score = 29.1 bits (62), Expect = 9.7
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 70 PXAPASLKCPR*A*AVLTKNSRRNCTTASSPVTTTAL--SVRAWNTRTKARAPSS 228
P P + P +T+++ R T A+ P+TTTA + R W R P++
Sbjct: 345 PSTPRATTLPPAPATTVTRSTSRAVTVAARPMTTTAFPTTQRPWTPSPSHRPPTT 399
>AY548106-1|AAS66643.1| 950|Homo sapiens DRO1 protein.
Length = 950
Score = 29.1 bits (62), Expect = 9.7
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 70 PXAPASLKCPR*A*AVLTKNSRRNCTTASSPVTTTAL--SVRAWNTRTKARAPSS 228
P P + P +T+++ R T A+ P+TTTA + R W R P++
Sbjct: 345 PSTPRATTLPPAPATTVTRSTSRAVTVAARPMTTTAFPTTQRPWTPSPSHRPPTT 399
>AY526612-1|AAS92235.1| 950|Homo sapiens URB protein.
Length = 950
Score = 29.1 bits (62), Expect = 9.7
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 70 PXAPASLKCPR*A*AVLTKNSRRNCTTASSPVTTTAL--SVRAWNTRTKARAPSS 228
P P + P +T+++ R T A+ P+TTTA + R W R P++
Sbjct: 345 PSTPRATTLPPAPATTVTRSTSRAVTVAARPMTTTAFPTTQRPWTPSPSHRPPTT 399
>AY333429-1|AAQ96742.1| 950|Homo sapiens URB protein.
Length = 950
Score = 29.1 bits (62), Expect = 9.7
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 70 PXAPASLKCPR*A*AVLTKNSRRNCTTASSPVTTTAL--SVRAWNTRTKARAPSS 228
P P + P +T+++ R T A+ P+TTTA + R W R P++
Sbjct: 345 PSTPRATTLPPAPATTVTRSTSRAVTVAARPMTTTAFPTTQRPWTPSPSHRPPTT 399
>AK075210-1|BAC11475.1| 594|Homo sapiens protein ( Homo sapiens
cDNA FLJ90729 fis, clone PLACE1009982, weakly similar to
SALIVARY GLUE PROTEIN SGS-3 PRECURSOR. ).
Length = 594
Score = 29.1 bits (62), Expect = 9.7
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 70 PXAPASLKCPR*A*AVLTKNSRRNCTTASSPVTTTAL--SVRAWNTRTKARAPSS 228
P P + P +T+++ R T A+ P+TTTA + R W R P++
Sbjct: 356 PSTPRATTLPPAPATTVTRSTSRAVTVAARPMTTTAFPTTQRPWTPSPSHRPPTT 410
>AB266387-1|BAF48770.1| 950|Homo sapiens nuclear envelope protein
okuribin protein.
Length = 950
Score = 29.1 bits (62), Expect = 9.7
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 70 PXAPASLKCPR*A*AVLTKNSRRNCTTASSPVTTTAL--SVRAWNTRTKARAPSS 228
P P + P +T+++ R T A+ P+TTTA + R W R P++
Sbjct: 345 PSTPRATTLPPAPATTVTRSTSRAVTVAARPMTTTAFPTTQRPWTPSPSHRPPTT 399
>AB052098-1|BAD05134.1| 950|Homo sapiens HBE245 protein.
Length = 950
Score = 29.1 bits (62), Expect = 9.7
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 70 PXAPASLKCPR*A*AVLTKNSRRNCTTASSPVTTTAL--SVRAWNTRTKARAPSS 228
P P + P +T+++ R T A+ P+TTTA + R W R P++
Sbjct: 345 PSTPRATTLPPAPATTVTRSTSRAVTVAARPMTTTAFPTTQRPWTPSPSHRPPTT 399
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,851,530
Number of Sequences: 237096
Number of extensions: 1353820
Number of successful extensions: 2677
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2674
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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