Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20168
(497 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 132 3e-32
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 124 6e-30
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 111 6e-26
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 107 9e-25
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 76 3e-15
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 51 8e-08
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 42 7e-05
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 30 0.22
SPAC25B8.04c |||mitochondrial splicing suppressor |Schizosacchar... 29 0.51
SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharo... 26 2.7
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 26 3.6
SPAC823.11 |||sphingosine-1-phosphate phosphatase |Schizosacchar... 25 4.8
SPBC776.10c |cog6||Golgi transport complex peripheral subunit Co... 25 4.8
SPAC17G8.02 |||uridine ribohydrolase |Schizosaccharomyces pombe|... 25 6.3
SPCC553.06 |||oligosaccharyltransferase subunit|Schizosaccharomy... 25 6.3
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 25 6.3
SPAC1A6.01c ||SPAC23C4.20c|human thyroid receptor interacting pr... 25 8.4
SPBC119.07 |ppk19||serine/threonine protein kinase Ppk19|Schizos... 25 8.4
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 132 bits (319), Expect = 3e-32
Identities = 60/83 (72%), Positives = 70/83 (84%)
Frame = +3
Query: 249 PQNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 428
P NTIFDAKRLIGRKF+D VQ+DMKHWPF+V+S GKP ++V YKGE KTF PEE+SSM
Sbjct: 61 PHNTIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEISSM 120
Query: 429 VLTKMKETAEAYLGKTVQNAVIT 497
VL KM+ETAEAYLG V +AV+T
Sbjct: 121 VLMKMRETAEAYLGGKVTDAVVT 143
Score = 112 bits (269), Expect = 3e-26
Identities = 51/58 (87%), Positives = 55/58 (94%)
Frame = +1
Query: 79 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 252
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 61
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 124 bits (300), Expect = 6e-30
Identities = 56/83 (67%), Positives = 68/83 (81%)
Frame = +3
Query: 249 PQNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 428
P NTIFDAKRLIGR+F D VQ+DMKHWPF+V+ GKP I+V +KGE KTF PEE+SSM
Sbjct: 61 PHNTIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEISSM 120
Query: 429 VLTKMKETAEAYLGKTVQNAVIT 497
VL KM+E+AEA+LG V +AV+T
Sbjct: 121 VLLKMRESAEAFLGGKVTDAVVT 143
Score = 112 bits (269), Expect = 3e-26
Identities = 51/58 (87%), Positives = 55/58 (94%)
Frame = +1
Query: 79 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 252
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 61
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 111 bits (267), Expect = 6e-26
Identities = 50/83 (60%), Positives = 64/83 (77%)
Frame = +3
Query: 249 PQNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 428
P+NT+FDAKRLIGR++ED Q D+KHWPF+V+ + G P I+V Y GE K F +E+S+M
Sbjct: 65 PRNTVFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGIPTIEVNYLGEKKQFTAQEISAM 124
Query: 429 VLTKMKETAEAYLGKTVQNAVIT 497
VLTKMKE +EA L K V+ AVIT
Sbjct: 125 VLTKMKEISEAKLNKRVEKAVIT 147
Score = 101 bits (241), Expect = 8e-23
Identities = 45/59 (76%), Positives = 52/59 (88%)
Frame = +1
Query: 79 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPK 255
A+GIDLGTTYSCV V++ VEII NDQG RTTPS+VAFT+TERL+GDAAKNQ AMNP+
Sbjct: 8 AIGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNPR 66
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 107 bits (257), Expect = 9e-25
Identities = 47/83 (56%), Positives = 66/83 (79%)
Frame = +3
Query: 249 PQNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 428
P+NTIFD KRLIGRKF++ T+ D+K +PF +V+D +P ++V G+ K F PEE+S+M
Sbjct: 94 PENTIFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISAM 153
Query: 429 VLTKMKETAEAYLGKTVQNAVIT 497
+L+KMK+TAEAYLGK V +AV+T
Sbjct: 154 ILSKMKQTAEAYLGKPVTHAVVT 176
Score = 98.7 bits (235), Expect = 4e-22
Identities = 43/58 (74%), Positives = 51/58 (87%)
Frame = +1
Query: 82 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPK 255
+GIDLGTTYSCV V ++G+VEIIANDQGNR TPSYVAFT+ ERL+G+AAKNQ NP+
Sbjct: 38 IGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNPE 95
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 76.2 bits (179), Expect = 3e-15
Identities = 35/83 (42%), Positives = 52/83 (62%)
Frame = +3
Query: 249 PQNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 428
P+NT F KRLIGR+F++ VQ D+K P+++V + KT+ P ++
Sbjct: 110 PENTFFATKRLIGRRFKEPEVQRDIKEVPYKIVEHSNGD---AWLEARGKTYSPSQIGGF 166
Query: 429 VLTKMKETAEAYLGKTVQNAVIT 497
+L+KM+ETA YLGK V+NAV+T
Sbjct: 167 ILSKMRETASTYLGKDVKNAVVT 189
Score = 74.1 bits (174), Expect = 1e-14
Identities = 34/66 (51%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Frame = +1
Query: 70 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 246
K P +GIDLGTT SC+ + + ++IAN +G RTTPS VAFT D ERL+G +AK Q +
Sbjct: 49 KGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVI 108
Query: 247 NPKTQY 264
NP+ +
Sbjct: 109 NPENTF 114
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 51.2 bits (117), Expect = 8e-08
Identities = 21/61 (34%), Positives = 39/61 (63%)
Frame = +1
Query: 67 AKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 246
++ VGID G + + + V ++ +++I N+ NR+TPS V++ + R +G+AAK+ A
Sbjct: 3 SRTNVVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEAS 62
Query: 247 N 249
N
Sbjct: 63 N 63
Score = 36.7 bits (81), Expect = 0.002
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = +3
Query: 252 QNTIFDAKRLIGRKFEDATVQ-ADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 428
+NT+ KRL GR ++D ++ + ++ G KV Y E+ F ++ +
Sbjct: 65 RNTVGSLKRLAGRTYDDPEIKDIESNFISAKLTEVDGFVGAKVQYLNEETAFSNIQLIAA 124
Query: 429 VLTKMKETAEAYLGKTVQNAVIT 497
TK+K AEA L +V + VI+
Sbjct: 125 YFTKIKAIAEAELIGSVSDVVIS 147
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 41.5 bits (93), Expect = 7e-05
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = +1
Query: 82 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 249
+GI G S + + GK +++AN++GNR PS +++ + G A+ Q+ N
Sbjct: 27 IGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQLVRN 82
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 29.9 bits (64), Expect = 0.22
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +1
Query: 82 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPKT 258
+ ID GT ++ + + G +EI+ R S VAF ER+ G A N P
Sbjct: 25 LAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAFKGNERIFGVDASNLATRFP-- 82
Query: 259 QYSMPNV 279
+S+ NV
Sbjct: 83 AHSIRNV 89
>SPAC25B8.04c |||mitochondrial splicing suppressor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 378
Score = 28.7 bits (61), Expect = 0.51
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 74 HPQ*ESIWVPRTLALVSSSTGRWRSSPTTRAT 169
HP S W+P LVS+ W +SP+++ T
Sbjct: 283 HPLYSSSWIPTLHDLVSTRCSVWLTSPSSQRT 314
>SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2244
Score = 26.2 bits (55), Expect = 2.7
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +1
Query: 178 PSYVAFTDTERLIGDAAKNQVAMNPKTQYSMPNVSSDVSSKMLLC 312
P +A T ER++ AAK A+N Y++ ++ D K++ C
Sbjct: 1252 PQDLAPTTIERIVDAAAKIGEALNITGPYNIQFIAKDNEIKVIEC 1296
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.8 bits (54), Expect = 3.6
Identities = 20/95 (21%), Positives = 44/95 (46%), Gaps = 11/95 (11%)
Frame = -2
Query: 493 ITAFCTVLPR*ASAVSFIFVSTMELTSSGKKVLSSPL-----------YATLILGLPPSL 347
I++ T+L + S + +S+ + S +LSS + Y++ ++ +L
Sbjct: 618 ISSSSTILSSPTPSTSSLMISSSSIISGSSSILSSSISTIPISSSLSTYSSSVIPSSSTL 677
Query: 346 TTSKGQCFMSACTVASSNLRPMRRLASNIVFWGSS 242
+S +S+ VASS+ P+ +S + + +S
Sbjct: 678 VSSSSSLIVSSSPVASSSSSPIPSSSSLVSTYSAS 712
>SPAC823.11 |||sphingosine-1-phosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 411
Score = 25.4 bits (53), Expect = 4.8
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -2
Query: 160 GRWR*SPPSRAGRHQRKSTWYPDRFLLRVLLPFCI 56
G W SP S + H ++++ +F +RVL C+
Sbjct: 276 GTWFASPESLSHLHDNLNSYFLLKFFVRVLFGVCM 310
>SPBC776.10c |cog6||Golgi transport complex peripheral subunit Cog6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 675
Score = 25.4 bits (53), Expect = 4.8
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 223 AAKNQVAMNPKTQYSMPNVSSDVSSKML 306
A K Q+ +NP + +PNV D + +L
Sbjct: 323 ARKRQIQLNPFPPWDVPNVLEDQMNSLL 350
>SPAC17G8.02 |||uridine ribohydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 330
Score = 25.0 bits (52), Expect = 6.3
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -1
Query: 389 TLICYLDLRFASITDNLERPVLHVGLHSSIFELTSDETFGI 267
T I L + S+TDN+ER + +G + I +TS F +
Sbjct: 142 TNIALLLATYPSVTDNIER-FIFMGGSTGIGNITSQAEFNV 181
>SPCC553.06 |||oligosaccharyltransferase subunit|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 271
Score = 25.0 bits (52), Expect = 6.3
Identities = 9/20 (45%), Positives = 16/20 (80%), Gaps = 1/20 (5%)
Frame = -1
Query: 308 SSIFELTSDETFGIEY-CVL 252
S+++ELT DET +++ C+L
Sbjct: 51 STVYELTGDETLNLKFTCIL 70
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 25.0 bits (52), Expect = 6.3
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +3
Query: 60 QNGKSTRSRNRSGYHVLLRWCLPARE 137
+NGK T +R +S + W P++E
Sbjct: 477 RNGKKTPTRTKSRMQQFINWFKPSKE 502
>SPAC1A6.01c ||SPAC23C4.20c|human thyroid receptor interacting
protein homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 455
Score = 24.6 bits (51), Expect = 8.4
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 359 ASITDNLERPVLHVGLHSS 303
A + NL RP+ H LHSS
Sbjct: 408 APVIRNLPRPIYHQDLHSS 426
>SPBC119.07 |ppk19||serine/threonine protein kinase
Ppk19|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1706
Score = 24.6 bits (51), Expect = 8.4
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 85 GIDLGTTYSCVGVFQHGKVEIIANDQGNR 171
G LG TY+ V Q G VE+ D N+
Sbjct: 1279 GCFLGNTYAFASVTQDGSVEVHRLDVNNQ 1307
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,247,980
Number of Sequences: 5004
Number of extensions: 48927
Number of successful extensions: 168
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 166
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 196153982
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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