Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20150
         (457 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY330182-1|AAQ16288.1|  181|Anopheles gambiae odorant-binding pr...    25   1.7  
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              23   6.7  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   6.7  

>AY330182-1|AAQ16288.1|  181|Anopheles gambiae odorant-binding
           protein AgamOBP56 protein.
          Length = 181

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 8/45 (17%), Positives = 24/45 (53%)
 Frame = +1

Query: 163 TDLRGQEERSHHKCRKQTHTKQQDELHGVRLQLWMQGSKDIVREC 297
           ++++  + +  +KC    +T+  +++H ++ Q +M+       EC
Sbjct: 22  SEVQDDKCKRKYKCCNDANTENMEKIHEIKKQCFMEMEVICAMEC 66


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 22.6 bits (46), Expect = 6.7
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 387 QQQRWQTCLRRWQGQRRVQKS 449
           QQ+ W T +RR Q  ++ Q+S
Sbjct: 306 QQELWTTVVRRRQNTQQQQQS 326


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 22.6 bits (46), Expect = 6.7
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 178 QEERSHHKCRKQTHT 222
           +EE+ H +C KQ+ T
Sbjct: 483 REEKHHERCAKQSET 497


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 387,878
Number of Sequences: 2352
Number of extensions: 6098
Number of successful extensions: 42
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39119412
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)