Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20159
         (609 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g43810.1 68418.m05357 pinhead protein (PINHEAD) / zwille prot...    29   1.8  
At3g30500.1 68416.m03859 hypothetical protein includes At2g24900...    29   1.8  
At1g16710.1 68414.m02003 TAZ zinc finger family protein / zinc f...    29   3.2  
At2g41210.1 68415.m05089 phosphatidylinositol-4-phosphate 5-kina...    28   4.2  
At1g15180.1 68414.m01815 MATE efflux family protein contains Pfa...    28   5.6  
At1g15170.1 68414.m01814 MATE efflux family protein similar to r...    28   5.6  
At1g15160.1 68414.m01812 MATE efflux family protein Strong simil...    28   5.6  
At1g15150.1 68414.m01811 MATE efflux family protein similar to r...    28   5.6  
At4g12650.1 68417.m01990 endomembrane protein 70, putative TM4 f...    27   9.7  
At3g11390.1 68416.m01387 DC1 domain-containing protein contains ...    27   9.7  

>At5g43810.1 68418.m05357 pinhead protein (PINHEAD) / zwille protein
           (ZWILLE) identical to SP|Q9XGW1 PINHEAD protein (ZWILLE
           protein) {Arabidopsis thaliana}; contains Pfam profiles
           PF02171: Piwi domain, PF02170: PAZ domain
          Length = 988

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +3

Query: 438 TSLLKYTCMMPRKRHSN*LKTTKNHWY 518
           T+LLK TC  PR R ++ L+T +++ Y
Sbjct: 465 TALLKVTCQRPRDRENDILRTVQHNAY 491


>At3g30500.1 68416.m03859 hypothetical protein includes At2g24900,
           At5g35040, At3g30500, At4g07690
          Length = 257

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -2

Query: 191 EIDPCGVRETTFSMIQRLYLHHFSSSFVENWVVNVD 84
           +++PC    T   M+ R+Y+  F+ +  E WVV VD
Sbjct: 8   DLNPCITCWTICVMVFRMYISFFTDNSFELWVVFVD 43


>At1g16710.1 68414.m02003 TAZ zinc finger family protein / zinc
           finger (ZZ type) family protein contains Pfam profiles
           PF02135: TAZ zinc finger, PF00569: Zinc finger, ZZ type
          Length = 1706

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 14/53 (26%), Positives = 20/53 (37%)
 Frame = +2

Query: 356 CKEPTCRHVSAMFSPGANYAIVTCSACNIPPKIYLYDAKKETFKLIKDNKKSL 514
           C  P CRH  A+     N     C  C +P K Y   A       +K+   ++
Sbjct: 687 CLYPRCRHTKALIGHYKNCKDPRCPVC-VPVKTYQQQANVRALARLKNESSAV 738


>At2g41210.1 68415.m05089 phosphatidylinositol-4-phosphate 5-kinase
           family protein similar to
           phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1
           [Arabidopsis thaliana] GI:3702691; contains Pfam
           profiles PF01504: Phosphatidylinositol-4-phosphate
           5-Kinase, PF02493: MORN repeat
          Length = 772

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +3

Query: 54  VKEHTEPNGWIDINDPIFDKTGTKMVEIQPLYHAERRFPH 173
           V  HT+ +   D ND   D+T T    ++  YHAER  P+
Sbjct: 35  VAPHTDNDTTTDDND---DETTTNRSSLEEFYHAERVLPN 71


>At1g15180.1 68414.m01815 MATE efflux family protein contains Pfam
           profile PF01554: Uncharacterized membrane protein family
          Length = 482

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +1

Query: 121 LKWWRYSLCIMLNVVSRTPQGSISIL 198
           L+WW Y L I+L+ +   PQ   S+L
Sbjct: 273 LEWWSYELIILLSGLLPNPQLETSVL 298


>At1g15170.1 68414.m01814 MATE efflux family protein similar to
           ripening regulated protein DDTFR18 [Lycopersicon
           esculentum] GI:12231296; contains Pfam profile PF01554:
           Uncharacterized membrane protein family
          Length = 481

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +1

Query: 121 LKWWRYSLCIMLNVVSRTPQGSISIL 198
           L+WW Y L I+L+ +   PQ   S+L
Sbjct: 272 LEWWSYELIILLSGLLPNPQLETSVL 297


>At1g15160.1 68414.m01812 MATE efflux family protein Strong
           similarity to gi|4734005 F3L12.7 hypothetical protein
           from Arabidopsis thaliana BAC gb|AC007178; similar to
           ripening regulated protein DDTFR18 [Lycopersicon
           esculentum] GI:12231296; contains Pfam profile PF01554:
           Uncharacterized membrane protein family
          Length = 487

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +1

Query: 121 LKWWRYSLCIMLNVVSRTPQGSISIL 198
           L+WW Y L I+L+ +   PQ   S+L
Sbjct: 269 LEWWSYELIILLSGLLPNPQLETSVL 294


>At1g15150.1 68414.m01811 MATE efflux family protein similar to
           ripening regulated protein DDTFR18 [Lycopersicon
           esculentum] GI:12231296; contains Pfam profile PF01554:
           Uncharacterized membrane protein family
          Length = 487

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +1

Query: 121 LKWWRYSLCIMLNVVSRTPQGSISIL 198
           L+WW Y L I+L+ +   PQ   S+L
Sbjct: 269 LEWWSYELIILLSGLLPNPQLETSVL 294


>At4g12650.1 68417.m01990 endomembrane protein 70, putative TM4
           family;
          Length = 527

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +3

Query: 18  INCDLQKDKCSIVKEH 65
           +NC L+ DK  I+KEH
Sbjct: 111 VNCPLELDKAQIIKEH 126


>At3g11390.1 68416.m01387 DC1 domain-containing protein contains
           Pfam profile PF03107: DC1 domain
          Length = 710

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = +2

Query: 395 SPGANYAIVTCSACNIPPKIYLYDAKKETFKLIKD 499
           SP  +Y ++ CS C+     ++Y   +   +L+KD
Sbjct: 481 SPQNHYDLINCSVCSRKSTGFMYRCSETDCRLLKD 515


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,588,299
Number of Sequences: 28952
Number of extensions: 326353
Number of successful extensions: 898
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 898
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1216725696
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)