Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20158
         (396 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax home...    23   5.4  
AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax home...    23   5.4  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            22   9.4  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            22   9.4  
AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative acetyltr...    22   9.4  

>AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax
           homeotic protein IVa protein.
          Length = 310

 Score = 22.6 bits (46), Expect = 5.4
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 244 RAFTTNPYQI*LKSTYKKIYKGFYS 318
           R    +PY   +++  K+IY+G YS
Sbjct: 61  RTAQESPYDASIQAACKQIYEGSYS 85


>AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax
           homeotic protein IIa protein.
          Length = 327

 Score = 22.6 bits (46), Expect = 5.4
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 244 RAFTTNPYQI*LKSTYKKIYKGFYS 318
           R    +PY   +++  K+IY+G YS
Sbjct: 61  RTAQESPYDASIQAACKQIYEGSYS 85


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 21.8 bits (44), Expect = 9.4
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +3

Query: 336 FRSIYLAXLQLYAHVH 383
           FRS++L   ++YA +H
Sbjct: 928 FRSLFLDGFKMYARLH 943


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 21.8 bits (44), Expect = 9.4
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +3

Query: 336 FRSIYLAXLQLYAHVH 383
           FRS++L   ++YA +H
Sbjct: 929 FRSLFLDGFKMYARLH 944


>AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative
           acetyltransferase protein.
          Length = 471

 Score = 21.8 bits (44), Expect = 9.4
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +3

Query: 69  LYFQRQTNVYYIFYY 113
           LY +RQ N YY +YY
Sbjct: 193 LYARRQ-NCYYYYYY 206


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 356,977
Number of Sequences: 2352
Number of extensions: 5406
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 31212099
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)