Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20168
(497 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g16030.1 68414.m01924 heat shock protein 70, putative / HSP70... 127 5e-30
At5g02500.1 68418.m00183 heat shock cognate 70 kDa protein 1 (HS... 120 5e-28
At5g02490.1 68418.m00182 heat shock cognate 70 kDa protein 2 (HS... 120 5e-28
At3g12580.1 68416.m01567 heat shock protein 70, putative / HSP70... 120 5e-28
At3g09440.1 68416.m01121 heat shock cognate 70 kDa protein 3 (HS... 120 5e-28
At1g56410.1 68414.m06487 heat shock cognate 70 kDa protein, puta... 120 5e-28
At1g09080.1 68414.m01013 luminal binding protein 3 (BiP-3) (BP3)... 116 1e-26
At5g42020.2 68418.m05116 luminal binding protein 2 (BiP-2) (BP2)... 111 3e-25
At5g42020.1 68418.m05115 luminal binding protein 2 (BiP-2) (BP2)... 111 3e-25
At5g28540.1 68418.m03480 luminal binding protein 1 (BiP-1) (BP1)... 111 3e-25
At4g37910.1 68417.m05361 heat shock protein 70, mitochondrial, p... 80 7e-16
At5g09590.1 68418.m01110 heat shock protein 70 / HSP70 (HSC70-5)... 76 1e-14
At5g49910.1 68418.m06180 heat shock protein 70 / HSP70 (HSC70-7)... 66 1e-11
At4g24280.1 68417.m03486 heat shock protein 70, putative / HSP70... 66 1e-11
At1g11660.1 68414.m01339 heat shock protein, putative strong sim... 66 1e-11
At1g79930.1 68414.m09340 heat shock protein, putative contains P... 63 1e-10
At1g79920.2 68414.m09339 heat shock protein 70, putative / HSP70... 62 2e-10
At1g79920.1 68414.m09338 heat shock protein 70, putative / HSP70... 62 2e-10
At2g32120.2 68415.m03926 heat shock protein 70 family protein / ... 46 1e-05
At2g32120.1 68415.m03925 heat shock protein 70 family protein / ... 46 1e-05
At4g16660.1 68417.m02517 heat shock protein 70, putative / HSP70... 36 0.011
At4g24910.1 68417.m03566 hypothetical protein contains Pfam prof... 29 1.3
At5g62550.1 68418.m07850 expressed protein 29 1.7
At4g18375.2 68417.m02727 KH domain-containing protein contains s... 29 1.7
At4g18375.1 68417.m02726 KH domain-containing protein contains s... 29 1.7
At2g27350.5 68415.m03295 OTU-like cysteine protease family prote... 29 2.3
At2g27350.4 68415.m03294 OTU-like cysteine protease family prote... 29 2.3
At2g27350.3 68415.m03293 OTU-like cysteine protease family prote... 29 2.3
At2g27350.2 68415.m03292 OTU-like cysteine protease family prote... 29 2.3
At2g27350.1 68415.m03291 OTU-like cysteine protease family prote... 29 2.3
At4g27630.2 68417.m03972 expressed protein 27 5.3
At1g68330.1 68414.m07805 expressed protein 27 5.3
At4g34940.1 68417.m04953 armadillo/beta-catenin repeat family pr... 27 7.0
At3g25790.1 68416.m03210 myb family transcription factor contain... 27 7.0
At1g16800.1 68414.m02018 tRNA-splicing endonuclease positive eff... 27 7.0
At3g29786.1 68416.m03775 hypothetical protein 27 9.3
At2g31960.1 68415.m03905 glycosyl transferase family 48 protein ... 27 9.3
At2g15590.2 68415.m01786 expressed protein 27 9.3
At1g05570.1 68414.m00575 callose synthase 1 (CALS1) / 1,3-beta-g... 27 9.3
>At1g16030.1 68414.m01924 heat shock protein 70, putative / HSP70,
putative similar to heat shock protein hsp70 GI:1771478
from [Pisum sativum]
Length = 646
Score = 127 bits (306), Expect = 5e-30
Identities = 59/84 (70%), Positives = 71/84 (84%), Gaps = 1/84 (1%)
Frame = +3
Query: 249 PQNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGG-KPKIKVAYKGEDKTFFPEEVSS 425
PQNT+FDAKRLIGRKF D +VQ+D+ HWPF+VVS G KP I V+YK E+K F PEE+SS
Sbjct: 65 PQNTVFDAKRLIGRKFSDPSVQSDILHWPFKVVSGPGEKPMIVVSYKNEEKQFSPEEISS 124
Query: 426 MVLTKMKETAEAYLGKTVQNAVIT 497
MVL KMKE AEA+LG+TV+NAV+T
Sbjct: 125 MVLVKMKEVAEAFLGRTVKNAVVT 148
Score = 111 bits (266), Expect = 3e-25
Identities = 50/59 (84%), Positives = 56/59 (94%)
Frame = +1
Query: 79 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPK 255
A+GIDLGTTYSCVGV+ + +VEII NDQGNRTTPSYVAFTDTERLIGDAAKNQVA+NP+
Sbjct: 8 AIGIDLGTTYSCVGVWMNDRVEIIPNDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQ 66
>At5g02500.1 68418.m00183 heat shock cognate 70 kDa protein 1
(HSC70-1) (HSP70-1) identical to SP|P22953 Heat shock
cognate 70 kDa protein 1 (Hsc70.1) {Arabidopsis
thaliana}
Length = 651
Score = 120 bits (289), Expect = 5e-28
Identities = 54/61 (88%), Positives = 59/61 (96%)
Frame = +1
Query: 70 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 249
+ PA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMN
Sbjct: 6 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMN 65
Query: 250 P 252
P
Sbjct: 66 P 66
Score = 114 bits (274), Expect = 4e-26
Identities = 53/84 (63%), Positives = 66/84 (78%), Gaps = 1/84 (1%)
Frame = +3
Query: 249 PQNTIFDAKRLIGRKFEDATVQADMKHWPFEV-VSDGGKPKIKVAYKGEDKTFFPEEVSS 425
P NT+FDAKRLIGR+F D++VQ+DMK WPF++ KP I V YKGE+K F EE+SS
Sbjct: 66 PVNTVFDAKRLIGRRFSDSSVQSDMKLWPFKIQAGPADKPMIYVEYKGEEKEFAAEEISS 125
Query: 426 MVLTKMKETAEAYLGKTVQNAVIT 497
MVL KM+E AEAYLG T++NAV+T
Sbjct: 126 MVLIKMREIAEAYLGVTIKNAVVT 149
>At5g02490.1 68418.m00182 heat shock cognate 70 kDa protein 2
(HSC70-2) (HSP70-2) identical to SP|P22954 Heat shock
cognate 70 kDa protein 2 (Hsc70.2) {Arabidopsis
thaliana}
Length = 653
Score = 120 bits (289), Expect = 5e-28
Identities = 54/61 (88%), Positives = 59/61 (96%)
Frame = +1
Query: 70 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 249
+ PA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMN
Sbjct: 6 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMN 65
Query: 250 P 252
P
Sbjct: 66 P 66
Score = 112 bits (269), Expect = 1e-25
Identities = 53/84 (63%), Positives = 66/84 (78%), Gaps = 1/84 (1%)
Frame = +3
Query: 249 PQNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGG-KPKIKVAYKGEDKTFFPEEVSS 425
P NT+FDAKRLIGR+F DA+VQ+D + WPF ++S KP I V YKGE+K F EE+SS
Sbjct: 66 PVNTVFDAKRLIGRRFSDASVQSDRQLWPFTIISGTAEKPMIVVEYKGEEKQFAAEEISS 125
Query: 426 MVLTKMKETAEAYLGKTVQNAVIT 497
MVL KM+E AEA+LG TV+NAV+T
Sbjct: 126 MVLIKMREIAEAFLGTTVKNAVVT 149
>At3g12580.1 68416.m01567 heat shock protein 70, putative / HSP70,
putative strong similarity to heat shock protein
GI:425194 [Spinacia oleracea]
Length = 650
Score = 120 bits (289), Expect = 5e-28
Identities = 54/61 (88%), Positives = 59/61 (96%)
Frame = +1
Query: 70 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 249
+ PA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMN
Sbjct: 6 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMN 65
Query: 250 P 252
P
Sbjct: 66 P 66
Score = 114 bits (274), Expect = 4e-26
Identities = 54/84 (64%), Positives = 66/84 (78%), Gaps = 1/84 (1%)
Frame = +3
Query: 249 PQNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGG-KPKIKVAYKGEDKTFFPEEVSS 425
P NT+FDAKRLIGR++ D +VQAD HWPF+VVS G KP I V +KGE+K F EE+SS
Sbjct: 66 PTNTVFDAKRLIGRRYSDPSVQADKSHWPFKVVSGPGEKPMIVVNHKGEEKQFSAEEISS 125
Query: 426 MVLTKMKETAEAYLGKTVQNAVIT 497
MVL KM+E AEA+LG V+NAV+T
Sbjct: 126 MVLIKMREIAEAFLGSPVKNAVVT 149
>At3g09440.1 68416.m01121 heat shock cognate 70 kDa protein 3
(HSC70-3) (HSP70-3) identical to SP|O65719 Heat shock
cognate 70 kDa protein 3 (Hsc70.3) {Arabidopsis
thaliana}
Length = 649
Score = 120 bits (289), Expect = 5e-28
Identities = 54/61 (88%), Positives = 59/61 (96%)
Frame = +1
Query: 70 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 249
+ PA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMN
Sbjct: 6 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMN 65
Query: 250 P 252
P
Sbjct: 66 P 66
Score = 111 bits (268), Expect = 2e-25
Identities = 53/84 (63%), Positives = 66/84 (78%), Gaps = 1/84 (1%)
Frame = +3
Query: 249 PQNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGG-KPKIKVAYKGEDKTFFPEEVSS 425
P NT+FDAKRLIGR+F D++VQ+D+K WPF + S KP I V YKGEDK F EE+SS
Sbjct: 66 PINTVFDAKRLIGRRFTDSSVQSDIKLWPFTLKSGPAEKPMIVVNYKGEDKEFSAEEISS 125
Query: 426 MVLTKMKETAEAYLGKTVQNAVIT 497
M+L KM+E AEAYLG T++NAV+T
Sbjct: 126 MILIKMREIAEAYLGTTIKNAVVT 149
>At1g56410.1 68414.m06487 heat shock cognate 70 kDa protein,
putative / HSC70, putative / HSP70, putative strong
similarity to heat shock cognate 70 kd protein 1
SP:P22953 [Arabidopsis thaliana (Mouse-ear cress)]
Length = 617
Score = 120 bits (289), Expect = 5e-28
Identities = 54/61 (88%), Positives = 59/61 (96%)
Frame = +1
Query: 70 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 249
+ PA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMN
Sbjct: 6 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMN 65
Query: 250 P 252
P
Sbjct: 66 P 66
Score = 115 bits (277), Expect = 2e-26
Identities = 54/84 (64%), Positives = 66/84 (78%), Gaps = 1/84 (1%)
Frame = +3
Query: 249 PQNTIFDAKRLIGRKFEDATVQADMKHWPFEVV-SDGGKPKIKVAYKGEDKTFFPEEVSS 425
P NT+FDAKRLIGR+F DA+VQ+DMK WPF+V KP I V YKGE+K F EE+SS
Sbjct: 66 PVNTVFDAKRLIGRRFSDASVQSDMKFWPFKVTPGQADKPMIFVNYKGEEKQFAAEEISS 125
Query: 426 MVLTKMKETAEAYLGKTVQNAVIT 497
MVL KM+E AEAYLG +++NAV+T
Sbjct: 126 MVLIKMREIAEAYLGSSIKNAVVT 149
>At1g09080.1 68414.m01013 luminal binding protein 3 (BiP-3) (BP3)
Similar to Arabidopsis luminal binding protein
(gb|D89342); contains Pfam domain PF00012: dnaK protein
Length = 678
Score = 116 bits (278), Expect = 1e-26
Identities = 53/83 (63%), Positives = 68/83 (81%)
Frame = +3
Query: 249 PQNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 428
P+ TIFD KRLIGRKF+D VQ D+K P++VV+ GKP I+V KGE+K F PEE+S+M
Sbjct: 109 PERTIFDPKRLIGRKFDDPDVQRDIKFLPYKVVNKDGKPYIQVKVKGEEKLFSPEEISAM 168
Query: 429 VLTKMKETAEAYLGKTVQNAVIT 497
+LTKMKETAEA+LGK +++AVIT
Sbjct: 169 ILTKMKETAEAFLGKKIKDAVIT 191
Score = 101 bits (243), Expect = 2e-22
Identities = 46/58 (79%), Positives = 52/58 (89%)
Frame = +1
Query: 82 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPK 255
+GIDLGTTYSCVGV+ + VEIIANDQGNR TPS+VAFTDTERLIG+AAKNQ A NP+
Sbjct: 53 IGIDLGTTYSCVGVYHNKHVEIIANDQGNRITPSWVAFTDTERLIGEAAKNQAAKNPE 110
>At5g42020.2 68418.m05116 luminal binding protein 2 (BiP-2) (BP2)
similar to SWISS-PROT: Q39043; GI:1303695; luminal
binding protein (BiP) [Arabidopsis thaliana]
Length = 613
Score = 111 bits (266), Expect = 3e-25
Identities = 52/84 (61%), Positives = 66/84 (78%), Gaps = 1/84 (1%)
Frame = +3
Query: 249 PQNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYK-GEDKTFFPEEVSS 425
P+ T+FD KRLIGRKFED VQ D K P+++V+ GKP I+V K GE K F PEE+S+
Sbjct: 94 PERTVFDVKRLIGRKFEDKEVQKDRKLVPYQIVNKDGKPYIQVKIKDGETKVFSPEEISA 153
Query: 426 MVLTKMKETAEAYLGKTVQNAVIT 497
M+LTKMKETAEAYLGK +++AV+T
Sbjct: 154 MILTKMKETAEAYLGKKIKDAVVT 177
Score = 103 bits (246), Expect = 9e-23
Identities = 45/58 (77%), Positives = 54/58 (93%)
Frame = +1
Query: 82 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPK 255
+GIDLGTTYSCVGV+++G VEIIANDQGNR TPS+V FTD+ERLIG+AAKNQ A+NP+
Sbjct: 38 IGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVGFTDSERLIGEAAKNQAAVNPE 95
>At5g42020.1 68418.m05115 luminal binding protein 2 (BiP-2) (BP2)
similar to SWISS-PROT: Q39043; GI:1303695; luminal
binding protein (BiP) [Arabidopsis thaliana]
Length = 668
Score = 111 bits (266), Expect = 3e-25
Identities = 52/84 (61%), Positives = 66/84 (78%), Gaps = 1/84 (1%)
Frame = +3
Query: 249 PQNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYK-GEDKTFFPEEVSS 425
P+ T+FD KRLIGRKFED VQ D K P+++V+ GKP I+V K GE K F PEE+S+
Sbjct: 94 PERTVFDVKRLIGRKFEDKEVQKDRKLVPYQIVNKDGKPYIQVKIKDGETKVFSPEEISA 153
Query: 426 MVLTKMKETAEAYLGKTVQNAVIT 497
M+LTKMKETAEAYLGK +++AV+T
Sbjct: 154 MILTKMKETAEAYLGKKIKDAVVT 177
Score = 103 bits (246), Expect = 9e-23
Identities = 45/58 (77%), Positives = 54/58 (93%)
Frame = +1
Query: 82 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPK 255
+GIDLGTTYSCVGV+++G VEIIANDQGNR TPS+V FTD+ERLIG+AAKNQ A+NP+
Sbjct: 38 IGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVGFTDSERLIGEAAKNQAAVNPE 95
>At5g28540.1 68418.m03480 luminal binding protein 1 (BiP-1) (BP1)
SWISS-PROT:Q9LKR3 PMID:8888624
Length = 669
Score = 111 bits (266), Expect = 3e-25
Identities = 52/84 (61%), Positives = 66/84 (78%), Gaps = 1/84 (1%)
Frame = +3
Query: 249 PQNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYK-GEDKTFFPEEVSS 425
P+ T+FD KRLIGRKFED VQ D K P+++V+ GKP I+V K GE K F PEE+S+
Sbjct: 94 PERTVFDVKRLIGRKFEDKEVQKDRKLVPYQIVNKDGKPYIQVKIKDGETKVFSPEEISA 153
Query: 426 MVLTKMKETAEAYLGKTVQNAVIT 497
M+LTKMKETAEAYLGK +++AV+T
Sbjct: 154 MILTKMKETAEAYLGKKIKDAVVT 177
Score = 103 bits (246), Expect = 9e-23
Identities = 45/58 (77%), Positives = 54/58 (93%)
Frame = +1
Query: 82 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPK 255
+GIDLGTTYSCVGV+++G VEIIANDQGNR TPS+V FTD+ERLIG+AAKNQ A+NP+
Sbjct: 38 IGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVGFTDSERLIGEAAKNQAAVNPE 95
>At4g37910.1 68417.m05361 heat shock protein 70, mitochondrial,
putative / HSP70, mitochondrial, putative strong
similarity to SP|Q01899 Heat shock 70 kDa protein,
mitochondrial precursor {Phaseolus vulgaris}
Length = 682
Score = 80.2 bits (189), Expect = 7e-16
Identities = 39/83 (46%), Positives = 54/83 (65%)
Frame = +3
Query: 249 PQNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 428
P NTIF +KRLIGR+F+D Q +MK P+++V P + + F P ++ +
Sbjct: 112 PTNTIFGSKRLIGRRFDDPQTQKEMKMVPYKIVK---APNGDAWVEANGQKFSPSQIGAN 168
Query: 429 VLTKMKETAEAYLGKTVQNAVIT 497
VLTKMKETAEAYLGK++ AV+T
Sbjct: 169 VLTKMKETAEAYLGKSINKAVVT 191
Score = 58.4 bits (135), Expect = 2e-09
Identities = 29/58 (50%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Frame = +1
Query: 82 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNP 252
+GIDLGTT SCV V + +I N +G+RTTPS VA E L+G AK Q NP
Sbjct: 55 IGIDLGTTNSCVSVMEGKTARVIENAEGSRTTPSVVAMNQKGELLVGTPAKRQAVTNP 112
>At5g09590.1 68418.m01110 heat shock protein 70 / HSP70 (HSC70-5)
identical to heat shock protein 70 [Arabidopsis
thaliana] GI:6746590
Length = 682
Score = 76.2 bits (179), Expect = 1e-14
Identities = 37/83 (44%), Positives = 52/83 (62%)
Frame = +3
Query: 249 PQNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 428
P NT+ KRLIGRKF+D Q +MK P+++V P + + + P ++ +
Sbjct: 117 PTNTVSGTKRLIGRKFDDPQTQKEMKMVPYKIVR---APNGDAWVEANGQQYSPSQIGAF 173
Query: 429 VLTKMKETAEAYLGKTVQNAVIT 497
+LTKMKETAEAYLGK+V AV+T
Sbjct: 174 ILTKMKETAEAYLGKSVTKAVVT 196
Score = 62.1 bits (144), Expect = 2e-10
Identities = 34/70 (48%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Frame = +1
Query: 61 KMAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQ 237
K A +GIDLGTT SCV V + ++I N +G RTTPS VAF T E L+G AK Q
Sbjct: 53 KPAGNDVIGIDLGTTNSCVAVMEGKNPKVIENAEGARTTPSVVAFNTKGELLVGTPAKRQ 112
Query: 238 VAMNPKTQYS 267
NP S
Sbjct: 113 AVTNPTNTVS 122
>At5g49910.1 68418.m06180 heat shock protein 70 / HSP70 (HSC70-7)
identical to heat shock protein 70 [Arabidopsis
thaliana] GI:6746592
Length = 718
Score = 66.1 bits (154), Expect = 1e-11
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Frame = +1
Query: 61 KMAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQ 237
++ VGIDLGTT S V + GK I+ N +G RTTPS VA+T + +RL+G AK Q
Sbjct: 74 RVVNEKVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKSKDRLVGQIAKRQ 133
Query: 238 VAMNPKTQY 264
+NP+ +
Sbjct: 134 AVVNPENTF 142
Score = 49.6 bits (113), Expect = 1e-06
Identities = 29/83 (34%), Positives = 42/83 (50%)
Frame = +3
Query: 249 PQNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 428
P+NT F KR IGR+ + V + K + V+ D +K+ K F EE+S+
Sbjct: 138 PENTFFSVKRFIGRRMNE--VAEESKQVSYRVIKDENG-NVKLDCPAIGKQFAAEEISAQ 194
Query: 429 VLTKMKETAEAYLGKTVQNAVIT 497
VL K+ + A +L V AVIT
Sbjct: 195 VLRKLVDDASRFLNDKVTKAVIT 217
>At4g24280.1 68417.m03486 heat shock protein 70, putative / HSP70,
putative strong similarity to heat shock protein 70
[Arabidopsis thaliana] GI:6746592; similar to heat shock
70 protein - Spinacia oleracea,PID:g2654208
Length = 718
Score = 66.1 bits (154), Expect = 1e-11
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Frame = +1
Query: 61 KMAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQ 237
++ VGIDLGTT S V + GK I+ N +G RTTPS VA+T + +RL+G AK Q
Sbjct: 74 RVVNEKVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKSGDRLVGQIAKRQ 133
Query: 238 VAMNPKTQY 264
+NP+ +
Sbjct: 134 AVVNPENTF 142
Score = 53.2 bits (122), Expect = 9e-08
Identities = 31/83 (37%), Positives = 43/83 (51%)
Frame = +3
Query: 249 PQNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 428
P+NT F KR IGRK + V + K + VV D +K+ +K F EE+S+
Sbjct: 138 PENTFFSVKRFIGRKMNE--VDEESKQVSYRVVRDENN-NVKLECPAINKQFAAEEISAQ 194
Query: 429 VLTKMKETAEAYLGKTVQNAVIT 497
VL K+ + A +L V AVIT
Sbjct: 195 VLRKLVDDASRFLNDKVTKAVIT 217
>At1g11660.1 68414.m01339 heat shock protein, putative strong
similarity to gb|Z70314 heat-shock protein from
Arabidopsis thaliana and is a member of the PF|00012
Hsp70 protein family
Length = 773
Score = 66.1 bits (154), Expect = 1e-11
Identities = 34/83 (40%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Frame = +3
Query: 249 PQNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDG-GKPKIKVAYKGEDKTFFPEEVSS 425
P++TI KRLIGRKF + VQ D++ +PFE D G +I++ Y GE ++F P ++
Sbjct: 60 PKSTISQLKRLIGRKFREPDVQNDLRLFPFETSEDSDGGIQIRLRYMGEIQSFSPVQILG 119
Query: 426 MVLTKMKETAEAYLGKTVQNAVI 494
M+L+ +K+ AE L V + VI
Sbjct: 120 MLLSHLKQIAEKSLKTPVSDCVI 142
Score = 47.6 bits (108), Expect = 5e-06
Identities = 20/62 (32%), Positives = 35/62 (56%)
Frame = +1
Query: 82 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPKTQ 261
VG D+G + V + ++++ ND+ NR P+ V+F + +R +G AA M+PK+
Sbjct: 4 VGFDVGNENCVIAVAKQRGIDVLLNDESNRENPAMVSFGEKQRFMGAAAAASATMHPKST 63
Query: 262 YS 267
S
Sbjct: 64 IS 65
>At1g79930.1 68414.m09340 heat shock protein, putative contains Pfam
profile: PF00012 Heat shock hsp70 proteins; similar to
heat-shock proteins GB:CAA94389, GB:AAD55461
[Arabidopsis thaliana]
Length = 831
Score = 62.9 bits (146), Expect = 1e-10
Identities = 34/83 (40%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +3
Query: 249 PQNTIFDAKRLIGRKFEDATVQADMKHWPFEVV-SDGGKPKIKVAYKGEDKTFFPEEVSS 425
P+N+I KRLIGR+F D +Q D+K PF V G P I Y GE + F P +V
Sbjct: 60 PKNSISQIKRLIGRQFSDPELQRDIKSLPFSVTEGPDGYPLIHANYLGEKRAFTPTQVMG 119
Query: 426 MVLTKMKETAEAYLGKTVQNAVI 494
M+L+ +K AE L V + I
Sbjct: 120 MMLSNLKGIAEKNLNTAVVDCCI 142
Score = 52.8 bits (121), Expect = 1e-07
Identities = 24/62 (38%), Positives = 32/62 (51%)
Frame = +1
Query: 82 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPKTQ 261
VG D G V V + ++++ ND+ NR TP+ V F D +R IG A MNPK
Sbjct: 4 VGFDFGNENCLVAVARQRGIDVVLNDESNRETPAIVCFGDKQRFIGTAGAASTMMNPKNS 63
Query: 262 YS 267
S
Sbjct: 64 IS 65
>At1g79920.2 68414.m09339 heat shock protein 70, putative / HSP70,
putative contains Pfam profile: PF00012 Heat shock hsp70
proteins; similar to heat-shock proteins GB:CAA94389,
GB:AAD55461 [Arabidopsis thaliana]
Length = 736
Score = 62.1 bits (144), Expect = 2e-10
Identities = 34/83 (40%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +3
Query: 249 PQNTIFDAKRLIGRKFEDATVQADMKHWPFEVV-SDGGKPKIKVAYKGEDKTFFPEEVSS 425
P+N+I KRLIGR+F D +Q D+K PF V G P I Y GE + F P +V
Sbjct: 60 PKNSISQIKRLIGRQFSDPELQRDIKSLPFSVTEGPDGYPLIHANYLGEIRAFTPTQVMG 119
Query: 426 MVLTKMKETAEAYLGKTVQNAVI 494
M+L+ +K AE L V + I
Sbjct: 120 MMLSNLKGIAEKNLNTAVVDCCI 142
Score = 52.8 bits (121), Expect = 1e-07
Identities = 24/62 (38%), Positives = 32/62 (51%)
Frame = +1
Query: 82 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPKTQ 261
VG D G V V + ++++ ND+ NR TP+ V F D +R IG A MNPK
Sbjct: 4 VGFDFGNENCLVAVARQRGIDVVLNDESNRETPAIVCFGDKQRFIGTAGAASTMMNPKNS 63
Query: 262 YS 267
S
Sbjct: 64 IS 65
>At1g79920.1 68414.m09338 heat shock protein 70, putative / HSP70,
putative contains Pfam profile: PF00012 Heat shock hsp70
proteins; similar to heat-shock proteins GB:CAA94389,
GB:AAD55461 [Arabidopsis thaliana]
Length = 736
Score = 62.1 bits (144), Expect = 2e-10
Identities = 34/83 (40%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +3
Query: 249 PQNTIFDAKRLIGRKFEDATVQADMKHWPFEVV-SDGGKPKIKVAYKGEDKTFFPEEVSS 425
P+N+I KRLIGR+F D +Q D+K PF V G P I Y GE + F P +V
Sbjct: 60 PKNSISQIKRLIGRQFSDPELQRDIKSLPFSVTEGPDGYPLIHANYLGEIRAFTPTQVMG 119
Query: 426 MVLTKMKETAEAYLGKTVQNAVI 494
M+L+ +K AE L V + I
Sbjct: 120 MMLSNLKGIAEKNLNTAVVDCCI 142
Score = 52.8 bits (121), Expect = 1e-07
Identities = 24/62 (38%), Positives = 32/62 (51%)
Frame = +1
Query: 82 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPKTQ 261
VG D G V V + ++++ ND+ NR TP+ V F D +R IG A MNPK
Sbjct: 4 VGFDFGNENCLVAVARQRGIDVVLNDESNRETPAIVCFGDKQRFIGTAGAASTMMNPKNS 63
Query: 262 YS 267
S
Sbjct: 64 IS 65
>At2g32120.2 68415.m03926 heat shock protein 70 family protein /
HSP70 family protein similar to SP|P22953 Heat shock
cognate 70 kDa protein 1 (Hsc70.1) {Arabidopsis
thaliana}; contains InterPro accession IPR001023: Heat
shock protein Hsp70
Length = 563
Score = 46.0 bits (104), Expect = 1e-05
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Frame = +3
Query: 261 IFDAKRLIGRKFEDATVQADMKHWPF--EVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVL 434
IF+ KRL+GR D V A K+ PF + + G +P I ++ PEEV ++ L
Sbjct: 93 IFNMKRLVGRVDTDPVVHAS-KNLPFLVQTLDIGVRPFIAALVNNAWRSTTPEEVLAIFL 151
Query: 435 TKMKETAEAYLGKTVQNAVIT 497
+++ AEA L + V+N V+T
Sbjct: 152 VELRLMAEAQLKRPVRNVVLT 172
Score = 34.3 bits (75), Expect = 0.046
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 79 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD 201
A+GID+GT+ + V+ +V I+ N + + S+V F D
Sbjct: 30 ALGIDIGTSQCSIAVWNGSQVHILRNTRNQKLIKSFVTFKD 70
>At2g32120.1 68415.m03925 heat shock protein 70 family protein /
HSP70 family protein similar to SP|P22953 Heat shock
cognate 70 kDa protein 1 (Hsc70.1) {Arabidopsis
thaliana}; contains InterPro accession IPR001023: Heat
shock protein Hsp70
Length = 563
Score = 46.0 bits (104), Expect = 1e-05
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Frame = +3
Query: 261 IFDAKRLIGRKFEDATVQADMKHWPF--EVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVL 434
IF+ KRL+GR D V A K+ PF + + G +P I ++ PEEV ++ L
Sbjct: 93 IFNMKRLVGRVDTDPVVHAS-KNLPFLVQTLDIGVRPFIAALVNNAWRSTTPEEVLAIFL 151
Query: 435 TKMKETAEAYLGKTVQNAVIT 497
+++ AEA L + V+N V+T
Sbjct: 152 VELRLMAEAQLKRPVRNVVLT 172
Score = 34.3 bits (75), Expect = 0.046
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 79 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD 201
A+GID+GT+ + V+ +V I+ N + + S+V F D
Sbjct: 30 ALGIDIGTSQCSIAVWNGSQVHILRNTRNQKLIKSFVTFKD 70
>At4g16660.1 68417.m02517 heat shock protein 70, putative / HSP70,
putative
Length = 867
Score = 36.3 bits (80), Expect = 0.011
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Frame = +1
Query: 67 AKAPAVGIDLGTTYSCVGV--FQHGK--VEIIANDQGNRTTPSYVAFTDTERLIGDAAKN 234
+++ + +DLG+ + V V + G+ + + N+ R +P+ VAF +RL+G+ A
Sbjct: 22 SESAVLSVDLGSEWVKVAVVNLKRGQSPISVAINEMSKRKSPALVAFQSGDRLLGEEAAG 81
Query: 235 QVAMNPKTQYS 267
A P YS
Sbjct: 82 ITARYPNKVYS 92
>At4g24910.1 68417.m03566 hypothetical protein contains Pfam profile
PF04669: Protein of unknown function (DUF579)
Length = 315
Score = 29.5 bits (63), Expect = 1.3
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = -2
Query: 187 HKTEWSCCPGRWR*SPPSRAG--RHQRKSTWYPDRFLLRVLLPFCIFNQSCYLFLKQL 20
H++ S R SPPS +HQR ST +F +R L+P IF S L+ L
Sbjct: 6 HQSSLSILNPLLRFSPPSSPDNPKHQRLSTIKMPKFTVRKLIPLLIFVLSSLSVLRLL 63
>At5g62550.1 68418.m07850 expressed protein
Length = 487
Score = 29.1 bits (62), Expect = 1.7
Identities = 19/65 (29%), Positives = 30/65 (46%)
Frame = -2
Query: 472 LPR*ASAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTSKGQCFMSACTVASSN 293
+PR A VS + ST L SGKK + L +P T++ +S+ + S
Sbjct: 47 MPRRARVVSAVSQSTTVLDLSGKKSVDRTKLPPRRLSIPNKPTSNSSVKSVSSSVTSLSE 106
Query: 292 LRPMR 278
++P R
Sbjct: 107 VKPKR 111
>At4g18375.2 68417.m02727 KH domain-containing protein contains
similarity to RNA-binding KH-domains PF:00013
Length = 606
Score = 29.1 bits (62), Expect = 1.7
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +1
Query: 166 NRTTPSYVAFTDTERLIGDAAKNQVAMNPKTQYSMPNVSSDVSSKMLLC 312
N+ V F+ + LIG A +N + +T+ S+ VS DVS +C
Sbjct: 138 NKECRLLVPFSQSSSLIGKAGENIKRIRRRTRASVKVVSKDVSDPSHVC 186
>At4g18375.1 68417.m02726 KH domain-containing protein contains
similarity to RNA-binding KH-domains PF:00013
Length = 532
Score = 29.1 bits (62), Expect = 1.7
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +1
Query: 166 NRTTPSYVAFTDTERLIGDAAKNQVAMNPKTQYSMPNVSSDVSSKMLLC 312
N+ V F+ + LIG A +N + +T+ S+ VS DVS +C
Sbjct: 138 NKECRLLVPFSQSSSLIGKAGENIKRIRRRTRASVKVVSKDVSDPSHVC 186
>At2g27350.5 68415.m03295 OTU-like cysteine protease family protein
contains Pfam profile PF02338: OTU-like cysteine
protease
Length = 388
Score = 28.7 bits (61), Expect = 2.3
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +2
Query: 77 PQ*ESIWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRT 235
P+ S P + V S G R PT RA GP L+ +P+ S PR+
Sbjct: 122 PKPSSTVNPGSNRSVLGSFGALRIGPTRRAAGPRSLVSSRSSPTGSHPSSPRS 174
>At2g27350.4 68415.m03294 OTU-like cysteine protease family protein
contains Pfam profile PF02338: OTU-like cysteine
protease
Length = 388
Score = 28.7 bits (61), Expect = 2.3
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +2
Query: 77 PQ*ESIWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRT 235
P+ S P + V S G R PT RA GP L+ +P+ S PR+
Sbjct: 122 PKPSSTVNPGSNRSVLGSFGALRIGPTRRAAGPRSLVSSRSSPTGSHPSSPRS 174
>At2g27350.3 68415.m03293 OTU-like cysteine protease family protein
contains Pfam profile PF02338: OTU-like cysteine
protease
Length = 506
Score = 28.7 bits (61), Expect = 2.3
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +2
Query: 77 PQ*ESIWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRT 235
P+ S P + V S G R PT RA GP L+ +P+ S PR+
Sbjct: 122 PKPSSTVNPGSNRSVLGSFGALRIGPTRRAAGPRSLVSSRSSPTGSHPSSPRS 174
>At2g27350.2 68415.m03292 OTU-like cysteine protease family protein
contains Pfam profile PF02338: OTU-like cysteine
protease
Length = 505
Score = 28.7 bits (61), Expect = 2.3
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +2
Query: 77 PQ*ESIWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRT 235
P+ S P + V S G R PT RA GP L+ +P+ S PR+
Sbjct: 122 PKPSSTVNPGSNRSVLGSFGALRIGPTRRAAGPRSLVSSRSSPTGSHPSSPRS 174
>At2g27350.1 68415.m03291 OTU-like cysteine protease family protein
contains Pfam profile PF02338: OTU-like cysteine
protease
Length = 505
Score = 28.7 bits (61), Expect = 2.3
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +2
Query: 77 PQ*ESIWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRT 235
P+ S P + V S G R PT RA GP L+ +P+ S PR+
Sbjct: 122 PKPSSTVNPGSNRSVLGSFGALRIGPTRRAAGPRSLVSSRSSPTGSHPSSPRS 174
>At4g27630.2 68417.m03972 expressed protein
Length = 467
Score = 27.5 bits (58), Expect = 5.3
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = -2
Query: 124 RHQRKSTWYPDRFLLRVLLPFCIFNQSCYLFLK 26
R R W D F L VLL F + CYL L+
Sbjct: 71 REARMVNWKVDLFCLIVLLVFMLPYYHCYLMLR 103
>At1g68330.1 68414.m07805 expressed protein
Length = 268
Score = 27.5 bits (58), Expect = 5.3
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +2
Query: 20 ELF*EQVTRLIKNTKWQKHPQ*ESIWVPRTLALVSSSTGRWRSSPTTRA-TGPLRLMLRS 196
ELF E ++ K + PQ + VPR+ +L SSS+ SS ++RA +RL
Sbjct: 64 ELFSEGKILPVQIKKEESLPQTVTFRVPRSASLSSSSSSSSSSSSSSRAPEKKMRLKELL 123
Query: 197 QTPSVSSEMPPR 232
P E PR
Sbjct: 124 LNPESDFEDKPR 135
>At4g34940.1 68417.m04953 armadillo/beta-catenin repeat family
protein contains Pfam profile: PF00514
armadillo/beta-catenin-like repeat
Length = 664
Score = 27.1 bits (57), Expect = 7.0
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = +3
Query: 195 HRHRASHRRCRQEPGGDEPQNTIFDAKRLIGRKFEDATVQADMK 326
++ +H + P G+ P + + GR++ED +A MK
Sbjct: 378 NQQHQNHTKGGSNPRGNNPTHVSLMGTSIKGREYEDPATKAQMK 421
>At3g25790.1 68416.m03210 myb family transcription factor contains
Pfam domain, PF00249: Myb-like DNA-binding domain
Length = 357
Score = 27.1 bits (57), Expect = 7.0
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +2
Query: 35 QVTRLIKNTKWQKHPQ*ESIWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVS 214
Q T +N++ Q IWVP+T +++ S TT GP+ L S+ P S
Sbjct: 257 QTTPNNRNSQTQHFVVVGGIWVPQTNHSTANAVNAVASGETTGIYGPMVSSLPSEWPRHS 316
Query: 215 S 217
+
Sbjct: 317 N 317
>At1g16800.1 68414.m02018 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 1939
Score = 27.1 bits (57), Expect = 7.0
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = -2
Query: 145 SPPSRAGR-HQRKSTWYPDRFLLRVLLP 65
S PS R +QRK W+ D F L + LP
Sbjct: 28 SDPSAVRRLNQRKEQWFTDAFTLLISLP 55
>At3g29786.1 68416.m03775 hypothetical protein
Length = 195
Score = 26.6 bits (56), Expect = 9.3
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = -2
Query: 424 ELTSSGKKVLSSPLYATLILGLPPSLTTSKGQCFMSACTVASSNLRP 284
E T + + S PL+ ++ +PPS+ T KG F+S+ L P
Sbjct: 139 ETTETQPAMKSIPLWI-ILKNVPPSMFTDKGLEFLSSAVGKPLRLHP 184
>At2g31960.1 68415.m03905 glycosyl transferase family 48 protein
contains Pfam profile: PF02364 1,3-beta-glucan synthase;
contains non-consensus splice aite AC at exon 33
Length = 1959
Score = 26.6 bits (56), Expect = 9.3
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 369 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKT 476
+K AY GED+ F + V+ + T KE + GK+
Sbjct: 369 VKPAYGGEDEAFLQKVVTPIYKTIAKEAKRSRGGKS 404
>At2g15590.2 68415.m01786 expressed protein
Length = 155
Score = 26.6 bits (56), Expect = 9.3
Identities = 15/66 (22%), Positives = 27/66 (40%), Gaps = 4/66 (6%)
Frame = +3
Query: 186 CCVHRHRASHRRCRQEPGGDEPQNTIFDAKRLIGRKFEDATVQADMKHWP----FEVVSD 353
C VHR ++H D + + ++ + + T++ +K W F V
Sbjct: 86 CAVHRQYSNHLSRTSSFASDHEVSNSNNITTIVDKGDDRKTMKQKLKQWAKVVGFSVRHS 145
Query: 354 GGKPKI 371
GKPK+
Sbjct: 146 SGKPKL 151
>At1g05570.1 68414.m00575 callose synthase 1 (CALS1) /
1,3-beta-glucan synthase 1 nearly identical to callose
synthase 1 catalytic subunit [Arabidopsis thaliana]
GI:13649388
Length = 1922
Score = 26.6 bits (56), Expect = 9.3
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 369 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKT 476
+K AY GED+ F + V+ + T KE + GK+
Sbjct: 341 VKPAYGGEDEAFLQKVVTPIYQTISKEAKRSRGGKS 376
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,223,589
Number of Sequences: 28952
Number of extensions: 280441
Number of successful extensions: 880
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 862
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 878448512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -