Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20156
(449 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0188 + 32212297-32212746 36 0.015
03_06_0187 + 32209924-32210634 36 0.015
07_01_0479 + 3606663-3607448 35 0.035
07_01_0247 + 1813979-1814207,1815293-1815351,1815725-1815802,181... 32 0.24
02_02_0369 - 9505330-9505652,9507262-9507532,9507649-9507690,950... 31 0.32
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 31 0.57
06_01_0145 + 1092764-1093351 31 0.57
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 30 0.99
09_04_0695 - 19547101-19548010,19548089-19548587,19549461-195497... 29 1.7
07_01_0756 + 5819367-5820038,5820847-5821005 29 1.7
02_02_0015 + 6109552-6109650,6110006-6110078,6111937-6111998,611... 29 2.3
07_03_1160 - 24430240-24431268 28 4.0
07_03_0329 + 16840051-16840917,16840999-16841342,16841444-168415... 28 4.0
07_03_0350 + 17077481-17078225,17078585-17078647,17078773-17078786 27 5.3
04_04_0397 - 24921892-24922947,24923486-24923734,24923807-249241... 27 5.3
03_05_0292 + 22846273-22846377,22847161-22847823 27 5.3
01_06_1519 + 37942389-37943702,37944142-37944266,37944358-379444... 27 5.3
12_01_0377 - 2939384-2939505,2939629-2939695,2940324-2940543,294... 27 7.0
08_01_0992 + 10045182-10045917,10046225-10046685 27 7.0
06_03_0794 - 24671955-24672362,24672469-24672505,24672804-246728... 27 7.0
04_01_0238 - 3095098-3095466,3097496-3097526,3098082-3098527 27 7.0
02_04_0654 - 24755339-24755408,24755488-24755624,24756243-247563... 27 7.0
11_01_0385 + 2915532-2916482 27 9.2
07_01_1093 + 10033403-10033984 27 9.2
07_01_0874 - 7261191-7261274,7262291-7262440,7262769-7262916,726... 27 9.2
03_06_0695 - 35599454-35600018,35600445-35600491,35600556-35600672 27 9.2
01_06_0481 - 29646245-29646371,29646474-29646556,29646672-296467... 27 9.2
01_01_1143 - 9064210-9065682 27 9.2
>03_06_0188 + 32212297-32212746
Length = 149
Score = 35.9 bits (79), Expect = 0.015
Identities = 24/56 (42%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = -3
Query: 240 PFCPGAPG----NPGLPCFP*VPGKPFSPFIVKPGRPVGPIGPVSP-FSPIRPVKP 88
P PG PG PG+P P VPG P +V PG P P+ P P PI P P
Sbjct: 46 PAIPGVPGVPAVGPGIPVIPGVPGVP----VVGPGIPFVPVIPGVPVIVPIIPGVP 97
>03_06_0187 + 32209924-32210634
Length = 236
Score = 35.9 bits (79), Expect = 0.015
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = -3
Query: 240 PFCPGAPGNPGLPCFP*VPGKPFSPFIVKPGRPVGPIGPVSP 115
P P PG P +P P VP P +P V P P P+ PV+P
Sbjct: 137 PTIPTIPGVPTIPTVPGVPELPVNPGGVVPTIPKVPLPPVNP 178
>07_01_0479 + 3606663-3607448
Length = 261
Score = 34.7 bits (76), Expect = 0.035
Identities = 27/71 (38%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = -3
Query: 294 PRYTRPTQLSRKSCRP*SPFCPGA-PGNPGLPCFP*VPGKP-FSPFIVKPGRPVGPIGPV 121
P RP Q+ RP P P A PG P P P + G P P V+PG P GP +
Sbjct: 175 PPPMRPPQMPIPFQRP--PGVPPAFPGGPPPPPGPFMRGPPPMGPPQVRPGMPGGPPPGM 232
Query: 120 SPFSPIRPVKP 88
P P P +P
Sbjct: 233 RPGMPPPPFRP 243
Score = 29.1 bits (62), Expect = 1.7
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = -3
Query: 231 PGAPGNPGLPCFP*VPGKPFSPFIVKPGRPVGPIGPVSP 115
PG PG P P +P PF +PG P P GP P
Sbjct: 222 PGMPGGPPPGMRPGMPPPPF-----RPGMPPPPPGPQQP 255
>07_01_0247 +
1813979-1814207,1815293-1815351,1815725-1815802,
1816369-1816536,1816664-1817578
Length = 482
Score = 31.9 bits (69), Expect = 0.24
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = -3
Query: 258 SCRP*SPFCPGAPGNPGLPCF--P*VPGKPFSP-FIVKPGRPVGPIGPVSPFSPIRPVKP 88
S RP +P PG G G+P P VPG P+S F ++P P+ P + P + PV P
Sbjct: 314 SHRPFTPLLPG--GTSGVPMIPPPPVPGSPWSQIFPLRP--PLFPSPELVPSQQLPPVSP 369
>02_02_0369 -
9505330-9505652,9507262-9507532,9507649-9507690,
9508416-9508458,9508853-9508860
Length = 228
Score = 31.5 bits (68), Expect = 0.32
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = -3
Query: 237 FCPGAPGNPGLPCFP*VPGKPFSPFIVKPGRPVG-PIGPVSPFSP-IRP 97
F GAP N L FP +P P + PG P+G P P +P P +RP
Sbjct: 64 FQVGAPFNQHLLSFPGGVPRPRLPILPTPGMPLGVPQVPGAPLMPGVRP 112
Score = 26.6 bits (56), Expect = 9.2
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -3
Query: 231 PGAPGNPGLPCFP*VPGKPFSPFIVKPG 148
PG PG PG P P +P P + PG
Sbjct: 118 PGIPGYPGAPNVPTMPQTGAPPGSMPPG 145
>11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 30.7 bits (66), Expect = 0.57
Identities = 18/56 (32%), Positives = 22/56 (39%)
Frame = -3
Query: 333 ITLITLLSFFTWEPRYTRPTQLSRKSCRP*SPFCPGAPGNPGLPCFP*VPGKPFSP 166
+T + L + PR RP + S P P PG P P PGKP P
Sbjct: 886 VTQLKLANIEKRAPRVPRPPPAPSATANTASALSPPPPRPPGAPPPPPPPGKPGGP 941
>06_01_0145 + 1092764-1093351
Length = 195
Score = 30.7 bits (66), Expect = 0.57
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +1
Query: 262 PGQLGRPGIPGLPGEKGQKGDQG 330
PG+ G+PG PG PG +G+ G G
Sbjct: 15 PGEPGQPGEPGQPGGRGRGGRGG 37
Score = 28.7 bits (61), Expect = 2.3
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 277 RPGIPGLPGEKGQKGDQG 330
+PG PG PGE GQ G +G
Sbjct: 14 QPGEPGQPGEPGQPGGRG 31
Score = 27.5 bits (58), Expect = 5.3
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +1
Query: 256 GLPGQLGRPGIPGLPGEKGQKGDQG 330
G PGQ G PG PG G G+ G G
Sbjct: 16 GEPGQPGEPGQPGGRGRGGRGGRGG 40
Score = 27.5 bits (58), Expect = 5.3
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 203 GRPGLPGAPGQKGDQG 250
G PG PG PGQ G +G
Sbjct: 16 GEPGQPGEPGQPGGRG 31
Score = 27.1 bits (57), Expect = 7.0
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 167 GEKGLPGTHGKHGRPGLPGAPGQKGDQG 250
GE + G+ G+PG PG PG +G G
Sbjct: 7 GEFPVDDQPGEPGQPGEPGQPGGRGRGG 34
Score = 26.6 bits (56), Expect = 9.2
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1
Query: 268 QLGRPGIPGLPGEKGQKGDQG 330
Q G PG PG PG+ G +G G
Sbjct: 14 QPGEPGQPGEPGQPGGRGRGG 34
Score = 26.6 bits (56), Expect = 9.2
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +2
Query: 182 PGTHGKHGRPGLPGAPGQKGDQG 250
PG G+ G PG PG G+ G G
Sbjct: 15 PGEPGQPGEPGQPGGRGRGGRGG 37
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 29.9 bits (64), Expect = 0.99
Identities = 18/56 (32%), Positives = 22/56 (39%)
Frame = -3
Query: 333 ITLITLLSFFTWEPRYTRPTQLSRKSCRP*SPFCPGAPGNPGLPCFP*VPGKPFSP 166
+T + L + PR RP + S P P PG P P PGKP P
Sbjct: 581 VTQLKLANIEKRAPRVPRPPPAPSATANTASALPPPPPRPPGAPPPPPPPGKPGGP 636
>09_04_0695 -
19547101-19548010,19548089-19548587,19549461-19549728,
19551025-19551687,19551849-19552060,19552203-19552593,
19552659-19553107,19553454-19553790
Length = 1242
Score = 29.1 bits (62), Expect = 1.7
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -3
Query: 153 PGRPVGPIGPVSPFSPIRPVKP 88
P PV PIGPVSP P+ P+ P
Sbjct: 509 PLGPVAPIGPVSP-GPVAPLGP 529
Score = 26.6 bits (56), Expect = 9.2
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -3
Query: 144 PVGPIGPVSPFSPIRPVKP 88
P+G P+ P +PI PV P
Sbjct: 503 PIGSAAPLGPVAPIGPVSP 521
>07_01_0756 + 5819367-5820038,5820847-5821005
Length = 276
Score = 29.1 bits (62), Expect = 1.7
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +2
Query: 167 GEKGLPGTHGKHGRPGLPGAPGQKGDQGLQDFRDNWVGLVYLGSQVKKDK 316
GE+G G G G G G+ G +G + + WV + LG VK++K
Sbjct: 12 GERGGFGRGFGRGGRGDRGRGGRGGRRGPRQEEEKWVPVTKLGRLVKENK 61
>02_02_0015 +
6109552-6109650,6110006-6110078,6111937-6111998,
6112315-6112376,6112463-6112556,6112673-6113227,
6113379-6113870,6113967-6114137,6115713-6115817,
6115903-6116052,6116372-6116498,6116585-6116648,
6117147-6117203,6117423-6117555,6117660-6117746
Length = 776
Score = 28.7 bits (61), Expect = 2.3
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -3
Query: 183 GKPFSPFIVKPGRPVGPIGPVSPFSPIRPVKP 88
G+P P + + P PI P P P RP+ P
Sbjct: 262 GEPPKPNVARTIDPPRPIDPPRPIDPPRPIDP 293
>07_03_1160 - 24430240-24431268
Length = 342
Score = 27.9 bits (59), Expect = 4.0
Identities = 20/70 (28%), Positives = 26/70 (37%)
Frame = -3
Query: 216 NPGLPCFP*VPGKPFSPFIVKPGRPVGPIGPVSPFSPIRPVKPWXXXXXXXXXXXXXPCN 37
NP P P P +P +KP +P P P P P +P +P N
Sbjct: 219 NPNGPSIPNQPPQPIPNGPIKPDQPPQP-NPDMPPKPDQPPQPCPDGPPKPDQPPQP--N 275
Query: 36 PCNPGRPRSP 7
P P +P P
Sbjct: 276 PNGPPKPDQP 285
>07_03_0329 +
16840051-16840917,16840999-16841342,16841444-16841574,
16841671-16841792,16841877-16841983,16842104-16842236,
16842342-16842458,16842560-16842667,16842716-16842742,
16842759-16842830,16843462-16843584,16843671-16843833,
16844140-16844264,16844355-16844489,16844574-16844677,
16844772-16844834,16844930-16844993,16845186-16845318,
16845414-16845487,16845603-16845697,16845799-16845830,
16846201-16846355
Length = 1097
Score = 27.9 bits (59), Expect = 4.0
Identities = 21/71 (29%), Positives = 31/71 (43%)
Frame = +2
Query: 32 QGLQGEKGDRGSLGEKGDQGFTGRMGEKGDXXXXXXXXXXXXXXKGEKGLPGTHGKHGRP 211
+G + GD G ++G +G GR G +GD GE+G +G+ G
Sbjct: 86 RGYYDDGGD-GRGYQRGMEGGGGRGGYRGDGDGGYGRGGGGYHGDGERG----YGRGGGG 140
Query: 212 GLPGAPGQKGD 244
G G G +GD
Sbjct: 141 GGGGGGGYRGD 151
>07_03_0350 + 17077481-17078225,17078585-17078647,17078773-17078786
Length = 273
Score = 27.5 bits (58), Expect = 5.3
Identities = 17/45 (37%), Positives = 19/45 (42%)
Frame = -3
Query: 222 PGNPGLPCFP*VPGKPFSPFIVKPGRPVGPIGPVSPFSPIRPVKP 88
PG P LP P +PG P P + P P P P I P P
Sbjct: 95 PGLPTLPQLPTIPGLPQLPTLPTIQIPELPPLPPLPSVSITPGSP 139
>04_04_0397 -
24921892-24922947,24923486-24923734,24923807-24924157,
24924244-24924331,24924466-24924563,24925141-24925362,
24925490-24925585,24926410-24926481,24927156-24927305
Length = 793
Score = 27.5 bits (58), Expect = 5.3
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Frame = +2
Query: 182 PGTHGKHGRPGLPGAPGQKGDQGLQDF----RDNW 274
PGT G PG+PG PG G + + DNW
Sbjct: 490 PGTGGM--MPGMPGTPGMPGSRKMPGMPGLDNDNW 522
Score = 27.5 bits (58), Expect = 5.3
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +2
Query: 176 GLPGTHGKHGRPGLPGAPGQKGD 244
G+PGT G G +PG PG D
Sbjct: 498 GMPGTPGMPGSRKMPGMPGLDND 520
Score = 26.6 bits (56), Expect = 9.2
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -3
Query: 231 PGAPGNPGLPCFP*VPGKP 175
PG PG PG+P +PG P
Sbjct: 497 PGMPGTPGMPGSRKMPGMP 515
>03_05_0292 + 22846273-22846377,22847161-22847823
Length = 255
Score = 27.5 bits (58), Expect = 5.3
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 196 KTWEARITWCSRTKRRSRSTGLPGQLGR 279
++W + +W R +RRSR G G+ GR
Sbjct: 159 RSWRRQWSWRRRRRRRSRMCGGGGRRGR 186
>01_06_1519 +
37942389-37943702,37944142-37944266,37944358-37944499,
37944602-37944848,37946139-37946196,37947629-37947913,
37947988-37948120
Length = 767
Score = 27.5 bits (58), Expect = 5.3
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +1
Query: 124 WSYRSYRPTRLNYKRRKRLTRNSWKTWEARITWCSRTKR 240
+SY + P R+ +R R + W++ +TW R +R
Sbjct: 689 YSYSATLPARVRDPQRGRWPEQCNRGWDSSVTWRCRIRR 727
>12_01_0377 -
2939384-2939505,2939629-2939695,2940324-2940543,
2940655-2940731,2940813-2940878,2940970-2941018,
2941131-2941181,2941262-2941314,2941432-2941486,
2941563-2941651,2941742-2941827,2941933-2941989,
2942086-2942275,2943847-2944005
Length = 446
Score = 27.1 bits (57), Expect = 7.0
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 264 RKSCRP*SPFCPGAPGNPGLP 202
+KSC P +P C +PGNP P
Sbjct: 106 QKSC-PQTPLCASSPGNPVTP 125
>08_01_0992 + 10045182-10045917,10046225-10046685
Length = 398
Score = 27.1 bits (57), Expect = 7.0
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -2
Query: 334 HYPDHPFVLFHLGAQVYQADPIVPEVL*TLIAFLSWS 224
H P H F+ F+ GA++ I ++ T+ A + W+
Sbjct: 328 HVPSHKFLAFNSGARMCPGKSIAVMLMKTIAAAVVWN 364
>06_03_0794 -
24671955-24672362,24672469-24672505,24672804-24672858,
24674044-24674167,24674670-24674903
Length = 285
Score = 27.1 bits (57), Expect = 7.0
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -3
Query: 198 FP*VPGKPFSPFIVKPGRPVGPIGPVSPFSPIRPVKPW 85
+P + G+ + + GRP GP PF+P+RPV P+
Sbjct: 95 YPVIDGRRANCNLAILGRP----GPDIPFAPLRPVIPY 128
>04_01_0238 - 3095098-3095466,3097496-3097526,3098082-3098527
Length = 281
Score = 27.1 bits (57), Expect = 7.0
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +3
Query: 165 KEKKAYQELMENMGGQDYLVLQDKKAIKVYRTSGTIGSAW 284
KE ELM+N DYL A+ ++TS +G W
Sbjct: 117 KELFLVYELMKNGKLNDYLYKSQSAAVLSWQTSSHLGMEW 156
>02_04_0654 -
24755339-24755408,24755488-24755624,24756243-24756326,
24756929-24756944,24758035-24758405
Length = 225
Score = 27.1 bits (57), Expect = 7.0
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = -3
Query: 225 APGNPGLPCFP*VPGKPFSPFIVKPGRPVGPIGPVSPFSP 106
AP P P FP + +P P P R V P+ P P P
Sbjct: 32 APPPPPPPLFPAMSARPQPPRPAHPARFVKPMPPPPPPFP 71
>11_01_0385 + 2915532-2916482
Length = 316
Score = 26.6 bits (56), Expect = 9.2
Identities = 23/57 (40%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = -3
Query: 249 P*SPFCPGAPGN--PGLPCFP*VPGKPFSPFIVKPGRPVGPIGPVSPFSPIRPVKPW 85
P +P P PGN P LP FP P P +P PG P+ P PF P P+ W
Sbjct: 233 PPTPAWP-QPGNKWPPLPPFPSHP--PPTPAWPHPGNQWPPLPPF-PFHP-PPMPAW 284
>07_01_1093 + 10033403-10033984
Length = 193
Score = 26.6 bits (56), Expect = 9.2
Identities = 21/66 (31%), Positives = 30/66 (45%)
Frame = +1
Query: 97 WANGRKR*HWSYRSYRPTRLNYKRRKRLTRNSWKTWEARITWCSRTKRRSRSTGLPGQLG 276
W+ GR+ + YRS R +R R R W+ E R + +RR + G G+ G
Sbjct: 116 WSEGREEAPF-YRSGRESRPQEGADWR--RLQWRRKEGRSERGTVGQRRKTTGGWAGRRG 172
Query: 277 RPGIPG 294
PG G
Sbjct: 173 GPGAEG 178
>07_01_0874 -
7261191-7261274,7262291-7262440,7262769-7262916,
7263136-7263259,7263452-7263653,7263743-7263848,
7263979-7264442
Length = 425
Score = 26.6 bits (56), Expect = 9.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 163 KRRKRLTRNSWKTWEARITWCSRTKRRSRS 252
K R+R+ R K WE + W +RR+RS
Sbjct: 75 KERRRVVR---KAWEKLVRWSRSWRRRNRS 101
>03_06_0695 - 35599454-35600018,35600445-35600491,35600556-35600672
Length = 242
Score = 26.6 bits (56), Expect = 9.2
Identities = 26/80 (32%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = +1
Query: 70 RRKRRPRFYWANGRKR*HWSYRSYRPTRLNYKRRKRLTRNSWKTWEARITWCSRTKRRSR 249
RR+RRP W G R R +++RR+ TR R R +RR R
Sbjct: 141 RRRRRP---WRRGGARGRAEVVVAGKRRRSWRRRRSRTRQ-------RRRRSRRRRRRRR 190
Query: 250 STGLPGQLGRPG-IPGLPGE 306
+ G G+ GR G G P E
Sbjct: 191 TCGGGGRCGRGGDARGRPAE 210
>01_06_0481 - 29646245-29646371,29646474-29646556,29646672-29646752,
29646843-29646899,29647007-29647094,29647304-29647374,
29647457-29647585,29647662-29648051,29648332-29648517,
29648612-29648692,29648787-29648879,29648966-29649086,
29649200-29649409,29649560-29649727,29649898-29650065,
29650144-29650311,29650453-29650620,29650738-29650905,
29651023-29651190,29651567-29651734,29652391-29652558,
29652645-29652812,29655720-29655887,29656069-29656236,
29656391-29656558,29656670-29656837,29657525-29657664,
29658033-29658221,29658243-29658315,29658379-29658452,
29658535-29658654,29658718-29658738,29658794-29658999,
29659094-29659271,29660066-29660126,29660232-29660341,
29660427-29660558,29661091-29661258,29661339-29661465,
29661794-29661831,29663321-29663422,29663505-29663562,
29663659-29663760,29663844-29663990,29664098-29664234,
29664313-29664462,29664561-29664720,29665820-29665878,
29666025-29666181,29666288-29666433,29666523-29666666,
29667242-29667376
Length = 2344
Score = 26.6 bits (56), Expect = 9.2
Identities = 14/56 (25%), Positives = 31/56 (55%)
Frame = +3
Query: 72 EKKETKVLLGEWEKKVTLVLSVLPAYQA*L*KEKKAYQELMENMGGQDYLVLQDKK 239
E ETK L + +K++ +L + A + + + + L EN+G ++ L+L +++
Sbjct: 1455 ENNETKKELADAQKEIEELLDEMQDNVASIAEHEDTIRRLEENVGAKESLLLTERE 1510
>01_01_1143 - 9064210-9065682
Length = 490
Score = 26.6 bits (56), Expect = 9.2
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1
Query: 256 GLPGQLGRPGIPGLPGEKGQKGDQG 330
G LG G+PG+PG G G G
Sbjct: 446 GASAGLGSSGLPGMPGAGGYLGGYG 470
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,301,196
Number of Sequences: 37544
Number of extensions: 255952
Number of successful extensions: 970
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 953
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 871620292
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -