Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20153
         (461 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF517634-1|AAM77747.1| 4876|Drosophila melanogaster BIR-containi...    29   3.0  
AE014297-1135|AAF54520.3| 4876|Drosophila melanogaster CG6303-PA...    29   3.0  
BT023888-1|ABA81822.1|  711|Drosophila melanogaster RE31086p pro...    28   5.3  
AY052071-1|AAK93495.1|  574|Drosophila melanogaster SD02622p pro...    28   5.3  
AE014296-3537|AAF51723.2|  711|Drosophila melanogaster CG5664-PA...    28   5.3  

>AF517634-1|AAM77747.1| 4876|Drosophila melanogaster BIR-containing
            ubiquitin-conjugatingenzyme protein.
          Length = 4876

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 13/53 (24%), Positives = 29/53 (54%)
 Frame = +3

Query: 9    DKCLLPQYKDIIILKYLSHLSNFLSFRESGRNVGTFCVVYSLILLK*SLHVSE 167
            ++ ++P+Y DI++    +      S + +G ++ T C+ + L+L + S   SE
Sbjct: 3949 NQLVIPEYSDIVLAGDATISQVLASLQNAGHSLSTPCISFDLVLQQRSDDTSE 4001


>AE014297-1135|AAF54520.3| 4876|Drosophila melanogaster CG6303-PA
            protein.
          Length = 4876

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 13/53 (24%), Positives = 29/53 (54%)
 Frame = +3

Query: 9    DKCLLPQYKDIIILKYLSHLSNFLSFRESGRNVGTFCVVYSLILLK*SLHVSE 167
            ++ ++P+Y DI++    +      S + +G ++ T C+ + L+L + S   SE
Sbjct: 3949 NQLVIPEYSDIVLAGDATISQVLASLQNAGHSLSTPCISFDLVLQQRSDDTSE 4001


>BT023888-1|ABA81822.1|  711|Drosophila melanogaster RE31086p
           protein.
          Length = 711

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 10/22 (45%), Positives = 18/22 (81%)
 Frame = +3

Query: 30  YKDIIILKYLSHLSNFLSFRES 95
           YK++ +  +L++L+NFLS+ ES
Sbjct: 675 YKEVDVSDWLTYLNNFLSYEES 696


>AY052071-1|AAK93495.1|  574|Drosophila melanogaster SD02622p
           protein.
          Length = 574

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 10/22 (45%), Positives = 18/22 (81%)
 Frame = +3

Query: 30  YKDIIILKYLSHLSNFLSFRES 95
           YK++ +  +L++L+NFLS+ ES
Sbjct: 538 YKEVDVSDWLTYLNNFLSYEES 559


>AE014296-3537|AAF51723.2|  711|Drosophila melanogaster CG5664-PA
           protein.
          Length = 711

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 10/22 (45%), Positives = 18/22 (81%)
 Frame = +3

Query: 30  YKDIIILKYLSHLSNFLSFRES 95
           YK++ +  +L++L+NFLS+ ES
Sbjct: 675 YKEVDVSDWLTYLNNFLSYEES 696


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,455,114
Number of Sequences: 53049
Number of extensions: 283501
Number of successful extensions: 736
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 736
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1539014778
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)