Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20150
(457 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74030-16|CAI79165.1| 481|Caenorhabditis elegans Hypothetical p... 29 1.2
Z74030-15|CAI79164.1| 477|Caenorhabditis elegans Hypothetical p... 29 1.2
Z74030-7|CAA98447.2| 559|Caenorhabditis elegans Hypothetical pr... 29 1.2
Z74030-6|CAA98444.2| 508|Caenorhabditis elegans Hypothetical pr... 29 1.2
Z70311-3|CAA94372.1| 546|Caenorhabditis elegans Hypothetical pr... 29 1.2
Z70682-6|CAH60781.2| 401|Caenorhabditis elegans Hypothetical pr... 29 1.6
U22831-4|AAK20066.1| 633|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z66561-1|CAA91454.1| 635|Caenorhabditis elegans Hypothetical pr... 29 2.1
U80848-1|AAB37990.3| 389|Caenorhabditis elegans Hypothetical pr... 28 2.8
Z81046-4|CAB02825.1| 278|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z70034-14|CAC44294.1| 356|Caenorhabditis elegans Hypothetical p... 28 3.7
Z70034-13|CAC44293.1| 350|Caenorhabditis elegans Hypothetical p... 28 3.7
Z49910-11|CAC44292.1| 356|Caenorhabditis elegans Hypothetical p... 28 3.7
Z49910-10|CAC44291.1| 350|Caenorhabditis elegans Hypothetical p... 28 3.7
Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical pr... 28 3.7
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 28 3.7
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 28 3.7
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z75530-8|CAA99792.2| 405|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical p... 27 8.6
U49947-7|AAA93425.2| 382|Caenorhabditis elegans Hypothetical pr... 27 8.6
U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical pr... 27 8.6
U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin pro... 27 8.6
L12018-1|AAA65458.1| 518|Caenorhabditis elegans Polk (dna polym... 27 8.6
>Z74030-16|CAI79165.1| 481|Caenorhabditis elegans Hypothetical
protein D1054.9e protein.
Length = 481
Score = 29.5 bits (63), Expect = 1.2
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = +3
Query: 66 MPTEPQSPTPNSKTIFTTASSLPI----TTMPLKKANRSTRTRRAKSSQMS*TNSYETTR 233
+PTEP + +S T +T LPI + +A+ ST T A+ S + T + TT
Sbjct: 235 IPTEPSTSVSSSSTSASTTPELPIIEETEEREVTEASTSTTTTTAEPSTTATTTTTTTTE 294
Query: 234 *TAWSTPPALDARLQGYRPGVL 299
+T + +L G P L
Sbjct: 295 -EPTTTTKGSEEQLGGKGPSPL 315
>Z74030-15|CAI79164.1| 477|Caenorhabditis elegans Hypothetical
protein D1054.9d protein.
Length = 477
Score = 29.5 bits (63), Expect = 1.2
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = +3
Query: 66 MPTEPQSPTPNSKTIFTTASSLPI----TTMPLKKANRSTRTRRAKSSQMS*TNSYETTR 233
+PTEP + +S T +T LPI + +A+ ST T A+ S + T + TT
Sbjct: 235 IPTEPSTSVSSSSTSASTTPELPIIEETEEREVTEASTSTTTTTAEPSTTATTTTTTTTE 294
Query: 234 *TAWSTPPALDARLQGYRPGVL 299
+T + +L G P L
Sbjct: 295 -EPTTTTKGSEEQLGGKGPSPL 315
>Z74030-7|CAA98447.2| 559|Caenorhabditis elegans Hypothetical
protein D1054.9b protein.
Length = 559
Score = 29.5 bits (63), Expect = 1.2
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = +3
Query: 66 MPTEPQSPTPNSKTIFTTASSLPI----TTMPLKKANRSTRTRRAKSSQMS*TNSYETTR 233
+PTEP + +S T +T LPI + +A+ ST T A+ S + T + TT
Sbjct: 235 IPTEPSTSVSSSSTSASTTPELPIIEETEEREVTEASTSTTTTTAEPSTTATTTTTTTTE 294
Query: 234 *TAWSTPPALDARLQGYRPGVL 299
+T + +L G P L
Sbjct: 295 -EPTTTTKGSEEQLGGKGPSPL 315
>Z74030-6|CAA98444.2| 508|Caenorhabditis elegans Hypothetical
protein D1054.9a protein.
Length = 508
Score = 29.5 bits (63), Expect = 1.2
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = +3
Query: 66 MPTEPQSPTPNSKTIFTTASSLPI----TTMPLKKANRSTRTRRAKSSQMS*TNSYETTR 233
+PTEP + +S T +T LPI + +A+ ST T A+ S + T + TT
Sbjct: 235 IPTEPSTSVSSSSTSASTTPELPIIEETEEREVTEASTSTTTTTAEPSTTATTTTTTTTE 294
Query: 234 *TAWSTPPALDARLQGYRPGVL 299
+T + +L G P L
Sbjct: 295 -EPTTTTKGSEEQLGGKGPSPL 315
>Z70311-3|CAA94372.1| 546|Caenorhabditis elegans Hypothetical
protein T25B9.4 protein.
Length = 546
Score = 29.5 bits (63), Expect = 1.2
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = +3
Query: 87 PTPNSKTIFTTASSLPITTMPLKKANRSTRTRRAKSSQMS*TNSYETTR*TAWSTPPA 260
P P + T+ S PIT K +R + +R K ++ TT T S PPA
Sbjct: 434 PPPETATVALPNSLPPITVSARSKNSRKSTLKRKKKKTSKDSSMTTTTTNTNESEPPA 491
>Z70682-6|CAH60781.2| 401|Caenorhabditis elegans Hypothetical
protein F08G5.7 protein.
Length = 401
Score = 29.1 bits (62), Expect = 1.6
Identities = 17/68 (25%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +3
Query: 33 KLFCVFSXRXYMPTEPQSPTPN-SKTIFTTASSLPITTMPLKKANRSTRTRRAKSSQMS* 209
++ C + R T +PT + TI T+ +++ TT+ KA +T+T + ++
Sbjct: 195 QIICKYCPRETTSTTTVTPTTTKAATIKTSTTTVTPTTVTTTKAPTTTKTSTSTTTPKFT 254
Query: 210 TNSYETTR 233
T + +TT+
Sbjct: 255 TTTIQTTK 262
>U22831-4|AAK20066.1| 633|Caenorhabditis elegans Hypothetical
protein F47D12.5 protein.
Length = 633
Score = 29.1 bits (62), Expect = 1.6
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +1
Query: 274 SKDIVRECFPVEFTLIFAENNIKLMYKRDGLALTLRDDSNNDGRLAY 414
+ ++RECFP +I + +Y ++G+ + DS DG L +
Sbjct: 543 ANSLIRECFPEISNVIKIPVSDSKIYVKNGILKKILKDSREDGSLLW 589
>Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical
protein F15D4.4 protein.
Length = 608
Score = 28.7 bits (61), Expect = 2.1
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +3
Query: 69 PTEPQSPTPNSKTIFTTASSLPITT---MPLKKANRSTRTRRAKSSQMS*TNSYETTR 233
PT Q+ TP + TI TT +P TT PL+K N + A S M N T +
Sbjct: 94 PTSTQTTTPTTTTITTT--PVPTTTPYLSPLEKFNEAMNNDGAFKSLMDVINFNSTAK 149
>Z66561-1|CAA91454.1| 635|Caenorhabditis elegans Hypothetical
protein F08G12.1 protein.
Length = 635
Score = 28.7 bits (61), Expect = 2.1
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +2
Query: 62 LYANGTSVSDSKLEDDLYNSILVADYDNAVE---KSKQIYEDKKSEV 193
L N + + S E D Y ADYD +E + ++ Y DKKSE+
Sbjct: 253 LETNKSEIVSSYHELDCYQETPEADYDTFIELVNQKRREYADKKSEM 299
>U80848-1|AAB37990.3| 389|Caenorhabditis elegans Hypothetical
protein T10H10.3 protein.
Length = 389
Score = 28.3 bits (60), Expect = 2.8
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = +2
Query: 62 LYANGTSVSDSKLEDDLYNSILVADYDNAVEK--SKQIYE-DKKSEVITNVVNKLIRNNK 232
+YA S D LE DL+N + +Y++ + K +++++ KK E NV+N+ I
Sbjct: 318 MYAQSDSSLDHLLEWDLFNFEQLTEYEHLMMKLYKQEVFDIVKKYEKKRNVLNREIHRRD 377
Query: 233 MN 238
++
Sbjct: 378 VS 379
>Z81046-4|CAB02825.1| 278|Caenorhabditis elegans Hypothetical
protein C37E2.5 protein.
Length = 278
Score = 27.9 bits (59), Expect = 3.7
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 69 PTEPQSPTPNSKTIFTTASSLPITTMPLKKAN 164
PT + TP+S + T SSLP T+ L N
Sbjct: 206 PTADNASTPSSSSSITATSSLPTTSSSLSVYN 237
>Z70034-14|CAC44294.1| 356|Caenorhabditis elegans Hypothetical
protein C18E9.11b protein.
Length = 356
Score = 27.9 bits (59), Expect = 3.7
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -2
Query: 300 EALPDDILGALHPELEAYSMQFILLFRMSLF 208
+ LP+ +LGA+ P L+ YS + FR S+F
Sbjct: 181 DKLPEQLLGAIKPFLDYYSTISGVDFRRSIF 211
>Z70034-13|CAC44293.1| 350|Caenorhabditis elegans Hypothetical
protein C18E9.11a protein.
Length = 350
Score = 27.9 bits (59), Expect = 3.7
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -2
Query: 300 EALPDDILGALHPELEAYSMQFILLFRMSLF 208
+ LP+ +LGA+ P L+ YS + FR S+F
Sbjct: 175 DKLPEQLLGAIKPFLDYYSTISGVDFRRSIF 205
>Z49910-11|CAC44292.1| 356|Caenorhabditis elegans Hypothetical
protein C18E9.11b protein.
Length = 356
Score = 27.9 bits (59), Expect = 3.7
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -2
Query: 300 EALPDDILGALHPELEAYSMQFILLFRMSLF 208
+ LP+ +LGA+ P L+ YS + FR S+F
Sbjct: 181 DKLPEQLLGAIKPFLDYYSTISGVDFRRSIF 211
>Z49910-10|CAC44291.1| 350|Caenorhabditis elegans Hypothetical
protein C18E9.11a protein.
Length = 350
Score = 27.9 bits (59), Expect = 3.7
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -2
Query: 300 EALPDDILGALHPELEAYSMQFILLFRMSLF 208
+ LP+ +LGA+ P L+ YS + FR S+F
Sbjct: 175 DKLPEQLLGAIKPFLDYYSTISGVDFRRSIF 205
>Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical
protein R07E3.6 protein.
Length = 927
Score = 27.9 bits (59), Expect = 3.7
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 78 PQSPTPNSKTIFTTAS-SLPITTMPLKKANRSTRTR 182
PQ P P +T T +LP TT+P+ N++ RT+
Sbjct: 762 PQVPLPVVQTTQTAPKPTLPPTTLPVLTTNKTPRTK 797
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 27.9 bits (59), Expect = 3.7
Identities = 11/36 (30%), Positives = 23/36 (63%)
Frame = +2
Query: 140 DNAVEKSKQIYEDKKSEVITNVVNKLIRNNKMNCME 247
+NA E SKQ+Y D K+ +++N ++ + + M ++
Sbjct: 51 ENAQEFSKQLYHDLKNSILSNADDERLYKDIMTYLQ 86
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 27.9 bits (59), Expect = 3.7
Identities = 11/36 (30%), Positives = 23/36 (63%)
Frame = +2
Query: 140 DNAVEKSKQIYEDKKSEVITNVVNKLIRNNKMNCME 247
+NA E SKQ+Y D K+ +++N ++ + + M ++
Sbjct: 51 ENAQEFSKQLYHDLKNSILSNADDERLYKDIMTYLQ 86
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical
protein W01F3.3 protein.
Length = 2175
Score = 27.5 bits (58), Expect = 4.9
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 45 VFSXRXYMPTEPQSPTPNSKTIFTTASSLPITTMPLK 155
V + R +PT P+ P +T T AS L T +P+K
Sbjct: 647 VSTQRAPVPTTPRPTAPAVQTTTTRASRLETTRVPVK 683
>Z75530-8|CAA99792.2| 405|Caenorhabditis elegans Hypothetical
protein C47E8.3 protein.
Length = 405
Score = 27.1 bits (57), Expect = 6.5
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +1
Query: 202 CRKQTHTKQQDELHGVRLQLWMQGSK 279
C + HT D LHG+R+ M SK
Sbjct: 329 CNRLIHTASVDTLHGMRITCLMGNSK 354
>Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical
protein F33A8.1 protein.
Length = 897
Score = 26.6 bits (56), Expect = 8.6
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +2
Query: 98 LED--DLYNSILVADYDNAVEKSKQIYEDKKSEVITN 202
LED D N + V D EK++++YE+ + E+I N
Sbjct: 408 LEDAVDPENGLNVFKLDPEFEKNEEVYEEIRKEIIGN 444
>Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical
protein C30H6.4 protein.
Length = 476
Score = 26.6 bits (56), Expect = 8.6
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = +3
Query: 72 TEPQSPTPNSKTIFTTASSLPITTMPLKKANRSTRTRRAKSSQMS*TNSYETTR*TAWST 251
T+P + TP + T T S+ TT + T T +++ + + S TT T +T
Sbjct: 258 TKPTTTTPTTTTTTTIPSTTSSTTSTSTTTSVVTTTTVTSTTEPTTSTSTPTTTTTMQTT 317
Query: 252 PPA 260
P+
Sbjct: 318 TPS 320
>U49947-7|AAA93425.2| 382|Caenorhabditis elegans Hypothetical
protein C30G4.6 protein.
Length = 382
Score = 26.6 bits (56), Expect = 8.6
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 6/40 (15%)
Frame = +1
Query: 334 NIKLMYKRDGLALTLRDD------SNNDGRLAYGDGKDKD 435
++K +KRDGL LT+RD+ + N L YG D D
Sbjct: 55 SLKTNFKRDGLYLTVRDNPKLCMTTQNLDNLFYGLSLDSD 94
>U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical protein
F40H6.5 protein.
Length = 1288
Score = 26.6 bits (56), Expect = 8.6
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +3
Query: 69 PTEPQSPTPNSKTIFTTASSLPITTMPLKKANRSTRTR 182
PT S T + TT S+LP T+ + + STR R
Sbjct: 1156 PTTTTSTTTTTTPKLTTTSTLPSTSTAIATTDVSTRPR 1193
>U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin
protein.
Length = 897
Score = 26.6 bits (56), Expect = 8.6
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +2
Query: 98 LED--DLYNSILVADYDNAVEKSKQIYEDKKSEVITN 202
LED D N + V D EK++++YE+ + E+I N
Sbjct: 408 LEDAVDPENGLNVFKLDPEFEKNEEVYEEIRKEIIGN 444
>L12018-1|AAA65458.1| 518|Caenorhabditis elegans Polk (dna
polymerase kappa) homologprotein 1 protein.
Length = 518
Score = 26.6 bits (56), Expect = 8.6
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = +1
Query: 172 RGQEERSHHKCRKQTHTK---QQDELHGVRLQLWMQGSKDIVRECFPVEFTLIFA 327
R +E+ K R QT T+ Q+ E+ L++ ++ S+D+ R+C ++ FA
Sbjct: 41 RIEEKVLEIKNRLQTATREERQKSEILMENLEMKLESSRDLSRDCVCIDMDAYFA 95
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,792,755
Number of Sequences: 27780
Number of extensions: 152775
Number of successful extensions: 663
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 663
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 809909048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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