Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20156
         (449 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    23   1.8  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   5.4  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    20   9.4  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    20   9.4  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    20   9.4  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       20   9.4  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +3

Query: 339 FGRATRSCRSNWTTWN 386
           FG  T SC   WT WN
Sbjct: 106 FGHET-SCTRYWTCWN 120


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +3

Query: 174 KAYQELMENMGGQDYLVLQDKK 239
           K    ++EN+  +  +V++DKK
Sbjct: 202 KTINNILENLWAKKLIVVKDKK 223


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +1

Query: 214 ITWCSRTKRRSR 249
           +T+CS T RRS+
Sbjct: 146 LTYCSWTSRRSK 157


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 7/17 (41%), Positives = 8/17 (47%)
 Frame = +2

Query: 182 PGTHGKHGRPGLPGAPG 232
           P  HG +     PG PG
Sbjct: 267 PSKHGLNDATAAPGEPG 283


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 256 GLPGQLGRPGIPGL 297
           G PG LGR  +P L
Sbjct: 458 GFPGGLGRAVVPTL 471


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -2

Query: 337 LHYPDHPFVLFH 302
           LH+P H  V++H
Sbjct: 42  LHHPIHQTVIYH 53


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,986
Number of Sequences: 336
Number of extensions: 2239
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10195961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)