Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20156
(449 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g64450.1 68414.m07306 proline-rich family protein contains pr... 44 4e-05
At2g37410.2 68415.m04588 mitochondrial import inner membrane tra... 39 0.001
At2g37410.1 68415.m04587 mitochondrial import inner membrane tra... 39 0.001
At3g24780.1 68416.m03110 hypothetical protein 36 0.013
At3g02670.1 68416.m00258 proline-rich family protein contains pr... 34 0.051
At1g44222.1 68414.m05107 hypothetical protein 33 0.089
At5g15780.1 68418.m01845 pollen Ole e 1 allergen and extensin fa... 33 0.12
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 31 0.27
At4g32375.1 68417.m04610 glycoside hydrolase family 28 protein /... 29 1.1
At3g60240.1 68416.m06732 MIF4G domain-containing protein / MA3 d... 29 1.1
At3g50570.1 68416.m05531 hydroxyproline-rich glycoprotein family... 29 1.9
At1g73860.1 68414.m08552 kinesin motor protein-related similar t... 29 1.9
At4g25630.1 68417.m03691 fibrillarin 2 (FIB2) identical to fibri... 28 2.5
At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical t... 28 2.5
At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical t... 28 2.5
At5g15410.2 68418.m01803 cyclic nucleotide-regulated ion channel... 28 3.4
At5g15410.1 68418.m01804 cyclic nucleotide-regulated ion channel... 28 3.4
At5g21160.1 68418.m02528 La domain-containing protein / proline-... 27 4.4
At2g33205.1 68415.m04068 TMS membrane family protein / tumour di... 27 5.9
At5g43730.1 68418.m05346 disease resistance protein (CC-NBS-LRR ... 27 7.7
At5g38820.1 68418.m04695 amino acid transporter family protein l... 27 7.7
At4g21300.1 68417.m03077 pentatricopeptide (PPR) repeat-containi... 27 7.7
At3g24550.1 68416.m03083 protein kinase family protein contains ... 27 7.7
At1g74170.1 68414.m08590 leucine-rich repeat family protein cont... 27 7.7
>At1g64450.1 68414.m07306 proline-rich family protein contains
proline rich extensins, INTERPRO:IPR0002965
Length = 342
Score = 44.4 bits (100), Expect = 4e-05
Identities = 24/51 (47%), Positives = 26/51 (50%)
Frame = -3
Query: 249 P*SPFCPGAPGNPGLPCFP*VPGKPFSPFIVKPGRPVGPIGPVSPFSPIRP 97
P +P P GNPG P FP PG P F PG P+ P P SP PI P
Sbjct: 178 PGNPGSPDFSGNPGPPSFPRNPGSP--EFPGNPGAPIIPRNPGSPEFPINP 226
Score = 44.0 bits (99), Expect = 5e-05
Identities = 23/54 (42%), Positives = 27/54 (50%)
Frame = -3
Query: 249 P*SPFCPGAPGNPGLPCFP*VPGKPFSPFIVKPGRPVGPIGPVSPFSPIRPVKP 88
P +P P PGNPG P P PG P P I P P P+ P +P P+ P P
Sbjct: 196 PRNPGSPEFPGNPGAPIIPRNPGSPEFP-INPPRNPGAPVIPRNPNPPVFPGNP 248
Score = 41.1 bits (92), Expect = 3e-04
Identities = 32/84 (38%), Positives = 34/84 (40%), Gaps = 4/84 (4%)
Frame = -3
Query: 249 P*SPFCPGAPGNPGLPCFP*VPGKPFSP----FIVKPGRPVGPIGPVSPFSPIRPVKPWX 82
P P P PGNPG P F PG P P PG P PI P +P SP P+ P
Sbjct: 169 PGYPESPDLPGNPGSPDFSGNPGPPSFPRNPGSPEFPGNPGAPIIPRNPGSPEFPINP-- 226
Query: 81 XXXXXXXXXXXXPCNPCNPGRPRS 10
P P PG PRS
Sbjct: 227 PRNPGAPVIPRNPNPPVFPGNPRS 250
Score = 38.7 bits (86), Expect = 0.002
Identities = 30/80 (37%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = -3
Query: 243 SPFCPGAPGNPGLPCFP*VPGKPFSP-FIVKPGRPVGPIGPVSPFSPIRPVKPWXXXXXX 67
+P P +P PG P P +PG P SP F PG P P P SP P P P
Sbjct: 159 TPRNPDSPYFPGYPESPDLPGNPGSPDFSGNPGPPSFPRNPGSPEFPGNPGAPIIPRNPG 218
Query: 66 XXXXXXXPCNPCNPGRPRSP 7
P P NPG P P
Sbjct: 219 SPEFPINP--PRNPGAPVIP 236
Score = 26.6 bits (56), Expect = 7.7
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = -3
Query: 249 P*SPFCPGAPGNPGLPCFP*VPGKPFSPFIVKPGRPVGP 133
P P PG P + G P FP + G P P G GP
Sbjct: 239 PNPPVFPGNPRSMGPPGFPGIGGPPGFPGTPFGGGGTGP 277
>At2g37410.2 68415.m04588 mitochondrial import inner membrane
translocase (TIM17) nearly identical to SP|Q9SP35
Mitochondrial import inner membrane translocase subunit
TIM17 {Arabidopsis thaliana}
Length = 243
Score = 39.1 bits (87), Expect = 0.001
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2
Query: 167 GEKGLPGTHGKHGRPGLPGAPGQKGDQGLQ 256
G +G+PG G G PG+PG G G QG+Q
Sbjct: 149 GMQGMPGMQGMQGMPGMPGMQGMPGMQGMQ 178
Score = 34.7 bits (76), Expect = 0.029
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +1
Query: 256 GLPGQLGRPGIPGLPGEKGQKGDQG 330
G+PG G G+PG+PG +G G QG
Sbjct: 152 GMPGMQGMQGMPGMPGMQGMPGMQG 176
Score = 32.3 bits (70), Expect = 0.16
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +2
Query: 8 GDRGLPGLQGLQGEKGDRGSLGEKGDQGFTGRMGE 112
G +G+PG+QG+QG G G G G QG +MG+
Sbjct: 149 GMQGMPGMQGMQGMPGMPGMQGMPGMQGM--QMGQ 181
Score = 31.9 bits (69), Expect = 0.21
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 170 EKGLPGTHGKHGRPGLPGAPGQKGDQGLQ 256
+ G+ G G G G+PG PG +G G+Q
Sbjct: 147 DPGMQGMPGMQGMQGMPGMPGMQGMPGMQ 175
Score = 31.5 bits (68), Expect = 0.27
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +2
Query: 182 PGTHGKHGRPGLPGAPGQKGDQGLQDFRDNWVGLVYLGSQVKKDKR 319
PG G G G+ G PG G QG+ + +G + +Q++ + +
Sbjct: 148 PGMQGMPGMQGMQGMPGMPGMQGMPGMQGMQMGQMQSQAQIRSESQ 193
Score = 30.3 bits (65), Expect = 0.63
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 23 PGLQGLQGEKGDRGSLGEKGDQGFTGRMG 109
PG+QG+ G +G +G G G QG G G
Sbjct: 148 PGMQGMPGMQGMQGMPGMPGMQGMPGMQG 176
Score = 29.1 bits (62), Expect = 1.5
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 256 GLPGQLGRPGIPGLPGEKGQKGDQ 327
G+ G G PG+PG+ G G +G Q
Sbjct: 155 GMQGMQGMPGMPGMQGMPGMQGMQ 178
Score = 27.5 bits (58), Expect = 4.4
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1
Query: 262 PGQLGRPGIPGLPGEKGQKGDQG 330
PG G PG+ G+ G G G QG
Sbjct: 148 PGMQGMPGMQGMQGMPGMPGMQG 170
Score = 26.6 bits (56), Expect = 7.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 256 GLPGQLGRPGIPGLPGEKGQKGDQ 327
G+ G G PG+ G+PG +G + Q
Sbjct: 158 GMQGMPGMPGMQGMPGMQGMQMGQ 181
>At2g37410.1 68415.m04587 mitochondrial import inner membrane
translocase (TIM17) nearly identical to SP|Q9SP35
Mitochondrial import inner membrane translocase subunit
TIM17 {Arabidopsis thaliana}
Length = 243
Score = 39.1 bits (87), Expect = 0.001
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2
Query: 167 GEKGLPGTHGKHGRPGLPGAPGQKGDQGLQ 256
G +G+PG G G PG+PG G G QG+Q
Sbjct: 149 GMQGMPGMQGMQGMPGMPGMQGMPGMQGMQ 178
Score = 34.7 bits (76), Expect = 0.029
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +1
Query: 256 GLPGQLGRPGIPGLPGEKGQKGDQG 330
G+PG G G+PG+PG +G G QG
Sbjct: 152 GMPGMQGMQGMPGMPGMQGMPGMQG 176
Score = 32.3 bits (70), Expect = 0.16
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +2
Query: 8 GDRGLPGLQGLQGEKGDRGSLGEKGDQGFTGRMGE 112
G +G+PG+QG+QG G G G G QG +MG+
Sbjct: 149 GMQGMPGMQGMQGMPGMPGMQGMPGMQGM--QMGQ 181
Score = 31.9 bits (69), Expect = 0.21
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 170 EKGLPGTHGKHGRPGLPGAPGQKGDQGLQ 256
+ G+ G G G G+PG PG +G G+Q
Sbjct: 147 DPGMQGMPGMQGMQGMPGMPGMQGMPGMQ 175
Score = 31.5 bits (68), Expect = 0.27
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +2
Query: 182 PGTHGKHGRPGLPGAPGQKGDQGLQDFRDNWVGLVYLGSQVKKDKR 319
PG G G G+ G PG G QG+ + +G + +Q++ + +
Sbjct: 148 PGMQGMPGMQGMQGMPGMPGMQGMPGMQGMQMGQMQSQAQIRSESQ 193
Score = 30.3 bits (65), Expect = 0.63
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 23 PGLQGLQGEKGDRGSLGEKGDQGFTGRMG 109
PG+QG+ G +G +G G G QG G G
Sbjct: 148 PGMQGMPGMQGMQGMPGMPGMQGMPGMQG 176
Score = 29.1 bits (62), Expect = 1.5
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 256 GLPGQLGRPGIPGLPGEKGQKGDQ 327
G+ G G PG+PG+ G G +G Q
Sbjct: 155 GMQGMQGMPGMPGMQGMPGMQGMQ 178
Score = 27.5 bits (58), Expect = 4.4
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1
Query: 262 PGQLGRPGIPGLPGEKGQKGDQG 330
PG G PG+ G+ G G G QG
Sbjct: 148 PGMQGMPGMQGMQGMPGMPGMQG 170
Score = 26.6 bits (56), Expect = 7.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 256 GLPGQLGRPGIPGLPGEKGQKGDQ 327
G+ G G PG+ G+PG +G + Q
Sbjct: 158 GMQGMPGMPGMQGMPGMQGMQMGQ 181
>At3g24780.1 68416.m03110 hypothetical protein
Length = 715
Score = 35.9 bits (79), Expect = 0.013
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -3
Query: 159 VKPGRPVGPIGPVSPFSPIRPVKP 88
V P RPV P+ P+ P P+RPV+P
Sbjct: 72 VNPVRPVRPVRPIRPVRPVRPVRP 95
Score = 34.7 bits (76), Expect = 0.029
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = -3
Query: 159 VKPGRPVGPIGPVSPFSPIRPVK 91
V+P RPV PI PV P P+RPV+
Sbjct: 75 VRPVRPVRPIRPVRPVRPVRPVR 97
>At3g02670.1 68416.m00258 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 217
Score = 33.9 bits (74), Expect = 0.051
Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = -3
Query: 231 PGAPGNPGLPCFP*VPGKP-FSPFIVKPGRPVGPIGPVSPFSP 106
PG PG PG+P P +PG P F P P G P P SP
Sbjct: 111 PGIPGIPGIPGLPGIPGSPGFRLPFPFPSSPGGGSIPGIPGSP 153
Score = 33.5 bits (73), Expect = 0.067
Identities = 22/45 (48%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = -3
Query: 243 SPFCPGAPGNPGLPCFP*VPG--KPFSPFIVKPGRPVGPIGPVSP 115
+P PG PG PGLP P PG PF PF PG P P SP
Sbjct: 110 NPGIPGIPGIPGLPGIPGSPGFRLPF-PFPSSPGGGSIPGIPGSP 153
Score = 32.3 bits (70), Expect = 0.16
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 167 GEKGLPGTHGKHGRPGLPGAPG 232
G G+PG G G PG+PG+PG
Sbjct: 109 GNPGIPGIPGIPGLPGIPGSPG 130
Score = 31.1 bits (67), Expect = 0.36
Identities = 14/22 (63%), Positives = 14/22 (63%)
Frame = +1
Query: 256 GLPGQLGRPGIPGLPGEKGQKG 321
G PG G PGIPGLPG G G
Sbjct: 109 GNPGIPGIPGIPGLPGIPGSPG 130
Score = 29.9 bits (64), Expect = 0.83
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +2
Query: 176 GLPGTHGKHGRPGLPGAPGQKG 241
G PG G G PGLPG PG G
Sbjct: 109 GNPGIPGIPGIPGLPGIPGSPG 130
Score = 29.5 bits (63), Expect = 1.1
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -3
Query: 240 PFCPGAPGNPGLPCFP*VPGKPFSP 166
PF GNPG+P P +PG P P
Sbjct: 102 PFPSSPGGNPGIPGIPGIPGLPGIP 126
Score = 28.3 bits (60), Expect = 2.5
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +1
Query: 265 GQLGRPGIPGLPGEKGQKGDQG 330
G G PGIPG+PG G G G
Sbjct: 109 GNPGIPGIPGIPGLPGIPGSPG 130
Score = 27.9 bits (59), Expect = 3.4
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +2
Query: 194 GKHGRPGLPGAPGQKGDQGLQDFR 265
G G PG+PG PG G G FR
Sbjct: 109 GNPGIPGIPGIPGLPGIPGSPGFR 132
Score = 27.9 bits (59), Expect = 3.4
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1
Query: 274 GRPGIPGLPGEKGQKGDQGN 333
G PGIPG+PG G G G+
Sbjct: 109 GNPGIPGIPGIPGLPGIPGS 128
Score = 26.6 bits (56), Expect = 7.7
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 185 GTHGKHGRPGLPGAPGQKGDQGLQ 256
G G G PG+PG PG G G +
Sbjct: 109 GNPGIPGIPGIPGLPGIPGSPGFR 132
>At1g44222.1 68414.m05107 hypothetical protein
Length = 85
Score = 33.1 bits (72), Expect = 0.089
Identities = 27/78 (34%), Positives = 32/78 (41%)
Frame = +2
Query: 17 GLPGLQGLQGEKGDRGSLGEKGDQGFTGRMGEKGDXXXXXXXXXXXXXXKGEKGLPGTHG 196
G G G+ G G G LG G G GR+G G G G+PG G
Sbjct: 3 GRLGRPGMLGSPGMLGILGMFGISGMVGRLGILGRL--------------GMMGIPGMLG 48
Query: 197 KHGRPGLPGAPGQKGDQG 250
HG G PG+ GD+G
Sbjct: 49 SHGMLGNPGS-NTGGDRG 65
Score = 27.1 bits (57), Expect = 5.9
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +1
Query: 244 SRSTGLPGQLGRPGIPGLPGEKGQKGDQGN 333
S G G LGR G+ G+PG G G GN
Sbjct: 26 SGMVGRLGILGRLGMMGIPGMLGSHGMLGN 55
>At5g15780.1 68418.m01845 pollen Ole e 1 allergen and extensin
family protein contains Pfam profile PF01190: Pollen
proteins Ole e I family
Length = 401
Score = 32.7 bits (71), Expect = 0.12
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = -3
Query: 231 PGAPGNPGLPCFP*VPGKPFSPFIVKPGRPVGPIGP 124
P PG PG+P P +PG P +P I PG P P+ P
Sbjct: 362 PPVPGLPGIPPVPLIPGIPPAPLI--PGIP--PLSP 393
Score = 27.9 bits (59), Expect = 3.4
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -3
Query: 240 PFCPGAPGNPGLPCFP*VPGKPFSPFI 160
P PG PG P +P P +P P P I
Sbjct: 362 PPVPGLPGIPPVPLIPGIPPAPLIPGI 388
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 31.5 bits (68), Expect = 0.27
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = -3
Query: 249 P*SPFCPGAPGNPGLPCFP*VPGKPFSPFIVKPGRPVGPIGPVSPFSPI 103
P +P P P +PG P +P PF+ P P P+ PV P PI
Sbjct: 561 PPTPSTPPTPISPGQNSPPIIPSPPFTG-PSPPSSPSPPLPPVIPSPPI 608
>At4g32375.1 68417.m04610 glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein similar to
polygalacturonase [Lycopersicon esculentum] GI:4325090;
contains Pfam profile PF00295: Polygalacturonase
(pectinase)
Length = 486
Score = 29.5 bits (63), Expect = 1.1
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = -3
Query: 231 PGAPGNPGLPCFP*VPGKPFSPFIVKPGRPVGPIGPVSP 115
P P P P P KP +P KP R VGP+ P P
Sbjct: 363 PLVPVEPPQQVEPPTPTKPLAP--AKPPRHVGPLMPTKP 399
>At3g60240.1 68416.m06732 MIF4G domain-containing protein / MA3
domain-containing protein similar to eukaryotic protein
synthesis initiation factor [Homo sapiens] GI:3941724;
contains Pfam profiles PF02854: MIF4G domain, PF02847:
MA3 domain
Length = 1544
Score = 29.5 bits (63), Expect = 1.1
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = -3
Query: 237 FCPGAPGNPGLPCFP*VPGKPFSPFIVKPGRPVGPIGPVSPFSP 106
F PG GN G+ P + G P I +P +PVGP+G + +P
Sbjct: 827 FRPGQGGNSGVLRNPRMQG----PIISRPMQPVGPMGGMGRNTP 866
>At3g50570.1 68416.m05531 hydroxyproline-rich glycoprotein family
protein contains proline-rich protein domains,
INTERPRO:IPR000694
Length = 189
Score = 28.7 bits (61), Expect = 1.9
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Frame = -3
Query: 240 PFCPGAP--GNPGLPCFP*VPGKPFSPFIV 157
P PG P PGLP P +PG PF +V
Sbjct: 81 PNIPGIPIPNIPGLPNIPGLPGPPFESLLV 110
>At1g73860.1 68414.m08552 kinesin motor protein-related similar to
kinesin-C GB:AAF04841 from [Strongylocentrotus
purpuratus]
Length = 1030
Score = 28.7 bits (61), Expect = 1.9
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 171 SPFIVKPGRPVGPIGPVSPFSPIRPV 94
+P +PG P G P SPFSP P+
Sbjct: 2 NPMRDQPGSPYGDSTPRSPFSPFSPL 27
Score = 26.6 bits (56), Expect = 7.7
Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Frame = -3
Query: 222 PGNPGLPCFP*VPGKPFSPFIV--KPGRPVGPIGPVSPFSPIRPV 94
PG+P P P PFSP V + P SPFSP P+
Sbjct: 8 PGSPYGDSTPRSPFSPFSPLSVDDRHRNHADTKTPRSPFSPFSPL 52
>At4g25630.1 68417.m03691 fibrillarin 2 (FIB2) identical to
fibrillarin 2 GI:9965655 from [Arabidopsis thaliana]
Length = 320
Score = 28.3 bits (60), Expect = 2.5
Identities = 21/69 (30%), Positives = 25/69 (36%)
Frame = +2
Query: 35 GLQGEKGDRGSLGEKGDQGFTGRMGEKGDXXXXXXXXXXXXXXKGEKGLPGTHGKHGRPG 214
G G +G G G +GD GF+G G G +G P G G G
Sbjct: 11 GFSGGRGRGGYSGGRGDGGFSGGRGGGG---RGGGRGFSDRGGRGRGRGPPRGGARGGRG 67
Query: 215 LPGAPGQKG 241
G G KG
Sbjct: 68 PAGRGGMKG 76
>At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 28.3 bits (60), Expect = 2.5
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = -3
Query: 288 YTRPTQLSRKSCRP*SPFC-PGAPGNPGLPCFP*V-PGKPFSPFIVKPGRPV 139
Y+ P + P SP PG P G P P + PG P +PFI P P+
Sbjct: 137 YSSPPPRTPVVVTPPSPIVDPGTPIIGGSPPTPIIDPGTPGTPFIPAPFPPI 188
>At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 28.3 bits (60), Expect = 2.5
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = -3
Query: 288 YTRPTQLSRKSCRP*SPFC-PGAPGNPGLPCFP*V-PGKPFSPFIVKPGRPV 139
Y+ P + P SP PG P G P P + PG P +PFI P P+
Sbjct: 137 YSSPPPRTPVVVTPPSPIVDPGTPIIGGSPPTPIIDPGTPGTPFIPAPFPPI 188
>At5g15410.2 68418.m01803 cyclic nucleotide-regulated ion channel /
cyclic nucleotide-gated channel (CNGC2) identical to
cyclic nucleotide-gated cation channel GI:3894399 from
[Arabidopsis thaliana]
Length = 593
Score = 27.9 bits (59), Expect = 3.4
Identities = 14/34 (41%), Positives = 15/34 (44%), Gaps = 3/34 (8%)
Frame = +3
Query: 336 RFGRATRSCRSNWTTW---NSWYYWGKRRSRREG 428
R R R SNW TW N W +RR R G
Sbjct: 520 RLKRTARYYSSNWRTWAAVNIQMAWRRRRKRTRG 553
Score = 26.6 bits (56), Expect = 7.7
Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +1
Query: 139 YRPTRLNYKRRKRLTRNSWKTWEA---RITWCSRTKRRSRSTGLPGQL 273
Y+ KR R ++W+TW A ++ W R ++R+R + G +
Sbjct: 514 YKFANERLKRTARYYSSNWRTWAAVNIQMAW-RRRRKRTRGENIGGSM 560
>At5g15410.1 68418.m01804 cyclic nucleotide-regulated ion channel /
cyclic nucleotide-gated channel (CNGC2) identical to
cyclic nucleotide-gated cation channel GI:3894399 from
[Arabidopsis thaliana]
Length = 726
Score = 27.9 bits (59), Expect = 3.4
Identities = 14/34 (41%), Positives = 15/34 (44%), Gaps = 3/34 (8%)
Frame = +3
Query: 336 RFGRATRSCRSNWTTW---NSWYYWGKRRSRREG 428
R R R SNW TW N W +RR R G
Sbjct: 653 RLKRTARYYSSNWRTWAAVNIQMAWRRRRKRTRG 686
Score = 26.6 bits (56), Expect = 7.7
Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +1
Query: 139 YRPTRLNYKRRKRLTRNSWKTWEA---RITWCSRTKRRSRSTGLPGQL 273
Y+ KR R ++W+TW A ++ W R ++R+R + G +
Sbjct: 647 YKFANERLKRTARYYSSNWRTWAAVNIQMAW-RRRRKRTRGENIGGSM 693
>At5g21160.1 68418.m02528 La domain-containing protein /
proline-rich family protein contains proline-rich
extensin domains, INTERPRO:IPR002965, PF05383: La domain
Length = 826
Score = 27.5 bits (58), Expect = 4.4
Identities = 24/83 (28%), Positives = 29/83 (34%), Gaps = 8/83 (9%)
Frame = -3
Query: 240 PFCPGAP-GNPGLPCFP*VPGKPFS---PFIVKPGRP----VGPIGPVSPFSPIRPVKPW 85
PF P P + P FP P P+ P + + G P+ PV P P KPW
Sbjct: 137 PFPPMVPLPHAAGPDFPYAPYPPYPVPVPPVTESGNEKQVQASPLPPVLPAPQGDPGKPW 196
Query: 84 XXXXXXXXXXXXXPCNPCNPGRP 16
P N GRP
Sbjct: 197 PHQRGFDPRNMPQGAGPRNFGRP 219
>At2g33205.1 68415.m04068 TMS membrane family protein / tumour
differentially expressed (TDE) family protein contains
Pfam domain, PF03348: TMS membrane protein/tumour
differentially expressed protein (TDE)
Length = 421
Score = 27.1 bits (57), Expect = 5.9
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = -3
Query: 333 ITLITLLSFFTWEPRYTRPTQLSRKSC 253
+ L++++ F TW Y P S++SC
Sbjct: 169 LQLVSVIEFITWWNNYWMPQNQSKQSC 195
>At5g43730.1 68418.m05346 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 848
Score = 26.6 bits (56), Expect = 7.7
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +1
Query: 205 EARITWCSRTKRRSRSTGLPG--QLGRPGIPGLPGEK 309
E I W S+ +R RST PG QL + GL G +
Sbjct: 717 EIEIDWLSKERRDHRSTSSPGFKQLASITVIGLVGPR 753
>At5g38820.1 68418.m04695 amino acid transporter family protein low
similarity to N system amino acids transporter NAT-1
[Mus musculus] GI:7406950; contains Pfam profile
PF01490: Transmembrane amino acid transporter protein
Length = 456
Score = 26.6 bits (56), Expect = 7.7
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -3
Query: 369 WTYKTWWPCQTFITLITLLSFF 304
W +WW +TF+ L+T L+ F
Sbjct: 154 WFGISWWNRRTFVLLVTTLTVF 175
>At4g21300.1 68417.m03077 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 857
Score = 26.6 bits (56), Expect = 7.7
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +1
Query: 154 LNYKRRKRLTRNSWKTWEARITWCSRTKRRSRSTGLPGQLGRPGI 288
L Y+ +RL++ +W + IT C+++ S + + Q+G GI
Sbjct: 494 LAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGI 538
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 26.6 bits (56), Expect = 7.7
Identities = 22/69 (31%), Positives = 27/69 (39%)
Frame = -3
Query: 294 PRYTRPTQLSRKSCRP*SPFCPGAPGNPGLPCFP*VPGKPFSPFIVKPGRPVGPIGPVSP 115
P + P + S P SP P P P +P P SP PG P+ SP
Sbjct: 29 PAASSPPPTTTPSSPPPSPSTNSTSPPPSSPLPPSLP--PPSP----PGSLTPPLPQPSP 82
Query: 114 FSPIRPVKP 88
+PI P P
Sbjct: 83 SAPITPSPP 91
>At1g74170.1 68414.m08590 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Cf-2.2 [Lycopersicon
pimpinellifolium] gi|1184077|gb|AAC15780
Length = 1068
Score = 26.6 bits (56), Expect = 7.7
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +3
Query: 81 ETKVLLGEWEKKVTLVLSVLPAYQA*L*KEKKAYQEL 191
E K+ LG++ V L+L L Y++ + KE+KA EL
Sbjct: 2 EGKLFLGQYLICVILLLGQLHGYKSCIEKERKALLEL 38
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,597,839
Number of Sequences: 28952
Number of extensions: 191540
Number of successful extensions: 700
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 661
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 732537840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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