Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20159
         (609 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83233-8|CAB05759.2|  378|Caenorhabditis elegans Hypothetical pr...    31   0.85 
Z11126-6|CAA77471.2|  480|Caenorhabditis elegans Hypothetical pr...    31   0.85 
Z81132-12|CAE17968.1|  326|Caenorhabditis elegans Hypothetical p...    29   2.6  
Z92835-4|CAE54910.1| 1135|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z92835-3|CAB07397.1| 1130|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z92835-2|CAB07396.1| 1133|Caenorhabditis elegans Hypothetical pr...    29   3.4  
AF016676-6|AAG24108.1|  354|Caenorhabditis elegans Seven tm rece...    28   4.5  
Z83236-6|CAB05783.1|  132|Caenorhabditis elegans Hypothetical pr...    27   7.9  
Z79756-8|CAB02122.1|  891|Caenorhabditis elegans Hypothetical pr...    27   7.9  
U80454-8|ABC71798.1|  623|Caenorhabditis elegans Hypothetical pr...    27   7.9  
U80454-7|ABC48245.1|  650|Caenorhabditis elegans Hypothetical pr...    27   7.9  

>Z83233-8|CAB05759.2|  378|Caenorhabditis elegans Hypothetical
           protein K06B4.8 protein.
          Length = 378

 Score = 30.7 bits (66), Expect = 0.85
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +2

Query: 401 GANYAIVTCSACNIPPKIYLYDA-KKETFKLIKDNKKSLVPYKC 529
           G NY  +TCSAC +    +   A KK ++   KDN+ S+   KC
Sbjct: 31  GMNYGALTCSACKM---FFRRSAEKKLSYNCKKDNQCSIAQRKC 71


>Z11126-6|CAA77471.2|  480|Caenorhabditis elegans Hypothetical
           protein ZK643.3a protein.
          Length = 480

 Score = 30.7 bits (66), Expect = 0.85
 Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
 Frame = -3

Query: 127 ILVPVLSKIGSLMSIQPFGSVCS-FTMLHLSFCKSQLIRILIL 2
           +L+PV   +  L++I  F +VC  + +LH SFC+     IL++
Sbjct: 430 MLIPVFG-VQQLLTIYRFRNVCLIYRLLHKSFCRRMCSEILVI 471


>Z81132-12|CAE17968.1|  326|Caenorhabditis elegans Hypothetical
           protein T26E4.16 protein.
          Length = 326

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +2

Query: 350 ISCKEPTCRHVSAMFSPGANYAIVTCSACNI 442
           +S   PTC   +A  + G NY ++ C AC +
Sbjct: 1   MSAGAPTCSICNARETTGFNYGVLCCDACKM 31


>Z92835-4|CAE54910.1| 1135|Caenorhabditis elegans Hypothetical
           protein H19N07.2c protein.
          Length = 1135

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +1

Query: 238 WKLLAGSRYQYGVLHSSSWKFTMAKANMGNFRRCG*MYLVQR 363
           W++LA  R Q G  HS + +   +  N G F +C    L+Q+
Sbjct: 64  WRILAICRNQQGSRHSMNSRVNRSNFNFGFFLQCNNDELLQK 105


>Z92835-3|CAB07397.1| 1130|Caenorhabditis elegans Hypothetical
           protein H19N07.2b protein.
          Length = 1130

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +1

Query: 238 WKLLAGSRYQYGVLHSSSWKFTMAKANMGNFRRCG*MYLVQR 363
           W++LA  R Q G  HS + +   +  N G F +C    L+Q+
Sbjct: 64  WRILAICRNQQGSRHSMNSRVNRSNFNFGFFLQCNNDELLQK 105


>Z92835-2|CAB07396.1| 1133|Caenorhabditis elegans Hypothetical
           protein H19N07.2a protein.
          Length = 1133

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +1

Query: 238 WKLLAGSRYQYGVLHSSSWKFTMAKANMGNFRRCG*MYLVQR 363
           W++LA  R Q G  HS + +   +  N G F +C    L+Q+
Sbjct: 64  WRILAICRNQQGSRHSMNSRVNRSNFNFGFFLQCNNDELLQK 105


>AF016676-6|AAG24108.1|  354|Caenorhabditis elegans Seven tm
           receptor protein 253 protein.
          Length = 354

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -2

Query: 326 LPIFALAMVNFQELLCNTPYWYLDPANNFQY 234
           LP+ A  +VNF+++ C  P++YL   N   Y
Sbjct: 175 LPL-AQHLVNFEDIYCIGPFYYLKDVNGKSY 204


>Z83236-6|CAB05783.1|  132|Caenorhabditis elegans Hypothetical
           protein K10H10.7 protein.
          Length = 132

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 14/46 (30%), Positives = 18/46 (39%)
 Frame = -2

Query: 464 HTGIF*EGCCRRYTLLWRSWLPVKTWPTRAYKSVLCTRYI*PHRRK 327
           H G     CC  Y    R W    TW    Y++  C  +  P R+K
Sbjct: 49  HMGRLKSNCCCIYVAP-RQWDDPSTWEPNEYETEHCRGHTLPERKK 93


>Z79756-8|CAB02122.1|  891|Caenorhabditis elegans Hypothetical
           protein F53C11.5b protein.
          Length = 891

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 15/42 (35%), Positives = 16/42 (38%)
 Frame = -1

Query: 405 APGENMADTCLQVGSLHEIHLTTPPEVAHICLSHGKFPGATM 280
           APG   +    Q  S H    TTPP   H   SH   P   M
Sbjct: 13  APGHGSSGYFSQQESTHHDERTTPPTAFHFPASHQGQPAPVM 54


>U80454-8|ABC71798.1|  623|Caenorhabditis elegans Hypothetical
           protein T16A1.1b protein.
          Length = 623

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 17/69 (24%), Positives = 28/69 (40%)
 Frame = +2

Query: 254 DQDTNTVYYIVAPGNLPWLRQIWATSGGVVRCISCKEPTCRHVSAMFSPGANYAIVTCSA 433
           D DT+T Y      N+PW  +   T G +   + C E  C   + +      + +V  + 
Sbjct: 313 DYDTDTQYRF----NIPWRLRARKTLGFLEIVLFCNEEYCMAWNKIIEADCTFTLVCTNG 368

Query: 434 CNIPPKIYL 460
            NI   + L
Sbjct: 369 SNIEQTLKL 377


>U80454-7|ABC48245.1|  650|Caenorhabditis elegans Hypothetical
           protein T16A1.1a protein.
          Length = 650

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 17/69 (24%), Positives = 28/69 (40%)
 Frame = +2

Query: 254 DQDTNTVYYIVAPGNLPWLRQIWATSGGVVRCISCKEPTCRHVSAMFSPGANYAIVTCSA 433
           D DT+T Y      N+PW  +   T G +   + C E  C   + +      + +V  + 
Sbjct: 313 DYDTDTQYRF----NIPWRLRARKTLGFLEIVLFCNEEYCMAWNKIIEADCTFTLVCTNG 368

Query: 434 CNIPPKIYL 460
            NI   + L
Sbjct: 369 SNIEQTLKL 377


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,525,312
Number of Sequences: 27780
Number of extensions: 357085
Number of successful extensions: 879
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 879
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)