Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20151
         (356 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK128082-1|BAC87263.1|  236|Homo sapiens protein ( Homo sapiens ...    29   5.6  
AF053356-12|AAC78793.1|  832|Homo sapiens leucin rich neuronal p...    28   7.4  
BC026094-1|AAH26094.1|  407|Homo sapiens C20orf94 protein protein.     28   9.8  
BC020787-1|AAH20787.1|  408|Homo sapiens C20orf94 protein protein.     28   9.8  
AL353599-1|CAH71745.1|  408|Homo sapiens chromosome 20 open read...    28   9.8  
AL133340-1|CAH71244.1|  408|Homo sapiens chromosome 20 open read...    28   9.8  
AL035456-2|CAI42184.1|  408|Homo sapiens chromosome 20 open read...    28   9.8  

>AK128082-1|BAC87263.1|  236|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46203 fis, clone TESTI4008305. ).
          Length = 236

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +2

Query: 77  SLNYPRTLLTKTSRRNCTTASSPATTTVLSGRAWNMRA 190
           S++ PR+L+++ SRR    + S +T   +S   W  RA
Sbjct: 58  SMSRPRSLMSRRSRRTRRMSESVSTKIFMSRSWWRQRA 95


>AF053356-12|AAC78793.1|  832|Homo sapiens leucin rich neuronal
           protein protein.
          Length = 832

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
 Frame = +3

Query: 105 PRPRGETVQQHPHRRLRQCCPAELG--I*EPRQGLHHP 212
           P PRG TV Q P  +  +C     G  + +PR G+  P
Sbjct: 745 PHPRGPTVAQEPRSQAGRCVTPHSGRCMKQPRAGVSGP 782


>BC026094-1|AAH26094.1|  407|Homo sapiens C20orf94 protein protein.
          Length = 407

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +2

Query: 35  SKNLRCACSPSARASLNYPRTLLTKTSRRNCTTA 136
           S++  C+C  ++      PR   T+  RRNC++A
Sbjct: 269 SRSPVCSCESASPCPKQSPRVAKTQQKRRNCSSA 302


>BC020787-1|AAH20787.1|  408|Homo sapiens C20orf94 protein protein.
          Length = 408

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +2

Query: 35  SKNLRCACSPSARASLNYPRTLLTKTSRRNCTTA 136
           S++  C+C  ++      PR   T+  RRNC++A
Sbjct: 269 SRSPVCSCESASPCPKQSPRVAKTQQKRRNCSSA 302


>AL353599-1|CAH71745.1|  408|Homo sapiens chromosome 20 open reading
           frame 94 protein.
          Length = 408

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +2

Query: 35  SKNLRCACSPSARASLNYPRTLLTKTSRRNCTTA 136
           S++  C+C  ++      PR   T+  RRNC++A
Sbjct: 269 SRSPVCSCESASPCPKQSPRVAKTQQKRRNCSSA 302


>AL133340-1|CAH71244.1|  408|Homo sapiens chromosome 20 open reading
           frame 94 protein.
          Length = 408

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +2

Query: 35  SKNLRCACSPSARASLNYPRTLLTKTSRRNCTTA 136
           S++  C+C  ++      PR   T+  RRNC++A
Sbjct: 269 SRSPVCSCESASPCPKQSPRVAKTQQKRRNCSSA 302


>AL035456-2|CAI42184.1|  408|Homo sapiens chromosome 20 open reading
           frame 94 protein.
          Length = 408

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +2

Query: 35  SKNLRCACSPSARASLNYPRTLLTKTSRRNCTTA 136
           S++  C+C  ++      PR   T+  RRNC++A
Sbjct: 269 SRSPVCSCESASPCPKQSPRVAKTQQKRRNCSSA 302


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,931,641
Number of Sequences: 237096
Number of extensions: 900618
Number of successful extensions: 6308
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5844
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6303
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2133208582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)