Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20161
         (338 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4UAB3 Cluster: Putative uncharacterized protein; n=1; ...    35   0.31 
UniRef50_Q8I620 Cluster: Putative uncharacterized protein; n=1; ...    31   5.1  
UniRef50_A5DPY8 Cluster: Putative uncharacterized protein; n=1; ...    31   6.7  
UniRef50_P0A461 Cluster: Modification methylase AvaI (EC 2.1.1.1...    31   6.7  
UniRef50_Q4S249 Cluster: Chromosome undetermined SCAF14764, whol...    30   8.8  

>UniRef50_Q4UAB3 Cluster: Putative uncharacterized protein; n=1;
           Theileria annulata|Rep: Putative uncharacterized protein
           - Theileria annulata
          Length = 812

 Score = 35.1 bits (77), Expect = 0.31
 Identities = 11/25 (44%), Positives = 19/25 (76%)
 Frame = -2

Query: 130 LLTMRHFTKKIVWNKHVNLNNTFTI 56
           L+ ++++ KKI+WNK +N NN F +
Sbjct: 435 LINLKNWRKKIIWNKKINFNNNFIL 459


>UniRef50_Q8I620 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium falciparum 3D7|Rep: Putative uncharacterized
            protein - Plasmodium falciparum (isolate 3D7)
          Length = 1066

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = -2

Query: 136  LLLLTMRHFTKKIVWNKHVNLNNTF--TILLARFQSVAN 26
            L LL +  FTK+ ++N HVN N  +  TIL   F  + N
Sbjct: 999  LYLLLIHFFTKQFLYNSHVNTNLDYFNTILFFYFNQIYN 1037


>UniRef50_A5DPY8 Cluster: Putative uncharacterized protein; n=1;
           Pichia guilliermondii|Rep: Putative uncharacterized
           protein - Pichia guilliermondii (Yeast) (Candida
           guilliermondii)
          Length = 345

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 16/49 (32%), Positives = 28/49 (57%)
 Frame = -2

Query: 199 KSINNTRKHLSVLQLFVVTEPLLLLTMRHFTKKIVWNKHVNLNNTFTIL 53
           K +++T+   S++ L   T PL++LT+ HF+  I+    VN  N F  +
Sbjct: 109 KDVSSTKLVPSLI-LAAATTPLMILTLAHFSSPILPLGSVNTRNRFDFI 156


>UniRef50_P0A461 Cluster: Modification methylase AvaI (EC 2.1.1.113)
           (N(4) cytosine-specific methyltransferase AvaI); n=5;
           Bacteria|Rep: Modification methylase AvaI (EC 2.1.1.113)
           (N(4) cytosine-specific methyltransferase AvaI) -
           Anabaena sp. (strain PCC 7120)
          Length = 482

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = -1

Query: 149 CYRTTTIIDNATLY*KNCLEQTREFEQYFYNFVSTLPKRCER 24
           CY T        L+  +CL+   EFEQ FY+ + T P  C R
Sbjct: 271 CYGTQR--SGINLFNASCLKILPEFEQDFYDCIITSPPYCNR 310


>UniRef50_Q4S249 Cluster: Chromosome undetermined SCAF14764, whole
            genome shotgun sequence; n=2; Tetraodontidae|Rep:
            Chromosome undetermined SCAF14764, whole genome shotgun
            sequence - Tetraodon nigroviridis (Green puffer)
          Length = 1311

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = -2

Query: 148  VTEPLLLLTMRHFTKKIVWNKHVNLNNTFTILLARFQSVANDSNT 14
            V +PL  +     TKK + ++HV L  TF  L+ +  +VA D  T
Sbjct: 1148 VIQPLQSIPTEKITKKPIPDEHVVLKTTFEGLIQKCLAVATDPQT 1192


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 283,980,770
Number of Sequences: 1657284
Number of extensions: 4433740
Number of successful extensions: 8437
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8436
length of database: 575,637,011
effective HSP length: 88
effective length of database: 429,796,019
effective search space used: 10315104456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)