Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20170
(515 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g18700.1 68415.m02178 glycosyl transferase family 20 protein ... 32 0.26
At4g13310.2 68417.m02080 cytochrome P450 71A20, putative (CYP71A... 29 2.5
At4g13310.1 68417.m02081 cytochrome P450 71A20, putative (CYP71A... 29 2.5
At5g59210.2 68418.m07421 myosin heavy chain-related contains wea... 28 4.3
At5g59210.1 68418.m07420 myosin heavy chain-related contains wea... 28 4.3
At5g07400.1 68418.m00847 forkhead-associated domain-containing p... 27 7.5
At5g16270.1 68418.m01900 Rad21/Rec8-like family protein weak sim... 27 9.9
At3g13320.1 68416.m01677 calcium exchanger (CAX2) almost identic... 27 9.9
>At2g18700.1 68415.m02178 glycosyl transferase family 20 protein /
trehalose-phosphatase family protein similar to
trehalose-6-phosphate synthase SL-TPS/P [Selaginella
lepidophylla] GI:4100325; contains Pfam profiles
PF00982: Glycosyltransferase family 20, PF02358:
Trehalose-phosphatase
Length = 862
Score = 31.9 bits (69), Expect = 0.26
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = -1
Query: 284 SSTPWCSDFRNDQVVNYILDDGALALVLVFQALTDSAVVVTGEDAVVQFLLEFF 123
SS WC +F ND + + D +V+ ++ V+ + ++ V QFLLE F
Sbjct: 68 SSNKWCFEFDNDSLYLQLKDGFPPETEVVYVGSLNADVLPSEQEDVSQFLLEKF 121
>At4g13310.2 68417.m02080 cytochrome P450 71A20, putative (CYP71A20)
Identical to Cytochrome P450 (SP:Q9T0K2) [Arabidopsis
thaliana]; similar to cytochrome P450 71A4, Solanum
melongena, PIR2:S36805
Length = 390
Score = 28.7 bits (61), Expect = 2.5
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 138 KLYNSILTGDYDSAVRQSLEYENQGKGSIIQNVVNNLII 254
K+ + IL+G D A EY Q K IQN++NN ++
Sbjct: 103 KVVDKILSGGRDVAFAPYGEYWRQMKSICIQNLLNNKMV 141
>At4g13310.1 68417.m02081 cytochrome P450 71A20, putative (CYP71A20)
Identical to Cytochrome P450 (SP:Q9T0K2) [Arabidopsis
thaliana]; similar to cytochrome P450 71A4, Solanum
melongena, PIR2:S36805
Length = 497
Score = 28.7 bits (61), Expect = 2.5
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 138 KLYNSILTGDYDSAVRQSLEYENQGKGSIIQNVVNNLII 254
K+ + IL+G D A EY Q K IQN++NN ++
Sbjct: 103 KVVDKILSGGRDVAFAPYGEYWRQMKSICIQNLLNNKMV 141
>At5g59210.2 68418.m07421 myosin heavy chain-related contains weak
similarity to Myosin heavy chain, gizzard smooth muscle
(Swiss-Prot:P10587) [Gallus gallus]
Length = 433
Score = 27.9 bits (59), Expect = 4.3
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +3
Query: 135 EKLY--NSILTGDYDSAVRQSLEYENQGKGSIIQNVVNNLIITEVGT 269
EKL+ NS L+ Y ++ S ++ENQ K + QNV ++ ++ T
Sbjct: 298 EKLFEENSNLSASYQESINISNQWENQVKECLKQNVELREVLDKLRT 344
>At5g59210.1 68418.m07420 myosin heavy chain-related contains weak
similarity to Myosin heavy chain, gizzard smooth muscle
(Swiss-Prot:P10587) [Gallus gallus]
Length = 434
Score = 27.9 bits (59), Expect = 4.3
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +3
Query: 135 EKLY--NSILTGDYDSAVRQSLEYENQGKGSIIQNVVNNLIITEVGT 269
EKL+ NS L+ Y ++ S ++ENQ K + QNV ++ ++ T
Sbjct: 299 EKLFEENSNLSASYQESINISNQWENQVKECLKQNVELREVLDKLRT 345
>At5g07400.1 68418.m00847 forkhead-associated domain-containing
protein / FHA domain-containing protein
Length = 1084
Score = 27.1 bits (57), Expect = 7.5
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 193 WNTRTKARAPSSRM*LTT*SLRKSEHHGVL 282
W+ R + APS ++ T K+ HHGVL
Sbjct: 835 WSNREEREAPSIKIIFPTIERVKNGHHGVL 864
>At5g16270.1 68418.m01900 Rad21/Rec8-like family protein weak
similarity to cohesion family protein SYN2 [Arabidopsis
thaliana] GI:12006360; contains Pfam profiles PF04824:
Conserved region of Rad21 / Rec8 like protein, PF04825:
N terminus of Rad21 / Rec8 like protein; supporting cDNA
gi|18157648|gb|AF400129.1|AF400129
Length = 1031
Score = 26.6 bits (56), Expect = 9.9
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -1
Query: 242 VNYILDDGALALVLVFQALTDSAVVVTGEDAVVQF 138
VNY+ DD + AL+ V QA +AV + E++ +
Sbjct: 71 VNYLFDDCSEALLKVKQAFRSAAVDLPPEESTAPY 105
>At3g13320.1 68416.m01677 calcium exchanger (CAX2) almost identical
to low affinity calcium antiporter CAX2 (GI:1488267)
[Arabidopsis thaliana]; Ca2+:Cation Antiporter (CaCA)
Family member PMID:11500563
Length = 441
Score = 26.6 bits (56), Expect = 9.9
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -2
Query: 496 MNFQLMEVAVLFLTIAV 446
+NFQL E A+LF+T+ V
Sbjct: 385 LNFQLFETAMLFITVIV 401
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,343,663
Number of Sequences: 28952
Number of extensions: 192494
Number of successful extensions: 502
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 502
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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