Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20167
(555 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66497-9|CAA91286.1| 457|Caenorhabditis elegans Hypothetical pr... 87 1e-17
AF119388-1|AAD31643.1| 457|Caenorhabditis elegans phenylalanine... 87 1e-17
U21308-14|ABB88222.1| 429|Caenorhabditis elegans Tryptophan hyd... 53 2e-07
U21308-13|ABB88221.1| 532|Caenorhabditis elegans Tryptophan hyd... 53 2e-07
AF135186-1|AAD30115.1| 532|Caenorhabditis elegans tryptophan hy... 53 2e-07
U80836-2|AAV58890.1| 454|Caenorhabditis elegans Abnormal catech... 36 0.015
U80836-1|AAV58889.1| 393|Caenorhabditis elegans Abnormal catech... 36 0.015
AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical ... 29 2.2
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 29 3.0
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 29 3.0
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 29 3.0
Z27079-2|CAA81589.1| 205|Caenorhabditis elegans Hypothetical pr... 28 5.2
AC024808-5|AAK29931.1| 789|Caenorhabditis elegans Hypothetical ... 28 5.2
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 27 6.9
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 27 6.9
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 27 6.9
Z81044-7|CAB02805.1| 199|Caenorhabditis elegans Hypothetical pr... 27 9.1
U00040-1|AAA50664.3| 1770|Caenorhabditis elegans Hypothetical pr... 27 9.1
>Z66497-9|CAA91286.1| 457|Caenorhabditis elegans Hypothetical
protein K08F8.4 protein.
Length = 457
Score = 86.6 bits (205), Expect = 1e-17
Identities = 35/55 (63%), Positives = 47/55 (85%)
Frame = +1
Query: 391 KDNRSAVPWFPRRIRDLDRFANQILSYGAELDSDHPGFTVLFTGDRRKYFADIAY 555
K N+ +VPWFP++I D+D+FAN+ILSYGAELD+DHPGF + +RRK+FADIA+
Sbjct: 112 KQNKDSVPWFPQKINDIDQFANRILSYGAELDADHPGFKDMTYRERRKFFADIAF 166
Score = 30.3 bits (65), Expect = 0.97
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +2
Query: 188 DEAGSLARYLGIFSSHGVNLSHM 256
++AG+LA L +F +H VNLSH+
Sbjct: 38 EKAGALAETLKLFQAHDVNLSHI 60
>AF119388-1|AAD31643.1| 457|Caenorhabditis elegans phenylalanine
hydroxylase protein.
Length = 457
Score = 86.6 bits (205), Expect = 1e-17
Identities = 35/55 (63%), Positives = 47/55 (85%)
Frame = +1
Query: 391 KDNRSAVPWFPRRIRDLDRFANQILSYGAELDSDHPGFTVLFTGDRRKYFADIAY 555
K N+ +VPWFP++I D+D+FAN+ILSYGAELD+DHPGF + +RRK+FADIA+
Sbjct: 112 KQNKDSVPWFPQKINDIDQFANRILSYGAELDADHPGFKDMTYRERRKFFADIAF 166
Score = 30.3 bits (65), Expect = 0.97
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +2
Query: 188 DEAGSLARYLGIFSSHGVNLSHM 256
++AG+LA L +F +H VNLSH+
Sbjct: 38 EKAGALAETLKLFQAHDVNLSHI 60
>U21308-14|ABB88222.1| 429|Caenorhabditis elegans Tryptophan
hydroxylase protein1, isoform b protein.
Length = 429
Score = 52.8 bits (121), Expect = 2e-07
Identities = 24/53 (45%), Positives = 32/53 (60%)
Frame = +1
Query: 394 DNRSAVPWFPRRIRDLDRFANQILSYGAELDSDHPGFTVLFTGDRRKYFADIA 552
D + WFP+ I DLD A +++ YGA LD+DHPGF RR FA++A
Sbjct: 77 DATTGSEWFPKSIYDLDICAKRVIMYGAGLDADHPGFKDTEYRQRRMMFAELA 129
>U21308-13|ABB88221.1| 532|Caenorhabditis elegans Tryptophan
hydroxylase protein1, isoform a protein.
Length = 532
Score = 52.8 bits (121), Expect = 2e-07
Identities = 24/53 (45%), Positives = 32/53 (60%)
Frame = +1
Query: 394 DNRSAVPWFPRRIRDLDRFANQILSYGAELDSDHPGFTVLFTGDRRKYFADIA 552
D + WFP+ I DLD A +++ YGA LD+DHPGF RR FA++A
Sbjct: 180 DATTGSEWFPKSIYDLDICAKRVIMYGAGLDADHPGFKDTEYRQRRMMFAELA 232
>AF135186-1|AAD30115.1| 532|Caenorhabditis elegans tryptophan
hydroxylase protein.
Length = 532
Score = 52.8 bits (121), Expect = 2e-07
Identities = 24/53 (45%), Positives = 32/53 (60%)
Frame = +1
Query: 394 DNRSAVPWFPRRIRDLDRFANQILSYGAELDSDHPGFTVLFTGDRRKYFADIA 552
D + WFP+ I DLD A +++ YGA LD+DHPGF RR FA++A
Sbjct: 180 DATTGSEWFPKSIYDLDICAKRVIMYGAGLDADHPGFKDTEYRQRRMMFAELA 232
>U80836-2|AAV58890.1| 454|Caenorhabditis elegans Abnormal
catecholamine distributionprotein 2, isoform b protein.
Length = 454
Score = 36.3 bits (80), Expect = 0.015
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +1
Query: 397 NRSAVPWFPRRIRDLDRFANQILSYGAELDSDHPGFTVLFTGDRRKYFADIA 552
N+S + WFPR I +LD+ + I Y D HPG + RRK+ D A
Sbjct: 112 NQSQI-WFPRHISELDQCSKCITKYEPTTDPRHPGHGDVAYIARRKFLNDQA 162
>U80836-1|AAV58889.1| 393|Caenorhabditis elegans Abnormal
catecholamine distributionprotein 2, isoform a protein.
Length = 393
Score = 36.3 bits (80), Expect = 0.015
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +1
Query: 397 NRSAVPWFPRRIRDLDRFANQILSYGAELDSDHPGFTVLFTGDRRKYFADIA 552
N+S + WFPR I +LD+ + I Y D HPG + RRK+ D A
Sbjct: 182 NQSQI-WFPRHISELDQCSKCITKYEPTTDPRHPGHGDVAYIARRKFLNDQA 232
>AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical
protein Y11D7A.14 protein.
Length = 1464
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/73 (21%), Positives = 36/73 (49%)
Frame = +1
Query: 277 RPGYEFMVECEHGSGDFGAALEELKKNVGYLNIISRNYKDNRSAVPWFPRRIRDLDRFAN 456
+ G E ++E E +F +EE+++N N++ R Y + V +R+ +R
Sbjct: 884 KQGREKLLEKER---EFRKTMEEMEQNEEIFNVLERKYNEQHKKVMKMNDVLREYERKIE 940
Query: 457 QILSYGAELDSDH 495
Q+ +L++++
Sbjct: 941 QLNMEKTDLENEN 953
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = +1
Query: 226 LFSWSQPQPHESRSSTRRPGYEFMVECEHGS-GDF 327
L WS+P S T P +CEH + GDF
Sbjct: 1533 LIGWSEPCSCHGHSQTCNPDTSVCTDCEHNTFGDF 1567
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = +1
Query: 226 LFSWSQPQPHESRSSTRRPGYEFMVECEHGS-GDF 327
L WS+P S T P +CEH + GDF
Sbjct: 1533 LIGWSEPCSCHGHSQTCNPDTSVCTDCEHNTFGDF 1567
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = +1
Query: 226 LFSWSQPQPHESRSSTRRPGYEFMVECEHGS-GDF 327
L WS+P S T P +CEH + GDF
Sbjct: 1533 LIGWSEPCSCHGHSQTCNPDTSVCTDCEHNTFGDF 1567
>Z27079-2|CAA81589.1| 205|Caenorhabditis elegans Hypothetical
protein T05G5.2 protein.
Length = 205
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Frame = -2
Query: 386 FLEIIFRYPTFFFSSSRAAPKSPEPC---SHSTMNS 288
+++ + YPT+F+ S A P P P SH +N+
Sbjct: 159 YMKSLLDYPTYFYQPSTAPPPPPAPTAPQSHLIVNN 194
>AC024808-5|AAK29931.1| 789|Caenorhabditis elegans Hypothetical
protein Y53G8AM.8 protein.
Length = 789
Score = 27.9 bits (59), Expect = 5.2
Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 3/25 (12%)
Frame = +1
Query: 439 LDRFANQILS---YGAELDSDHPGF 504
LD FANQILS G LD+DH +
Sbjct: 305 LDEFANQILSSKYKGTSLDTDHTAY 329
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -2
Query: 386 FLEIIFRYPTFFFSSSRAAPKSPEPC-SHSTMNS 288
FL+ + P ++ + ++P+PC SHST N+
Sbjct: 982 FLDYVVVLPAEYYEGTVLRQRAPQPCLSHSTKNT 1015
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -2
Query: 386 FLEIIFRYPTFFFSSSRAAPKSPEPC-SHSTMNS 288
FL+ + P ++ + ++P+PC SHST N+
Sbjct: 982 FLDYVVVLPAEYYEGTVLRQRAPQPCLSHSTKNT 1015
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -2
Query: 386 FLEIIFRYPTFFFSSSRAAPKSPEPC-SHSTMNS 288
FL+ + P ++ + ++P+PC SHST N+
Sbjct: 982 FLDYVVVLPAEYYEGTVLRQRAPQPCLSHSTKNT 1015
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -2
Query: 386 FLEIIFRYPTFFFSSSRAAPKSPEPC-SHSTMNS 288
FL+ + P ++ + ++P+PC SHST N+
Sbjct: 982 FLDYVVVLPAEYYEGTVLRQRAPQPCLSHSTKNT 1015
>Z81044-7|CAB02805.1| 199|Caenorhabditis elegans Hypothetical
protein C30H6.9 protein.
Length = 199
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -1
Query: 168 RSQVDLVESRPSRM*LPPSINFGLSGGEPDV 76
+S VDLV + P + PP + F L DV
Sbjct: 123 KSFVDLVHTTPDKFSRPPDVRFYLEASSEDV 153
>U00040-1|AAA50664.3| 1770|Caenorhabditis elegans Hypothetical
protein C18H2.1 protein.
Length = 1770
Score = 27.1 bits (57), Expect = 9.1
Identities = 18/71 (25%), Positives = 29/71 (40%)
Frame = +1
Query: 337 LEELKKNVGYLNIISRNYKDNRSAVPWFPRRIRDLDRFANQILSYGAELDSDHPGFTVLF 516
L+E K G+ + YK FP+ IR++++ + L + A+ H L
Sbjct: 715 LDEATKVNGFREVFKPAYKQLLKTPKLFPKEIRNIEKLSKLDLHFAAQ--KGHLHAASLS 772
Query: 517 TGDRRKYFADI 549
D YF I
Sbjct: 773 FNDLETYFDTI 783
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,094,475
Number of Sequences: 27780
Number of extensions: 310355
Number of successful extensions: 1076
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 995
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1076
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1134321766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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