Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20150
         (457 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   1.6  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   1.6  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   2.7  
DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              21   6.3  
AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    21   6.3  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    21   8.4  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    21   8.4  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    21   8.4  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   8.4  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   8.4  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 24   KPFKLFCVFSXRXYMPTEPQSP 89
            +P  +F   +   YMP+EP++P
Sbjct: 946  EPLYVFVRSAPNFYMPSEPKAP 967


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 16/68 (23%), Positives = 30/68 (44%)
 Frame = +3

Query: 243  WSTPPALDARLQGYRPGVLPC*VHTYFRRKQH*ADVQARRSCFDVAR*QQQRWQTCLRRW 422
            W+ PP + +      P V       YF   +     + +R+   V + QQQ+ Q   ++ 
Sbjct: 1164 WNPPPFMPSPFMAGAPNVPTILPEQYFATSRIRGLQEQQRNAAMVQQQQQQQQQQQQQQQ 1223

Query: 423  QGQRRVQK 446
            Q Q++ Q+
Sbjct: 1224 QQQQQQQQ 1231


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 8/30 (26%), Positives = 18/30 (60%)
 Frame = +3

Query: 90  TPNSKTIFTTASSLPITTMPLKKANRSTRT 179
           TP +  I  + +++PIT++P    + ++ T
Sbjct: 841 TPTTSVISMSGTTVPITSLPASSTSINSIT 870


>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = +2

Query: 173 EDKKSEVITNVVNKLIRNNKMNCMEYASSSGCK 271
           E+K  E  T + ++ +     NC +   S+ CK
Sbjct: 81  EEKFRERTTKLDSEQVNRLVNNCKDITESNSCK 113


>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 220 TKQQDELHGVRLQLWMQGSKDIVR 291
           TK+Q+ L    ++ W++  K IVR
Sbjct: 92  TKKQEMLVRSAIKYWVERHKHIVR 115


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +3

Query: 63  YMPTEPQSPTPNSKTI 110
           Y P E  SP P+  T+
Sbjct: 123 YFPNEEYSPDPSDSTM 138


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +1

Query: 178 QEERSHHKCRKQTHTKQQDELH 243
           QEER   K R Q+  +    LH
Sbjct: 181 QEERQRTKERDQSEVESTSSLH 202


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +1

Query: 178 QEERSHHKCRKQTHTKQQDELH 243
           QEER   K R Q+  +    LH
Sbjct: 181 QEERQRTKERDQSEVESTSSLH 202


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -1

Query: 289 GRYPWSLASRAGGVLHAVHLVV 224
           G Y     +RAG V HA  L V
Sbjct: 495 GEYSCMAENRAGKVTHAARLNV 516


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -1

Query: 289 GRYPWSLASRAGGVLHAVHLVV 224
           G Y     +RAG V HA  L V
Sbjct: 495 GEYSCMAENRAGKVTHAARLNV 516


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,481
Number of Sequences: 438
Number of extensions: 1658
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12066642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)