Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20159
         (609 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M22299-1|AAB02844.1|  570|Homo sapiens T-plastin polypeptide pro...    34   0.34 
BC056898-1|AAH56898.1|  630|Homo sapiens plastin 3 (T isoform) p...    34   0.34 
BC039049-1|AAH39049.1|  630|Homo sapiens plastin 3 (T isoform) p...    34   0.34 
BC008588-1|AAH08588.1|  409|Homo sapiens Similar to plastin 3 (T...    34   0.34 
AL589842-1|CAI39884.1|  627|Homo sapiens plastin 3 (T isoform) p...    34   0.34 
AK222801-1|BAD96521.1|  630|Homo sapiens plastin 3 variant protein.    34   0.34 
BC031083-1|AAH31083.1|  629|Homo sapiens PLS1 protein protein.         31   2.4  
AY358246-1|AAQ88613.1|  173|Homo sapiens PAMP6501 protein.             29   9.7  

>M22299-1|AAB02844.1|  570|Homo sapiens T-plastin polypeptide
           protein.
          Length = 570

 Score = 34.3 bits (75), Expect = 0.34
 Identities = 16/61 (26%), Positives = 28/61 (45%)
 Frame = +3

Query: 72  PNGWIDINDPIFDKTGTKMVEIQPLYHAERRFPHAARVDFNTLTTEDLSPGNSTVLEIVG 251
           P  W  +N P + K G  M +++   +A     H A+     +  +DL+ GN T+   + 
Sbjct: 379 PVDWSKVNKPPYPKLGANMKKLENCNYAVELGKHPAKFSLVGIGGQDLNDGNQTLTLALV 438

Query: 252 W 254
           W
Sbjct: 439 W 439


>BC056898-1|AAH56898.1|  630|Homo sapiens plastin 3 (T isoform)
           protein.
          Length = 630

 Score = 34.3 bits (75), Expect = 0.34
 Identities = 16/61 (26%), Positives = 28/61 (45%)
 Frame = +3

Query: 72  PNGWIDINDPIFDKTGTKMVEIQPLYHAERRFPHAARVDFNTLTTEDLSPGNSTVLEIVG 251
           P  W  +N P + K G  M +++   +A     H A+     +  +DL+ GN T+   + 
Sbjct: 439 PVDWSKVNKPPYPKLGANMKKLENCNYAVELGKHPAKFSLVGIGGQDLNDGNQTLTLALV 498

Query: 252 W 254
           W
Sbjct: 499 W 499


>BC039049-1|AAH39049.1|  630|Homo sapiens plastin 3 (T isoform)
           protein.
          Length = 630

 Score = 34.3 bits (75), Expect = 0.34
 Identities = 16/61 (26%), Positives = 28/61 (45%)
 Frame = +3

Query: 72  PNGWIDINDPIFDKTGTKMVEIQPLYHAERRFPHAARVDFNTLTTEDLSPGNSTVLEIVG 251
           P  W  +N P + K G  M +++   +A     H A+     +  +DL+ GN T+   + 
Sbjct: 439 PVDWSKVNKPPYPKLGANMKKLENCNYAVELGKHPAKFSLVGIGGQDLNDGNQTLTLALV 498

Query: 252 W 254
           W
Sbjct: 499 W 499


>BC008588-1|AAH08588.1|  409|Homo sapiens Similar to plastin 3 (T
           isoform) protein.
          Length = 409

 Score = 34.3 bits (75), Expect = 0.34
 Identities = 16/61 (26%), Positives = 28/61 (45%)
 Frame = +3

Query: 72  PNGWIDINDPIFDKTGTKMVEIQPLYHAERRFPHAARVDFNTLTTEDLSPGNSTVLEIVG 251
           P  W  +N P + K G  M +++   +A     H A+     +  +DL+ GN T+   + 
Sbjct: 218 PVDWSKVNKPPYPKLGANMKKLENCNYAVELGKHPAKFSLVGIGGQDLNDGNQTLTLALV 277

Query: 252 W 254
           W
Sbjct: 278 W 278


>AL589842-1|CAI39884.1|  627|Homo sapiens plastin 3 (T isoform)
           protein.
          Length = 627

 Score = 34.3 bits (75), Expect = 0.34
 Identities = 16/61 (26%), Positives = 28/61 (45%)
 Frame = +3

Query: 72  PNGWIDINDPIFDKTGTKMVEIQPLYHAERRFPHAARVDFNTLTTEDLSPGNSTVLEIVG 251
           P  W  +N P + K G  M +++   +A     H A+     +  +DL+ GN T+   + 
Sbjct: 436 PVDWSKVNKPPYPKLGANMKKLENCNYAVELGKHPAKFSLVGIGGQDLNDGNQTLTLALV 495

Query: 252 W 254
           W
Sbjct: 496 W 496


>AK222801-1|BAD96521.1|  630|Homo sapiens plastin 3 variant protein.
          Length = 630

 Score = 34.3 bits (75), Expect = 0.34
 Identities = 16/61 (26%), Positives = 28/61 (45%)
 Frame = +3

Query: 72  PNGWIDINDPIFDKTGTKMVEIQPLYHAERRFPHAARVDFNTLTTEDLSPGNSTVLEIVG 251
           P  W  +N P + K G  M +++   +A     H A+     +  +DL+ GN T+   + 
Sbjct: 439 PVDWSKVNKPPYPKLGANMKKLENCNYAVELGKHPAKFSLVGIGGQDLNDGNQTLTLALV 498

Query: 252 W 254
           W
Sbjct: 499 W 499


>BC031083-1|AAH31083.1|  629|Homo sapiens PLS1 protein protein.
          Length = 629

 Score = 31.5 bits (68), Expect = 2.4
 Identities = 16/61 (26%), Positives = 28/61 (45%)
 Frame = +3

Query: 72  PNGWIDINDPIFDKTGTKMVEIQPLYHAERRFPHAARVDFNTLTTEDLSPGNSTVLEIVG 251
           P  W  +N P +   G  M +I+   +A     + A+     +  +DL+ GNST+   + 
Sbjct: 437 PVNWRHVNKPPYPALGGNMKKIENCNYAVELGKNKAKFSLVGIAGQDLNEGNSTLTLALV 496

Query: 252 W 254
           W
Sbjct: 497 W 497


>AY358246-1|AAQ88613.1|  173|Homo sapiens PAMP6501 protein.
          Length = 173

 Score = 29.5 bits (63), Expect = 9.7
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -2

Query: 341 PHRRKLPIFALAMVNFQELLCNTPYWYLDPANN 243
           PH   LP  A  + + Q  LC  P+W L P+ N
Sbjct: 136 PHPSGLPALATPLTSLQ-FLCVQPFWPLPPSRN 167


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,909,123
Number of Sequences: 237096
Number of extensions: 2294480
Number of successful extensions: 4091
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4091
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6466646650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)