Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20147
         (436 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    23   1.3  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   2.9  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   3.8  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   3.8  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   3.8  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   6.7  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   6.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   6.7  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   6.7  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    20   8.9  

>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +1

Query: 97  DSMDPIVLLDKVFKNQEICMILDQIIKVLNMDLESESVRT 216
           DS+ PI +L    KN+++ + L+ I K+  + L     RT
Sbjct: 10  DSLYPIAVLIDELKNEDVQLRLNSIKKLSTIALALGVERT 49


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = +3

Query: 204 IGPNGLQGPTGQYRPGSPEVKMLYQALEDNMVVLELN 314
           +  NG  GP   Y P   +  + Y  +    VVLE++
Sbjct: 292 LAKNGAYGPDMIYTPEDVKALVEYARIRGIRVVLEVD 328


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +3

Query: 141 PGNMYDSRPNNQSPQYGPGIGIGPNGLQGPT 233
           P  M+     + +P   PG G G  GLQ PT
Sbjct: 373 PETMHMGMGPSLTPLASPGCGPGQGGLQ-PT 402


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +3

Query: 90  PSGQYGPDSAVG 125
           PSG Y PD  +G
Sbjct: 411 PSGAYSPDGTMG 422



 Score = 21.0 bits (42), Expect = 5.1
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = +3

Query: 3   PGXQYGGGQSRNQEPGGQYAPGNQNIMQRP 92
           PG   GG  +   EP   + PG Q +   P
Sbjct: 14  PGYMDGGAGAGLYEPHVAHRPGLQGLHHSP 43


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +3

Query: 141 PGNMYDSRPNNQSPQYGPGIGIGPNGLQGPT 233
           P  M+     + +P   PG G G  GLQ PT
Sbjct: 373 PETMHMGMGPSLTPLASPGCGPGQGGLQ-PT 402


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 5/18 (27%), Positives = 12/18 (66%)
 Frame = -3

Query: 341 EFHFDHLDHIEFQNHHIV 288
           + HFD + + +F+N  ++
Sbjct: 4   KLHFDEMSYSQFENQAVL 21


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 170 IWSRIIHISWFLNTLSNST 114
           ++SR  + SW  NT+S +T
Sbjct: 156 VYSRHPYESWPFNTMSGAT 174


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -2

Query: 150 YFLVLEYLVQQHYRVHTVHLAFA*C 76
           +FL+  Y     + + TVHL F  C
Sbjct: 141 FFLLCIYYFYCAFIIFTVHLLFLLC 165


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +3

Query: 18  GGGQSRNQEPGG 53
           G G   NQ PGG
Sbjct: 528 GSGSGNNQPPGG 539


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 7/27 (25%), Positives = 13/27 (48%)
 Frame = +1

Query: 217 DYKGQLVSIGLDLRRSKCCIRPWRTIW 297
           +Y GQ      D++     I+ +R +W
Sbjct: 146 EYPGQRGGAAADIQNYATLIKEFREVW 172


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,810
Number of Sequences: 336
Number of extensions: 2039
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9670396
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)