Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20164
         (508 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...   105   3e-25
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...   105   3e-25
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    25   0.45 
AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.          21   7.3  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   7.3  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   7.3  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   9.7  

>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score =  105 bits (252), Expect = 3e-25
 Identities = 46/60 (76%), Positives = 55/60 (91%)
 Frame = +1

Query: 256 GISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGKL 435
           G++AA+SKT VAPIERVKLLLQVQH+SKQI+ +QRYKG++D FVRIPKEQG LS+WRG L
Sbjct: 18  GVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRGNL 77



 Score = 35.9 bits (79), Expect = 2e-04
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = +2

Query: 431 NFANVIRYFPTQALNF 478
           N ANVIRYFPTQALNF
Sbjct: 76  NLANVIRYFPTQALNF 91



 Score = 33.5 bits (73), Expect = 0.001
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = +2

Query: 206 MSNLADPVAFAKDFLA 253
           MS LADPVAFAKDFLA
Sbjct: 1   MSGLADPVAFAKDFLA 16



 Score = 25.4 bits (53), Expect = 0.34
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = +3

Query: 477 FAFKDKYKQV 506
           FAFKDKYKQV
Sbjct: 91  FAFKDKYKQV 100


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score =  105 bits (252), Expect = 3e-25
 Identities = 46/60 (76%), Positives = 55/60 (91%)
 Frame = +1

Query: 256 GISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGKL 435
           G++AA+SKT VAPIERVKLLLQVQH+SKQI+ +QRYKG++D FVRIPKEQG LS+WRG L
Sbjct: 18  GVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRGNL 77



 Score = 35.9 bits (79), Expect = 2e-04
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = +2

Query: 431 NFANVIRYFPTQALNF 478
           N ANVIRYFPTQALNF
Sbjct: 76  NLANVIRYFPTQALNF 91



 Score = 33.5 bits (73), Expect = 0.001
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = +2

Query: 206 MSNLADPVAFAKDFLA 253
           MS LADPVAFAKDFLA
Sbjct: 1   MSGLADPVAFAKDFLA 16



 Score = 25.4 bits (53), Expect = 0.34
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = +3

Query: 477 FAFKDKYKQV 506
           FAFKDKYKQV
Sbjct: 91  FAFKDKYKQV 100


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 25.0 bits (52), Expect = 0.45
 Identities = 14/38 (36%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
 Frame = +1

Query: 352 DQRYKGI-VDAFVRIPKEQGLLSFWRGKLRQRHQVLPD 462
           DQ+Y+ + V+ + ++ KEQG +S   G ++Q  +VLP+
Sbjct: 666 DQQYQVVSVEQYQQL-KEQGQISQVGGGIQQNVEVLPE 702


>AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.
          Length = 147

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +2

Query: 131 VIPHPRVPQLPPRHIHLVKIT 193
           +I  P   +LPP H H   +T
Sbjct: 92  IITIPPTRKLPPLHPHTAMVT 112


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 478 KVERLGREVPDDV 440
           K ER  RE+PDD+
Sbjct: 551 KWERANRELPDDL 563


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 478 KVERLGREVPDDV 440
           K ER  RE+PDD+
Sbjct: 551 KWERANRELPDDL 563


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +1

Query: 328 HVSKQIAADQRYKGIVDAFVRIPK 399
           ++ K IAA   +KG+     RIP+
Sbjct: 763 YIQKMIAAAAPFKGMETQDYRIPE 786


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,425
Number of Sequences: 438
Number of extensions: 2783
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13986774
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)