Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20166
         (548 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF172277-1|AAF22282.1| 1308|Homo sapiens NgCAM-related related c...    32   1.5  

>AF172277-1|AAF22282.1| 1308|Homo sapiens NgCAM-related related cell
            adhesion molecule protein.
          Length = 1308

 Score = 31.9 bits (69), Expect = 1.5
 Identities = 26/74 (35%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
 Frame = +1

Query: 226  LSLILLLSCTVRTFS*YE*FLGSRYRPIKRGEDREVLKDRLSRLMSDGDCGEARELKSKP 405
            L LILL+ C +R         G +Y P+K  ED     +       DG  GE R L+S  
Sbjct: 1180 LILILLIVCFIRRNK------GGKY-PVKEKEDAHADPEIQPMKEDDGTFGEYRSLESDA 1232

Query: 406  VE-KPAKKTATLPS 444
             + KP KK +  PS
Sbjct: 1233 EDHKPLKKGSRTPS 1246


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,299,671
Number of Sequences: 237096
Number of extensions: 1297108
Number of successful extensions: 3135
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 3062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3135
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5421005376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)