Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20152
         (354 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT025221-1|ABF17912.1| 1427|Drosophila melanogaster FI01019p pro...    28   3.0  
AY118404-1|AAM48433.1| 1016|Drosophila melanogaster RE61305p pro...    28   3.0  
AE014297-4201|AAF56762.2| 1427|Drosophila melanogaster CG4976-PA...    28   3.0  

>BT025221-1|ABF17912.1| 1427|Drosophila melanogaster FI01019p
           protein.
          Length = 1427

 Score = 28.3 bits (60), Expect = 3.0
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 189 QSPXSPHTPRYDXRRGHATITDKMMT 266
           +SP  P TPR +    H  I DK++T
Sbjct: 874 ESPAVPSTPRKEDSSSHTPIEDKLLT 899


>AY118404-1|AAM48433.1| 1016|Drosophila melanogaster RE61305p
           protein.
          Length = 1016

 Score = 28.3 bits (60), Expect = 3.0
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 189 QSPXSPHTPRYDXRRGHATITDKMMT 266
           +SP  P TPR +    H  I DK++T
Sbjct: 463 ESPAVPSTPRKEDSSSHTPIEDKLLT 488


>AE014297-4201|AAF56762.2| 1427|Drosophila melanogaster CG4976-PA
           protein.
          Length = 1427

 Score = 28.3 bits (60), Expect = 3.0
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 189 QSPXSPHTPRYDXRRGHATITDKMMT 266
           +SP  P TPR +    H  I DK++T
Sbjct: 874 ESPAVPSTPRKEDSSSHTPIEDKLLT 899


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.305    0.120    0.333 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,436,446
Number of Sequences: 53049
Number of extensions: 49323
Number of successful extensions: 49
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 859222404
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (22.0 bits)