Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20167
(555 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine hydroxy... 48 5e-08
AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin pr... 25 0.58
AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin pr... 25 0.58
AF506021-1|AAM46897.1| 64|Tribolium castaneum polyubiquitin pr... 25 0.58
AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin pr... 25 0.58
AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less prot... 23 1.4
AY584475-1|AAS93634.1| 209|Tribolium castaneum homothorax protein. 22 4.1
AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein. 22 4.1
EU019709-1|ABU25221.1| 540|Tribolium castaneum aspartate 1-deca... 21 5.5
AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5 prot... 21 5.5
>EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine
hydroxylase protein.
Length = 532
Score = 48.0 bits (109), Expect = 5e-08
Identities = 25/56 (44%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +1
Query: 391 KDNRSAV-PWFPRRIRDLDRFANQILSYGAELDSDHPGFTVLFTGDRRKYFADIAY 555
+DN SA PWFPR DLD + + Y +LD +HPGF RRK A+IA+
Sbjct: 186 EDNISAKNPWFPRHASDLDNCNHLMTKYEPDLDMNHPGFADKEYRARRKEIAEIAF 241
>AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin
protein.
Length = 76
Score = 24.6 bits (51), Expect = 0.58
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 71 QPTSGSPPDKPKLMEGGNYIREGR 142
Q G PPD+ +L+ G + +GR
Sbjct: 31 QDKEGIPPDQQRLIFAGKQLEDGR 54
>AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin
protein.
Length = 685
Score = 24.6 bits (51), Expect = 0.58
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 71 QPTSGSPPDKPKLMEGGNYIREGR 142
Q G PPD+ +L+ G + +GR
Sbjct: 31 QDKEGIPPDQQRLIFAGKQLEDGR 54
Score = 24.6 bits (51), Expect = 0.58
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 71 QPTSGSPPDKPKLMEGGNYIREGR 142
Q G PPD+ +L+ G + +GR
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGR 130
Score = 24.6 bits (51), Expect = 0.58
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 71 QPTSGSPPDKPKLMEGGNYIREGR 142
Q G PPD+ +L+ G + +GR
Sbjct: 183 QDKEGIPPDQQRLIFAGKQLEDGR 206
Score = 24.6 bits (51), Expect = 0.58
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 71 QPTSGSPPDKPKLMEGGNYIREGR 142
Q G PPD+ +L+ G + +GR
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGR 282
Score = 24.6 bits (51), Expect = 0.58
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 71 QPTSGSPPDKPKLMEGGNYIREGR 142
Q G PPD+ +L+ G + +GR
Sbjct: 335 QDKEGIPPDQQRLIFAGKQLEDGR 358
Score = 24.6 bits (51), Expect = 0.58
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 71 QPTSGSPPDKPKLMEGGNYIREGR 142
Q G PPD+ +L+ G + +GR
Sbjct: 487 QDKEGIPPDQQRLIFAGKQLEDGR 510
Score = 24.6 bits (51), Expect = 0.58
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 71 QPTSGSPPDKPKLMEGGNYIREGR 142
Q G PPD+ +L+ G + +GR
Sbjct: 563 QDKEGIPPDQQRLIFAGKQLEDGR 586
Score = 24.6 bits (51), Expect = 0.58
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 71 QPTSGSPPDKPKLMEGGNYIREGR 142
Q G PPD+ +L+ G + +GR
Sbjct: 639 QDKEGIPPDQQRLIFAGKQLEDGR 662
Score = 22.2 bits (45), Expect = 3.1
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +2
Query: 71 QPTSGSPPDKPKLMEGGNYIREGR 142
Q G PPD+ + + G + +GR
Sbjct: 411 QDKEGIPPDQQRSIFAGKQLEDGR 434
>AF506021-1|AAM46897.1| 64|Tribolium castaneum polyubiquitin
protein.
Length = 64
Score = 24.6 bits (51), Expect = 0.58
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 71 QPTSGSPPDKPKLMEGGNYIREGR 142
Q G PPD+ +L+ G + +GR
Sbjct: 31 QDKEGIPPDQQRLIFAGKQLEDGR 54
>AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin
protein.
Length = 112
Score = 24.6 bits (51), Expect = 0.58
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 71 QPTSGSPPDKPKLMEGGNYIREGR 142
Q G PPD+ +L+ G + +GR
Sbjct: 3 QDKEGIPPDQQRLIFAGKQLEDGR 26
Score = 22.2 bits (45), Expect = 3.1
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +2
Query: 71 QPTSGSPPDKPKLMEGGNYIREGR 142
Q G PPD+ + + G + +GR
Sbjct: 79 QDKEGIPPDQQRSIFAGKQLEDGR 102
>AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less
protein.
Length = 312
Score = 23.4 bits (48), Expect = 1.4
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +1
Query: 244 PQPHESRSSTRRPGYEFMVECEHGSG 321
P PHES +ST F+ +HG G
Sbjct: 10 PTPHESNTSTPVSKSAFIELQQHGYG 35
>AY584475-1|AAS93634.1| 209|Tribolium castaneum homothorax protein.
Length = 209
Score = 21.8 bits (44), Expect = 4.1
Identities = 13/48 (27%), Positives = 19/48 (39%)
Frame = +2
Query: 65 IEQPTSGSPPDKPKLMEGGNYIREGRDSTKSTWLLISPAAPDEAGSLA 208
I++ G PP+ G R DST T +P + SL+
Sbjct: 33 IDERDGGKPPELTGSTNGDGGARSNADSTSHTDGASTPDVRPPSSSLS 80
>AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein.
Length = 456
Score = 21.8 bits (44), Expect = 4.1
Identities = 13/48 (27%), Positives = 19/48 (39%)
Frame = +2
Query: 65 IEQPTSGSPPDKPKLMEGGNYIREGRDSTKSTWLLISPAAPDEAGSLA 208
I++ G PP+ G R DST T +P + SL+
Sbjct: 189 IDERDGGKPPELTGSTNGDGGARSNADSTSHTDGASTPDVRPPSSSLS 236
>EU019709-1|ABU25221.1| 540|Tribolium castaneum aspartate
1-decarboxylase protein.
Length = 540
Score = 21.4 bits (43), Expect = 5.5
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +2
Query: 23 LPATEKEMDITAKQIEQPTSGS 88
+PAT ++ D+ IE+P + S
Sbjct: 1 MPATGEDQDLVQDLIEEPATFS 22
>AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5
protein.
Length = 533
Score = 21.4 bits (43), Expect = 5.5
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 430 IRDLDRFANQILSYGAELDSDHPG 501
IR + F NQ G +LD ++PG
Sbjct: 125 IRSVISFMNQYEFDGFDLDWEYPG 148
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,154
Number of Sequences: 336
Number of extensions: 3344
Number of successful extensions: 19
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13725787
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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