BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbS20151 (356 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr ... 29 0.16 SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 27 0.86 SPBC31E1.01c |atg2|mug36, SPBC660.18c|autophagy associated prote... 25 2.6 SPAC23E2.03c |ste7||meiotic suppressor protein Ste7|Schizosaccha... 25 2.6 SPAC1486.10 |thi1|ntf1, SPAC6G10.01|transcription factor Thi1|Sc... 25 2.6 SPCC1795.09 |yps1||aspartic protease Yps1|Schizosaccharomyces po... 25 2.6 SPAC22F8.11 |plc1||phosphoinositide phospholipase C Plc1|Schizos... 25 2.6 SPBC3D6.03c |||tRNA endonuclease |Schizosaccharomyces pombe|chr ... 25 3.5 SPAC23H3.04 |||conserved fungal protein|Schizosaccharomyces pomb... 25 3.5 SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr 1||... 25 4.6 SPBC2F12.03c |||EST1 family protein|Schizosaccharomyces pombe|ch... 24 6.1 >SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr 1|||Manual Length = 255 Score = 29.5 bits (63), Expect = 0.16 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 2/52 (3%) Frame = +1 Query: 55 MLAVSAGVV--ELSADTSNQDLEEKLYNSILTGDYDSAVRQSLEYESQGKGS 204 ++ +AG+ LS + N+D+ K+ L G Y +A ++ QGKGS Sbjct: 91 VMIANAGIAIPHLSLEDKNEDIWTKVVGINLNGAYYTAQAAGHHFKKQGKGS 142 >SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizosaccharomyces pombe|chr 2|||Manual Length = 1224 Score = 27.1 bits (57), Expect = 0.86 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = +1 Query: 103 NQDLEEKLYNSILTGDYDSAVRQSLE 180 + DLE+ + ++LTGD SAV+ LE Sbjct: 551 DSDLEKNITEALLTGDVLSAVKACLE 576 >SPBC31E1.01c |atg2|mug36, SPBC660.18c|autophagy associated protein Mug36|Schizosaccharomyces pombe|chr 2|||Manual Length = 1646 Score = 25.4 bits (53), Expect = 2.6 Identities = 14/47 (29%), Positives = 23/47 (48%) Frame = +1 Query: 40 EFAMCMLAVSAGVVELSADTSNQDLEEKLYNSILTGDYDSAVRQSLE 180 E A L + VVE T++QD E+++ N L + D + L+ Sbjct: 129 EDAPSQLDILDNVVEYMNKTASQDFEDEVINEGLESEIDGSSHNLLD 175 >SPAC23E2.03c |ste7||meiotic suppressor protein Ste7|Schizosaccharomyces pombe|chr 1|||Manual Length = 569 Score = 25.4 bits (53), Expect = 2.6 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 2/51 (3%) Frame = +2 Query: 5 SERLLTK*NSSKNLRCACSPSARASLN--YPRTLLTKTSRRNCTTASSPAT 151 SE L T + N CA SPS R+S N Y TL R N + S ++ Sbjct: 483 SESLPTAEDQVHNNHCAVSPSRRSSSNALYLATLPMGYERSNSVSYCSDSS 533 >SPAC1486.10 |thi1|ntf1, SPAC6G10.01|transcription factor Thi1|Schizosaccharomyces pombe|chr 1|||Manual Length = 775 Score = 25.4 bits (53), Expect = 2.6 Identities = 13/37 (35%), Positives = 19/37 (51%) Frame = +2 Query: 68 ARASLNYPRTLLTKTSRRNCTTASSPATTTVLSGRAW 178 AR SLNY ++ + SRRN ++P S + W Sbjct: 622 ARESLNYLKSFNKQLSRRNAPDINNPIADFQNSFQNW 658 >SPCC1795.09 |yps1||aspartic protease Yps1|Schizosaccharomyces pombe|chr 3|||Manual Length = 521 Score = 25.4 bits (53), Expect = 2.6 Identities = 15/44 (34%), Positives = 24/44 (54%) Frame = -1 Query: 134 LLYSFSSRSWLEVSADSSTTPALTASMHIANSSRSFILLGAFQI 3 ++YS++S S + SA S +L + +AN+ SF L A I Sbjct: 465 VVYSYTSSSSMPSSAIPSFNISLISQNAVANAGNSFSPLSAMVI 508 >SPAC22F8.11 |plc1||phosphoinositide phospholipase C Plc1|Schizosaccharomyces pombe|chr 1|||Manual Length = 899 Score = 25.4 bits (53), Expect = 2.6 Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 1/25 (4%) Frame = -3 Query: 72 RADGEHAHRKFFEEF-HFVRSLSDR 1 +AD +H+ + FEEF HFV L R Sbjct: 341 KADADHSGKLSFEEFQHFVSLLKTR 365 >SPBC3D6.03c |||tRNA endonuclease |Schizosaccharomyces pombe|chr 2|||Manual Length = 678 Score = 25.0 bits (52), Expect = 3.5 Identities = 16/46 (34%), Positives = 22/46 (47%) Frame = -1 Query: 251 FRLLSMIXLLTTFWMMEPLPWLSYSKLCRTALS*SPVRMLLYSFSS 114 F L + T+ + P P +S K S SP+R+ L SFSS Sbjct: 121 FGYLQSSGIQNTWGLHAPKPVISIIKKSHHLFSGSPLRLDLNSFSS 166 >SPAC23H3.04 |||conserved fungal protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 300 Score = 25.0 bits (52), Expect = 3.5 Identities = 11/18 (61%), Positives = 15/18 (83%) Frame = -3 Query: 156 VVVAGEDAVVQFLLEVLV 103 V+V EDAVV+F+L +LV Sbjct: 189 VMVLPEDAVVEFVLTILV 206 >SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr 1|||Manual Length = 1158 Score = 24.6 bits (51), Expect = 4.6 Identities = 13/32 (40%), Positives = 23/32 (71%) Frame = -1 Query: 119 SSRSWLEVSADSSTTPALTASMHIANSSRSFI 24 +S S+ V +DSSTTP +++S+ + +S +FI Sbjct: 318 TSDSFDSVLSDSSTTPTISSSVQV--NSLAFI 347 >SPBC2F12.03c |||EST1 family protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 891 Score = 24.2 bits (50), Expect = 6.1 Identities = 14/37 (37%), Positives = 18/37 (48%) Frame = -1 Query: 128 YSFSSRSWLEVSADSSTTPALTASMHIANSSRSFILL 18 YS S S + S T+P L+ + IAN S S L Sbjct: 729 YSLMSSSSFPSAQSSPTSPFLSGTPSIANQSSSIASL 765 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 1,318,233 Number of Sequences: 5004 Number of extensions: 22443 Number of successful extensions: 63 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 62 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 63 length of database: 2,362,478 effective HSP length: 65 effective length of database: 2,037,218 effective search space used: 107972554 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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