Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20166
         (548 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2F4K1 Cluster: TKL family protein kinase; n=1; Trichom...    36   0.47 
UniRef50_A0DSZ3 Cluster: Chromosome undetermined scaffold_62, wh...    33   4.4  
UniRef50_Q2UDQ4 Cluster: Permease of the major facilitator super...    33   5.8  

>UniRef50_A2F4K1 Cluster: TKL family protein kinase; n=1;
           Trichomonas vaginalis G3|Rep: TKL family protein kinase
           - Trichomonas vaginalis G3
          Length = 774

 Score = 36.3 bits (80), Expect = 0.47
 Identities = 21/50 (42%), Positives = 28/50 (56%)
 Frame = -1

Query: 461 STFLYWDGNVAVFFAGFSTGFDFNSRASPQSPSDIKRESRSFNTSLSSPR 312
           S F  +  N A   A F+ GFD    A+PQ+ S  K ++ SFNT  SSP+
Sbjct: 580 SKFEDYSKNSANSLASFNFGFDSTPSATPQN-SQPKNDNLSFNTDFSSPQ 628


>UniRef50_A0DSZ3 Cluster: Chromosome undetermined scaffold_62, whole
           genome shotgun sequence; n=6; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_62,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1044

 Score = 33.1 bits (72), Expect = 4.4
 Identities = 16/53 (30%), Positives = 26/53 (49%)
 Frame = -1

Query: 242 NNIKLRREVCCFRIMTYVVYF*KRMRSSFLTNIFILTSSTTFLPISKKIPDPI 84
           N +K   E C F ++ ++  F +  +  F+TN  IL S     PI +  P P+
Sbjct: 517 NKVKYFFESCLFILLLFLFIFTEINQIKFVTNTQILVSFQNSYPIQRSYPQPV 569


>UniRef50_Q2UDQ4 Cluster: Permease of the major facilitator
           superfamily; n=1; Aspergillus oryzae|Rep: Permease of
           the major facilitator superfamily - Aspergillus oryzae
          Length = 363

 Score = 32.7 bits (71), Expect = 5.8
 Identities = 14/47 (29%), Positives = 28/47 (59%)
 Frame = -2

Query: 460 PHFFIGTVMSQFSSLVFLQVSILIRVLLHNLHLTSNAKVGPLTLLYL 320
           PH+  G +    + ++ L +  ++ V+LH L++  N KV PLT+ ++
Sbjct: 318 PHYRSGFI----AMIICLALDFILLVILHRLYVLKNKKVNPLTIKFM 360


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 481,903,655
Number of Sequences: 1657284
Number of extensions: 8891413
Number of successful extensions: 26219
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 25342
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26207
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35822246242
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)