Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20147
(436 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49500| Best HMM Match : Collagen (HMM E-Value=1.8e-07) 44 4e-05
SB_59302| Best HMM Match : Collagen (HMM E-Value=0) 39 0.002
SB_36007| Best HMM Match : Collagen (HMM E-Value=9e-25) 38 0.005
SB_12339| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_35558| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_26644| Best HMM Match : Collagen (HMM E-Value=0) 37 0.006
SB_29069| Best HMM Match : Furin-like (HMM E-Value=0.042) 36 0.011
SB_35402| Best HMM Match : Collagen (HMM E-Value=0.39) 35 0.033
SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.044
SB_15904| Best HMM Match : Collagen (HMM E-Value=4.1e-11) 33 0.10
SB_25350| Best HMM Match : Collagen (HMM E-Value=0) 33 0.13
SB_21646| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.13
SB_53344| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.18
SB_13207| Best HMM Match : Extensin_2 (HMM E-Value=0.061) 32 0.18
SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.41
SB_3936| Best HMM Match : Collagen (HMM E-Value=7.5e-24) 31 0.41
SB_46131| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.72
SB_30003| Best HMM Match : DUF906 (HMM E-Value=0) 30 0.72
SB_27478| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.72
SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11) 30 0.72
SB_23501| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.95
SB_7530| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.95
SB_55304| Best HMM Match : Collagen (HMM E-Value=0.11) 29 1.3
SB_38313| Best HMM Match : XYPPX (HMM E-Value=0.069) 29 1.3
SB_14625| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.056) 29 1.3
SB_17317| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.3
SB_17315| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_53730| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.9
SB_31319| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.9
SB_6496| Best HMM Match : Collagen (HMM E-Value=0) 28 2.9
SB_53717| Best HMM Match : Furin-like (HMM E-Value=0.05) 28 3.8
SB_15585| Best HMM Match : Collagen (HMM E-Value=2.7e-12) 28 3.8
SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_13124| Best HMM Match : Collagen (HMM E-Value=2.3e-11) 28 3.8
SB_31570| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.0
SB_9366| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.0
SB_8802| Best HMM Match : WW (HMM E-Value=3.2e-31) 27 5.0
SB_34344| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.0
SB_37690| Best HMM Match : IgG_binding_B (HMM E-Value=4.2) 27 6.7
SB_9863| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_51687| Best HMM Match : EMP70 (HMM E-Value=0) 27 6.7
SB_36462| Best HMM Match : efhand (HMM E-Value=5.8e-09) 27 6.7
SB_26832| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_47949| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 27 8.8
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_2570| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_1489| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.77) 27 8.8
SB_26266| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 27 8.8
SB_22789| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_21574| Best HMM Match : T-box (HMM E-Value=0) 27 8.8
>SB_49500| Best HMM Match : Collagen (HMM E-Value=1.8e-07)
Length = 621
Score = 44.4 bits (100), Expect = 4e-05
Identities = 28/82 (34%), Positives = 34/82 (41%), Gaps = 2/82 (2%)
Frame = +3
Query: 21 GGQSRNQEPGGQYAPGNQNIMQRPSGQYGPDSAVG-QGIQEP-GNMYDSRPNNQSPQYGP 194
G +PG P N Q P+G GP+ G G Q P G + P S GP
Sbjct: 19 GTSGTESQPGSGQRPQGPNGPQGPNGPQGPNGPQGPNGPQGPNGPQGPNGPQGPSGPQGP 78
Query: 195 GIGIGPNGLQGPTGQYRPGSPE 260
PNG QGP+G P P+
Sbjct: 79 SGPQVPNGPQGPSGPQGPNGPQ 100
Score = 39.9 bits (89), Expect = 9e-04
Identities = 31/85 (36%), Positives = 38/85 (44%), Gaps = 3/85 (3%)
Frame = +3
Query: 15 YGGGQSR--NQEPGGQYAPGNQNIMQRPSGQYGPDSAVG-QGIQEPGNMYDSRPNNQSPQ 185
Y GG N G + PG+ Q P+G GP+ G G Q P PN PQ
Sbjct: 9 YTGGLETPINGTSGTESQPGSGQRPQGPNGPQGPNGPQGPNGPQGPNG--PQGPNG--PQ 64
Query: 186 YGPGIGIGPNGLQGPTGQYRPGSPE 260
GP GP+G QGP+G P P+
Sbjct: 65 -GPNGPQGPSGPQGPSGPQVPNGPQ 88
Score = 39.1 bits (87), Expect = 0.002
Identities = 24/73 (32%), Positives = 28/73 (38%)
Frame = +3
Query: 39 QEPGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNG 218
Q P G P N Q P+G GP+ G + N Q P GP + GP G
Sbjct: 31 QRPQGPNGPQGPNGPQGPNGPQGPNGPQGPNGPQGPNGPQGPSGPQGPS-GPQVPNGPQG 89
Query: 219 LQGPTGQYRPGSP 257
GP G P P
Sbjct: 90 PSGPQGPNGPQGP 102
Score = 30.7 bits (66), Expect = 0.54
Identities = 28/75 (37%), Positives = 29/75 (38%)
Frame = +3
Query: 6 GXQYGGGQSRNQEPGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQ 185
G Q G P G P N Q P+G GP G Q P PN PQ
Sbjct: 38 GPQGPNGPQGPNGPQGPNGPQGPNGPQGPNGPQGP-----SGPQGPSG--PQVPN--GPQ 88
Query: 186 YGPGIGIGPNGLQGP 230
GP GPNG QGP
Sbjct: 89 -GPSGPQGPNGPQGP 102
>SB_59302| Best HMM Match : Collagen (HMM E-Value=0)
Length = 993
Score = 38.7 bits (86), Expect = 0.002
Identities = 25/70 (35%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGPDSAVG-QGIQ-EPGNMYDSRPNNQSPQYGPGIGIGPNG 218
PG PG Q P+G GP G G+ PG + D P GP + GP G
Sbjct: 69 PGPPGPPGFQGPPGNPAGAIGPPGLPGPNGVNGPPGELGDMGPPGPPGPPGPQMPPGPPG 128
Query: 219 LQGPTGQYRP 248
L GP G P
Sbjct: 129 LPGPPGPAGP 138
Score = 36.3 bits (80), Expect = 0.011
Identities = 32/89 (35%), Positives = 33/89 (37%), Gaps = 4/89 (4%)
Frame = +3
Query: 3 PGXQYGGGQSRN-QEPGGQYAPGNQNIMQRPSGQYGPDSAVG-QGIQEPGNMYDSRPNNQ 176
PG Q G Q P GQ P N P G GP G G Q P P
Sbjct: 415 PGYQGNHGNPAGPQGPNGQPGPPGINGPPGPLGDVGPPGLPGPPGPQMPPGP-PGLPGAP 473
Query: 177 SPQYGPGIG--IGPNGLQGPTGQYRPGSP 257
P PGI +GP G GP G PG P
Sbjct: 474 GPNGPPGINGPLGPPGEAGPPG--NPGGP 500
Score = 35.9 bits (79), Expect = 0.014
Identities = 23/79 (29%), Positives = 27/79 (34%)
Frame = +3
Query: 3 PGXQYGGGQSRNQEPGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSP 182
PG G + P G P N P+G GP G G N +
Sbjct: 707 PGLPGPPGPASPPSPPGPPGPPGPNGPPGPNGPLGPPGECGPAGNAGGVGCQGHHGNPAG 766
Query: 183 QYGPGIGIGPNGLQGPTGQ 239
GP GP G+ GP GQ
Sbjct: 767 SQGPNGQPGPPGINGPPGQ 785
Score = 35.5 bits (78), Expect = 0.019
Identities = 31/85 (36%), Positives = 33/85 (38%)
Frame = +3
Query: 3 PGXQYGGGQSRNQEPGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSP 182
PG Q G Q PG APG + P G GP G + PGN P Q
Sbjct: 200 PGPQ--GPQMPPGPPGLPGAPGPKG----PPGTNGPLGPPGD-VGPPGN--PGGPGYQGN 250
Query: 183 QYGPGIGIGPNGLQGPTGQYRPGSP 257
P GPNGL GP G P P
Sbjct: 251 HGNPAGPQGPNGLPGPNGILGPPGP 275
Score = 34.7 bits (76), Expect = 0.033
Identities = 32/80 (40%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGP-DSAVGQGIQ-EPGNMYDSR-PNNQSPQYG----PG-I 200
P G P N P G+ GP +A G G Q GN S+ PN Q G PG +
Sbjct: 727 PPGPNGPPGPNGPLGPPGECGPAGNAGGVGCQGHHGNPAGSQGPNGQPGPPGINGPPGQV 786
Query: 201 G-IGPNGLQGPTGQYRPGSP 257
G +GP GL GP G P SP
Sbjct: 787 GEMGPPGLPGPPGPASPPSP 806
Score = 34.7 bits (76), Expect = 0.033
Identities = 32/80 (40%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGP-DSAVGQGIQ-EPGNMYDSR-PNNQSPQYG----PG-I 200
P G P N P G+ GP +A G G Q GN S+ PN Q G PG +
Sbjct: 812 PPGPKGPPGPNGPLGPPGECGPAGNAGGVGCQGNHGNPAGSQGPNGQPGPPGINGPPGQV 871
Query: 201 G-IGPNGLQGPTGQYRPGSP 257
G +GP GL GP G P SP
Sbjct: 872 GEMGPPGLPGPPGPASPPSP 891
Score = 34.3 bits (75), Expect = 0.044
Identities = 26/68 (38%), Positives = 32/68 (47%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQ 224
PG Q GN +Q P+G GP+ +G PG+M P PQ GP + GP GL
Sbjct: 160 PGLQGNHGNPAGIQGPNGLPGPNGPLGPP-GPPGDM--GPPGLPGPQ-GPQMPPGPPGLP 215
Query: 225 GPTGQYRP 248
G G P
Sbjct: 216 GAPGPKGP 223
Score = 34.3 bits (75), Expect = 0.044
Identities = 21/72 (29%), Positives = 25/72 (34%)
Frame = +3
Query: 24 GQSRNQEPGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIG 203
G + P G P P+G GP G G Y N + GP
Sbjct: 629 GPASPPSPPGPPGPPGPKGPPGPNGPLGPPGESGPAGNAGGVGYQGNHGNPAGVQGPNGQ 688
Query: 204 IGPNGLQGPTGQ 239
GP G+ GP GQ
Sbjct: 689 PGPPGINGPPGQ 700
Score = 33.9 bits (74), Expect = 0.058
Identities = 32/97 (32%), Positives = 34/97 (35%), Gaps = 12/97 (12%)
Frame = +3
Query: 3 PGXQYGGGQSRNQEPGGQYAPGNQNIMQRPSGQYGPDSAVG-----------QGIQEPGN 149
PG Q G P G P N P G GP G GIQ P
Sbjct: 118 PGPQMPPGPPGLPGPPGPAGPPGTNGELGPPGDVGPPGNPGGPGLQGNHGNPAGIQGPNG 177
Query: 150 MYDSRPNNQSPQYGPGIGIGPNGLQGPTG-QYRPGSP 257
+ PN GP +GP GL GP G Q PG P
Sbjct: 178 L--PGPNGPLGPPGPPGDMGPPGLPGPQGPQMPPGPP 212
Score = 33.9 bits (74), Expect = 0.058
Identities = 31/89 (34%), Positives = 33/89 (37%), Gaps = 4/89 (4%)
Frame = +3
Query: 3 PGXQYGGGQSRN-QEPGGQYAPGNQNIMQRPSGQYGPDSAVG-QGIQEPGNMYDSRPNNQ 176
PG Q G Q P GQ P N P G GP G G Q P P
Sbjct: 330 PGYQGNHGNPAGPQGPNGQPGPPGINGPPGPLGDVGPPGLPGPPGPQMPPGP-PGLPGAP 388
Query: 177 SPQYGPGIG--IGPNGLQGPTGQYRPGSP 257
P+ PG +GP G GP G PG P
Sbjct: 389 GPKGPPGTNGPLGPPGDVGPPG--NPGGP 415
Score = 33.9 bits (74), Expect = 0.058
Identities = 31/103 (30%), Positives = 37/103 (35%), Gaps = 6/103 (5%)
Frame = +3
Query: 3 PGXQYGGG-QSRNQEPGGQYAPGNQNIMQRPSGQYGPDSAVGQ----GIQ-EPGNMYDSR 164
PG G G Q + P G P Q P G GP +G+ G+ PG
Sbjct: 579 PGNPGGPGYQGNHGNPAGPQGPNGQ---PGPPGVNGPPGEIGEIGPAGLPGPPGPASPPS 635
Query: 165 PNNQSPQYGPGIGIGPNGLQGPTGQYRPGSPEVKMLYQALEDN 293
P GP GPNG GP G+ P + YQ N
Sbjct: 636 PPGPPGPPGPKGPPGPNGPLGPPGESGPAGNAGGVGYQGNHGN 678
Score = 33.5 bits (73), Expect = 0.077
Identities = 22/79 (27%), Positives = 26/79 (32%)
Frame = +3
Query: 3 PGXQYGGGQSRNQEPGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSP 182
PG G + P G P P+G GP G G N +
Sbjct: 792 PGLPGPPGPASPPSPPGPPGPPGPKGPPGPNGPLGPPGECGPAGNAGGVGCQGNHGNPAG 851
Query: 183 QYGPGIGIGPNGLQGPTGQ 239
GP GP G+ GP GQ
Sbjct: 852 SQGPNGQPGPPGINGPPGQ 870
Score = 32.7 bits (71), Expect = 0.13
Identities = 32/80 (40%), Positives = 36/80 (45%), Gaps = 9/80 (11%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGP-DSAVGQGIQ-EPGNMYDSR-PNNQSPQYG----PG-I 200
P G P N P G+ GP +A G G Q GN + PN Q G PG I
Sbjct: 642 PPGPKGPPGPNGPLGPPGESGPAGNAGGVGYQGNHGNPAGVQGPNGQPGPPGINGPPGQI 701
Query: 201 G-IGPNGLQGPTGQYRPGSP 257
G +GP GL GP G P SP
Sbjct: 702 GEMGPPGLPGPPGPASPPSP 721
Score = 32.3 bits (70), Expect = 0.18
Identities = 24/76 (31%), Positives = 28/76 (36%)
Frame = +3
Query: 21 GGQSRNQEPGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGI 200
G + +Q P GQ P N G+ GP G PG P GP
Sbjct: 762 GNPAGSQGPNGQPGPPGINGPPGQVGEMGPPGLPGP----PGPASPPSPPGPPGPPGPKG 817
Query: 201 GIGPNGLQGPTGQYRP 248
GPNG GP G+ P
Sbjct: 818 PPGPNGPLGPPGECGP 833
Score = 32.3 bits (70), Expect = 0.18
Identities = 24/76 (31%), Positives = 27/76 (35%)
Frame = +3
Query: 21 GGQSRNQEPGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGI 200
G + +Q P GQ P N G+ GP G PG P GP
Sbjct: 847 GNPAGSQGPNGQPGPPGINGPPGQVGEMGPPGLPGP----PGPASPPSPPGPPGPPGPKG 902
Query: 201 GIGPNGLQGPTGQYRP 248
GPNG GP G P
Sbjct: 903 PPGPNGCLGPPGDAGP 918
Score = 31.9 bits (69), Expect = 0.23
Identities = 25/72 (34%), Positives = 28/72 (38%), Gaps = 1/72 (1%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQ 224
PG PG Q P+G GP+ G PN GP +GP GL
Sbjct: 239 PGNPGGPGYQGNHGNPAGPQGPNGLPG-------------PNGILGPPGPPGDMGPPGLP 285
Query: 225 GPTG-QYRPGSP 257
GP G Q PG P
Sbjct: 286 GPPGPQMPPGPP 297
Score = 31.9 bits (69), Expect = 0.23
Identities = 23/72 (31%), Positives = 27/72 (37%)
Frame = +3
Query: 21 GGQSRNQEPGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGI 200
G Q PG APG + +G GP VG G Y N + GP
Sbjct: 289 GPQMPPGPPGLPGAPGPKG-PPGTNGPLGPPGDVGPPGNPGGPGYQGNHGNPAGPQGPNG 347
Query: 201 GIGPNGLQGPTG 236
GP G+ GP G
Sbjct: 348 QPGPPGINGPPG 359
Score = 31.9 bits (69), Expect = 0.23
Identities = 26/72 (36%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQ 224
PG PG Q P+G GP+ +PG P P GP +GP GL
Sbjct: 324 PGNPGGPGYQGNHGNPAGPQGPNG-------QPGP-----PGINGPP-GPLGDVGPPGLP 370
Query: 225 GPTG-QYRPGSP 257
GP G Q PG P
Sbjct: 371 GPPGPQMPPGPP 382
Score = 31.9 bits (69), Expect = 0.23
Identities = 23/72 (31%), Positives = 27/72 (37%)
Frame = +3
Query: 21 GGQSRNQEPGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGI 200
G Q PG APG + +G GP VG G Y N + GP
Sbjct: 374 GPQMPPGPPGLPGAPGPKG-PPGTNGPLGPPGDVGPPGNPGGPGYQGNHGNPAGPQGPNG 432
Query: 201 GIGPNGLQGPTG 236
GP G+ GP G
Sbjct: 433 QPGPPGINGPPG 444
Score = 31.9 bits (69), Expect = 0.23
Identities = 26/72 (36%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQ 224
PG PG Q P+G GP+ +PG P P GP +GP GL
Sbjct: 409 PGNPGGPGYQGNHGNPAGPQGPNG-------QPGP-----PGINGPP-GPLGDVGPPGLP 455
Query: 225 GPTG-QYRPGSP 257
GP G Q PG P
Sbjct: 456 GPPGPQMPPGPP 467
Score = 31.9 bits (69), Expect = 0.23
Identities = 26/72 (36%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQ 224
PG PG Q P+G GP+ +PG P P GP +GP GL
Sbjct: 494 PGNPGGPGYQGNHGNPAGPQGPNG-------QPGP-----PGINGPP-GPLGDVGPPGLP 540
Query: 225 GPTG-QYRPGSP 257
GP G Q PG P
Sbjct: 541 GPPGPQMPPGPP 552
Score = 31.9 bits (69), Expect = 0.23
Identities = 35/94 (37%), Positives = 38/94 (40%), Gaps = 9/94 (9%)
Frame = +3
Query: 3 PGXQYGGGQSRNQEPGGQYAPGNQNIMQRPSGQYGPD-SAVGQGIQ-EPGNMYDSR-PNN 173
PG Q G G P N P G+ GP + G G Q GN + PN
Sbjct: 543 PGPQMPPGPPGLPGAPGPNGPPGINGPLGPPGEAGPPGNPGGPGYQGNHGNPAGPQGPNG 602
Query: 174 QSPQYG----PG-IG-IGPNGLQGPTGQYRPGSP 257
Q G PG IG IGP GL GP G P SP
Sbjct: 603 QPGPPGVNGPPGEIGEIGPAGLPGPPGPASPPSP 636
Score = 31.5 bits (68), Expect = 0.31
Identities = 24/76 (31%), Positives = 27/76 (35%)
Frame = +3
Query: 21 GGQSRNQEPGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGI 200
G + Q P GQ P N G+ GP G PG P GP
Sbjct: 677 GNPAGVQGPNGQPGPPGINGPPGQIGEMGPPGLPGP----PGPASPPSPPGPPGPPGPNG 732
Query: 201 GIGPNGLQGPTGQYRP 248
GPNG GP G+ P
Sbjct: 733 PPGPNGPLGPPGECGP 748
Score = 30.7 bits (66), Expect = 0.54
Identities = 23/72 (31%), Positives = 26/72 (36%)
Frame = +3
Query: 21 GGQSRNQEPGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGI 200
G Q PG APG N +G GP G G Y N + GP
Sbjct: 459 GPQMPPGPPGLPGAPG-PNGPPGINGPLGPPGEAGPPGNPGGPGYQGNHGNPAGPQGPNG 517
Query: 201 GIGPNGLQGPTG 236
GP G+ GP G
Sbjct: 518 QPGPPGINGPPG 529
Score = 30.7 bits (66), Expect = 0.54
Identities = 23/70 (32%), Positives = 27/70 (38%)
Frame = +3
Query: 48 GGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQG 227
G Q GN +Q P+GQ GP G PG + + P GP P G G
Sbjct: 671 GYQGNHGNPAGVQGPNGQPGPPGINGP----PGQIGEMGPPGLPGPPGPASPPSPPGPPG 726
Query: 228 PTGQYRPGSP 257
P G P P
Sbjct: 727 PPGPNGPPGP 736
Score = 30.3 bits (65), Expect = 0.72
Identities = 25/68 (36%), Positives = 26/68 (38%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQ 224
PG PG Q P+G GP G PG P Q P P IGP GL
Sbjct: 45 PGPDGPPGFPG-PQGPNGPKGPPGLPGP----PGP-----PGFQGPPGNPAGAIGPPGLP 94
Query: 225 GPTGQYRP 248
GP G P
Sbjct: 95 GPNGVNGP 102
Score = 29.9 bits (64), Expect = 0.95
Identities = 23/70 (32%), Positives = 26/70 (37%)
Frame = +3
Query: 48 GGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQG 227
G Q GN Q P+GQ GP G PG + + P GP P G G
Sbjct: 756 GCQGHHGNPAGSQGPNGQPGPPGINGP----PGQVGEMGPPGLPGPPGPASPPSPPGPPG 811
Query: 228 PTGQYRPGSP 257
P G P P
Sbjct: 812 PPGPKGPPGP 821
Score = 29.9 bits (64), Expect = 0.95
Identities = 23/70 (32%), Positives = 26/70 (37%)
Frame = +3
Query: 48 GGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQG 227
G Q GN Q P+GQ GP G PG + + P GP P G G
Sbjct: 841 GCQGNHGNPAGSQGPNGQPGPPGINGP----PGQVGEMGPPGLPGPPGPASPPSPPGPPG 896
Query: 228 PTGQYRPGSP 257
P G P P
Sbjct: 897 PPGPKGPPGP 906
Score = 27.9 bits (59), Expect = 3.8
Identities = 26/86 (30%), Positives = 29/86 (33%), Gaps = 1/86 (1%)
Frame = +3
Query: 3 PGXQYGGGQSRNQEPGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSP 182
PG G Q P G P P G GP I PG + N
Sbjct: 45 PGPDGPPGFPGPQGPNGPKGPPGLPGPPGPPGFQGPPGNPAGAIGPPGLPGPNGVNGPPG 104
Query: 183 QYGPGIGIGPNGLQGPTG-QYRPGSP 257
+ G +GP G GP G Q PG P
Sbjct: 105 ELGD---MGPPGPPGPPGPQMPPGPP 127
Score = 27.1 bits (57), Expect = 6.7
Identities = 23/75 (30%), Positives = 29/75 (38%), Gaps = 2/75 (2%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQ-EPGNMYDSR-PNNQSPQYGPGIGIGPNG 218
PG + PG + P P + G G Q GN + PN Q G GP G
Sbjct: 303 PGPKGPPGTNGPLGPPGDVGPPGNPGGPGYQGNHGNPAGPQGPNGQPGPPGINGPPGPLG 362
Query: 219 LQGPTGQYRPGSPEV 263
GP G P P++
Sbjct: 363 DVGPPGLPGPPGPQM 377
Score = 27.1 bits (57), Expect = 6.7
Identities = 23/75 (30%), Positives = 29/75 (38%), Gaps = 2/75 (2%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQ-EPGNMYDSR-PNNQSPQYGPGIGIGPNG 218
PG + PG + P P + G G Q GN + PN Q G GP G
Sbjct: 388 PGPKGPPGTNGPLGPPGDVGPPGNPGGPGYQGNHGNPAGPQGPNGQPGPPGINGPPGPLG 447
Query: 219 LQGPTGQYRPGSPEV 263
GP G P P++
Sbjct: 448 DVGPPGLPGPPGPQM 462
>SB_36007| Best HMM Match : Collagen (HMM E-Value=9e-25)
Length = 311
Score = 37.5 bits (83), Expect = 0.005
Identities = 30/86 (34%), Positives = 35/86 (40%), Gaps = 1/86 (1%)
Frame = +3
Query: 3 PGXQ-YGGGQSRNQEPGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQS 179
PG Q + G + N G PG Q+ Q P G G GQ Q P + SRP
Sbjct: 123 PGPQGFNGARGPNGPKGDSGRPG-QDGRQGPPGPPGARGEPGQ--QAPMMIQVSRPGPNK 179
Query: 180 PQYGPGIGIGPNGLQGPTGQYRPGSP 257
GPG G GP GP +P P
Sbjct: 180 GPPGPGPGPGPGPAPGPGPIVQPVVP 205
Score = 33.5 bits (73), Expect = 0.077
Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +3
Query: 42 EPGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNM-YDSRPNNQSPQYGPGIGIGPNG 218
E G + APG Q + + + P S G G E G+ D P + PQ G GPNG
Sbjct: 80 EKGYRGAPGRQGLQGKRGPEGDPGSPGGSG--EAGDKGVDGPPGSPGPQ-GFNGARGPNG 136
Query: 219 LQGPTGQYRPG 251
+G +G RPG
Sbjct: 137 PKGDSG--RPG 145
>SB_12339| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 116
Score = 37.5 bits (83), Expect = 0.005
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = -3
Query: 428 FHFVPLDHIEFQELEFRFDHLDHIDY*DLEFHFDHLDHIEFQNHHI 291
+ ++ HIE++ +E+R HI+Y +E+ + HIE+ HHI
Sbjct: 42 YRYIEYRHIEYRHIEYRHIEYRHIEYRHIEYRYIKYRHIEY--HHI 85
Score = 29.9 bits (64), Expect = 0.95
Identities = 10/41 (24%), Positives = 22/41 (53%)
Frame = -3
Query: 428 FHFVPLDHIEFQELEFRFDHLDHIDY*DLEFHFDHLDHIEF 306
+ + HIE++ +E+R+ HI+Y +E+ + E+
Sbjct: 57 YRHIEYRHIEYRHIEYRYIKYRHIEYHHIEYRYIEYRRFEY 97
Score = 29.5 bits (63), Expect = 1.3
Identities = 11/42 (26%), Positives = 23/42 (54%)
Frame = -3
Query: 428 FHFVPLDHIEFQELEFRFDHLDHIDY*DLEFHFDHLDHIEFQ 303
+ + HIE++ +E+R +I Y +E+H +IE++
Sbjct: 52 YRHIEYRHIEYRHIEYRHIEYRYIKYRHIEYHHIEYRYIEYR 93
Score = 28.3 bits (60), Expect = 2.9
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = -3
Query: 407 HIEFQELEFRFDHLDHIDY*DLEFHFDHLDHIEFQ 303
++E++ +E+R HI+Y +E+ HIE++
Sbjct: 39 YVEYRYIEYRHIEYRHIEYRHIEYRHIEYRHIEYR 73
Score = 27.9 bits (59), Expect = 3.8
Identities = 12/54 (22%), Positives = 26/54 (48%)
Frame = -3
Query: 428 FHFVPLDHIEFQELEFRFDHLDHIDY*DLEFHFDHLDHIEFQNHHIVLQGLIQH 267
+ + HIE++ +++R HI+Y +E+ +IE + + L+ H
Sbjct: 62 YRHIEYRHIEYRYIKYRHIEYHHIEYRYIEYRRFEYSYIEDPLYPTFFKSLVAH 115
>SB_35558| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 228
Score = 37.5 bits (83), Expect = 0.005
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = -3
Query: 428 FHFVPLDHIEFQELEFRFDHLDHIDY*DLEFHFDHLDHIEFQNHHI 291
+ ++ HIE++ +E+R HI+Y +E+ + HIE+ HHI
Sbjct: 155 YRYIEYRHIEYRHIEYRHIEYRHIEYRHIEYRYIKYRHIEY--HHI 198
Score = 29.9 bits (64), Expect = 0.95
Identities = 10/41 (24%), Positives = 22/41 (53%)
Frame = -3
Query: 428 FHFVPLDHIEFQELEFRFDHLDHIDY*DLEFHFDHLDHIEF 306
+ + HIE++ +E+R+ HI+Y +E+ + E+
Sbjct: 170 YRHIEYRHIEYRHIEYRYIKYRHIEYHHIEYRYIEYRRFEY 210
Score = 29.5 bits (63), Expect = 1.3
Identities = 11/42 (26%), Positives = 23/42 (54%)
Frame = -3
Query: 428 FHFVPLDHIEFQELEFRFDHLDHIDY*DLEFHFDHLDHIEFQ 303
+ + HIE++ +E+R +I Y +E+H +IE++
Sbjct: 165 YRHIEYRHIEYRHIEYRHIEYRYIKYRHIEYHHIEYRYIEYR 206
Score = 28.3 bits (60), Expect = 2.9
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = -3
Query: 407 HIEFQELEFRFDHLDHIDY*DLEFHFDHLDHIEFQ 303
++E++ +E+R HI+Y +E+ HIE++
Sbjct: 152 YVEYRYIEYRHIEYRHIEYRHIEYRHIEYRHIEYR 186
>SB_26644| Best HMM Match : Collagen (HMM E-Value=0)
Length = 877
Score = 37.1 bits (82), Expect = 0.006
Identities = 29/85 (34%), Positives = 37/85 (43%)
Frame = +3
Query: 3 PGXQYGGGQSRNQEPGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSP 182
PG Q G++ P G P +N P G G A G+ P + P ++
Sbjct: 780 PGPQ---GKNGKMGPTGPRGPSGKNGEPGPQGPEGEAGA--NGVSGPKG--EMGPEGEAG 832
Query: 183 QYGPGIGIGPNGLQGPTGQYRPGSP 257
Q GP GPNG G TGQ PG+P
Sbjct: 833 QPGPPGPPGPNGPVGQTGQ--PGTP 855
Score = 30.7 bits (66), Expect = 0.54
Identities = 23/73 (31%), Positives = 29/73 (39%), Gaps = 2/73 (2%)
Frame = +3
Query: 27 QSRNQEPGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQE--PGNMYDSRPNNQSPQYGPGI 200
Q + PG Q PG + +G+ GP A G Q PG GP
Sbjct: 355 QGSSGVPGAQGMPGPRGSTGE-AGRQGPPGANGDRGQPGAPGAEGAMGEKGNQGSRGPTG 413
Query: 201 GIGPNGLQGPTGQ 239
+GP+G GP GQ
Sbjct: 414 RVGPDGKTGPKGQ 426
Score = 29.5 bits (63), Expect = 1.3
Identities = 24/81 (29%), Positives = 32/81 (39%), Gaps = 2/81 (2%)
Frame = +3
Query: 24 GQSRNQEPGGQYAPGNQNIMQRPSGQYGPDSAVGQ-GIQEP-GNMYDSRPNNQSPQYGPG 197
G++ P G +N + G G D A G G Q P G P ++ + GP
Sbjct: 733 GEAGPDGPAGPAGLDGKNGINGEDGAPGSDGAQGNPGPQGPTGTRGIPGPQGKNGKMGP- 791
Query: 198 IGIGPNGLQGPTGQYRPGSPE 260
GP G G G+ P PE
Sbjct: 792 --TGPRGPSGKNGEPGPQGPE 810
Score = 27.9 bits (59), Expect = 3.8
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +3
Query: 168 NNQSPQYGPGIGIGPNGLQGPTGQYRPGSPE 260
N Q GP GP GLQG G P P+
Sbjct: 528 NGQRGVTGPSGSPGPGGLQGAAGMPGPAGPK 558
>SB_29069| Best HMM Match : Furin-like (HMM E-Value=0.042)
Length = 628
Score = 36.3 bits (80), Expect = 0.011
Identities = 27/80 (33%), Positives = 32/80 (40%), Gaps = 3/80 (3%)
Frame = +3
Query: 6 GXQYGGGQSRNQEPGGQYAPGNQNIMQR-PSGQYGPDSAVGQGIQEPGNMYDSRPNNQSP 182
G G G Q PGG + G M R P G +G S G G + G M
Sbjct: 7 GWGRGSGGGWGQGPGGGWGRGQGGGMGRGPGGGWGRGSGGGWGRMQGGGMGRGPGGGWGR 66
Query: 183 QYGPGIGIGPNG--LQGPTG 236
G G+G GP G +GP G
Sbjct: 67 MQGGGMGRGPGGGLGRGPGG 86
>SB_35402| Best HMM Match : Collagen (HMM E-Value=0.39)
Length = 657
Score = 34.7 bits (76), Expect = 0.033
Identities = 23/74 (31%), Positives = 28/74 (37%), Gaps = 2/74 (2%)
Frame = +3
Query: 21 GGQSRNQEPGGQYAPGNQNIMQRPSGQYGPDSAVGQG--IQEPGNMYDSRPNNQSPQYGP 194
GGQ GGQ Q GQ GP + +GQG + + G P Q Q P
Sbjct: 216 GGQMNQMRQGGQMNQMGQGGQMNQMGQGGPMNQMGQGGQMNQMGQGGQMNPFGQGGQIQP 275
Query: 195 GIGIGPNGLQGPTG 236
+G N P G
Sbjct: 276 QMGGNQNNPYNPYG 289
>SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1853
Score = 34.3 bits (75), Expect = 0.044
Identities = 33/91 (36%), Positives = 42/91 (46%), Gaps = 12/91 (13%)
Frame = +3
Query: 21 GGQSRNQEPG--GQYAPGNQNIMQRPSGQYGPDSAVG-QGIQ-EPGNMYDSRPNNQSP-- 182
G +N PG G+ P +N + G GPD G QG++ +PG P P
Sbjct: 1166 GRDGQNGSPGRKGEPGPAGKNGINGLDGPPGPDGPAGVQGVKGDPGVGQPGLPGPAGPKG 1225
Query: 183 QYG----PGI-GI-GPNGLQGPTGQYRPGSP 257
+ G PGI GI G GL+GP G PG P
Sbjct: 1226 ERGVNGFPGIKGIQGVQGLEGPPGP--PGPP 1254
Score = 27.9 bits (59), Expect = 3.8
Identities = 21/70 (30%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Frame = +3
Query: 42 EPGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQ-EPGNMYDSRPNNQSPQYGPGIGIGPNG 218
EPG G+ I + P QG++ EPG + + + GP G NG
Sbjct: 1131 EPGSLGEKGDAGIPGQRGLTGNPGLPGAQGLKGEPGRDGQNGSPGRKGEPGPAGKNGING 1190
Query: 219 LQGPTGQYRP 248
L GP G P
Sbjct: 1191 LDGPPGPDGP 1200
Score = 27.9 bits (59), Expect = 3.8
Identities = 21/70 (30%), Positives = 30/70 (42%)
Frame = +3
Query: 48 GGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQG 227
G PG Q + P G+ G + + G+ EPG + N GP G G++G
Sbjct: 1151 GNPGLPGAQGLKGEP-GRDGQNGSPGRK-GEPGPAGKNGINGLDGPPGPDGPAGVQGVKG 1208
Query: 228 PTGQYRPGSP 257
G +PG P
Sbjct: 1209 DPGVGQPGLP 1218
Score = 27.5 bits (58), Expect = 5.0
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Frame = +3
Query: 90 PSGQYGPDSAVGQGIQ-EPGNMYDSRPNNQSPQYG-PGIGIGPNGLQGPTGQYRPGSPE 260
P G+ G + +G++ EPG P G PG+ G GL GP G P PE
Sbjct: 257 PKGEPGRAPTLLKGVKGEPGPEGPQGPPGVRGDTGFPGLN-GTQGLPGPKGPPGPTGPE 314
>SB_15904| Best HMM Match : Collagen (HMM E-Value=4.1e-11)
Length = 376
Score = 33.1 bits (72), Expect = 0.10
Identities = 22/59 (37%), Positives = 24/59 (40%), Gaps = 3/59 (5%)
Frame = +3
Query: 90 PSGQYGPDSAVG-QGIQEPGNMYDSRPNNQSPQYGPGI--GIGPNGLQGPTGQYRPGSP 257
P GQ GP G QG P ++ Q PQ PG GP G GP G P P
Sbjct: 222 PQGQQGPPGTKGPQGFMGPRG-HNGTAGQQGPQGPPGPKGDTGPAGPGGPRGNQGPPGP 279
Score = 32.7 bits (71), Expect = 0.13
Identities = 25/77 (32%), Positives = 30/77 (38%), Gaps = 2/77 (2%)
Frame = +3
Query: 33 RNQEPGGQYAPGNQNIMQRPSGQYGPDSAVGQ-GIQEPGNMYDSRPNNQSP-QYGPGIGI 206
R + G P N + P G GP G G + P R +N + Q GP
Sbjct: 197 RLSQASGSTGPRGYNGSRGPPGPSGPQGQQGPPGTKGPQGFMGPRGHNGTAGQQGPQGPP 256
Query: 207 GPNGLQGPTGQYRPGSP 257
GP G GP G PG P
Sbjct: 257 GPKGDTGPAG---PGGP 270
>SB_25350| Best HMM Match : Collagen (HMM E-Value=0)
Length = 1112
Score = 32.7 bits (71), Expect = 0.13
Identities = 29/87 (33%), Positives = 34/87 (39%), Gaps = 3/87 (3%)
Frame = +3
Query: 6 GXQYGGGQSRNQEPGGQYA-PGNQNIM--QRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQ 176
G Q G++ P G PGNQ + P G GP G Q G + PN+
Sbjct: 22 GDQGPSGEAGKPGPLGYNGQPGNQGMRGDPGPQGDQGPQGPPGGSTQTAGGIKGPDPND- 80
Query: 177 SPQYGPGIGIGPNGLQGPTGQYRPGSP 257
GI G NG GP G PG P
Sbjct: 81 ---LAAGIK-GSNGAPGPRGS--PGLP 101
Score = 30.7 bits (66), Expect = 0.54
Identities = 26/80 (32%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = +3
Query: 21 GGQSRNQEPGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEP-GNMYDSRPNNQSPQYGPG 197
G N EPG Q A G + + G+ GP A QG P G+ + P + + GP
Sbjct: 825 GPLGANGEPGVQGAKGARGDDGK-DGKQGP--AGPQGPNGPQGDKGNRGPRGEKGEQGPP 881
Query: 198 IGIGPNGLQGPTGQYRPGSP 257
G +G GP G P P
Sbjct: 882 GVAGTDGPPGPRGNVGPMGP 901
Score = 29.1 bits (62), Expect = 1.7
Identities = 25/70 (35%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +3
Query: 48 GGQYAPGNQNIMQRP--SGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGL 221
G Q APG Q P +G+ GP G +PG M + P ++ GP GL
Sbjct: 441 GPQGAPGTQGPPGLPGKTGESGPRGERGTD-GKPGAMGERGPQGET---------GPTGL 490
Query: 222 QGPTGQYRPG 251
GPTG +PG
Sbjct: 491 TGPTG--KPG 498
Score = 28.7 bits (61), Expect = 2.2
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +3
Query: 90 PSGQYGPDSAVGQGIQEPGNM-YDSRPNNQSPQYGPGIGIGPNGLQGPTG 236
P G G G+ +PG + Y+ +P NQ + P GP G QGP G
Sbjct: 17 PPGDIGDQGPSGEA-GKPGPLGYNGQPGNQGMRGDP----GPQGDQGPQG 61
Score = 28.7 bits (61), Expect = 2.2
Identities = 23/79 (29%), Positives = 32/79 (40%)
Frame = +3
Query: 3 PGXQYGGGQSRNQEPGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSP 182
PG Q G S G P PSG G + G ++ G P+ +
Sbjct: 650 PGSQGMPGMSGPPGRPGPPGPPGPPGPSGPSGSNGRNGVKGTPGRD-GEPGIPGPDGRPG 708
Query: 183 QYGPGIGIGPNGLQGPTGQ 239
+ GPG IG G +GP+G+
Sbjct: 709 ERGPGGEIGRKGEKGPSGE 727
Score = 27.1 bits (57), Expect = 6.7
Identities = 35/105 (33%), Positives = 42/105 (40%), Gaps = 26/105 (24%)
Frame = +3
Query: 21 GGQSRNQEPGGQYAPGNQNIMQRPSGQYGPDSAVGQ-GIQ----EPGNMYDS-------- 161
G + + G + +PGNQ P G GP + GQ GI EPG D
Sbjct: 189 GLKGKRGATGSRGSPGNQG----PQGPSGPQGSKGQAGIDGRPGEPGLPGDKGAMGGPGP 244
Query: 162 --RPNNQSPQYGPGI-------GI----GPNGLQGPTGQYRPGSP 257
+P + P PGI GI GPNG GP G PG P
Sbjct: 245 AGQPGIRGPSGAPGITGNPGATGINGDRGPNGSPGPRG--APGPP 287
>SB_21646| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 32.7 bits (71), Expect = 0.13
Identities = 23/81 (28%), Positives = 30/81 (37%), Gaps = 2/81 (2%)
Frame = +3
Query: 21 GGQSRNQEPGGQYAPGNQNIMQRPSGQYGPDSAVGQ-GIQ-EPGNMYDSRPNNQSPQYGP 194
G + + PG +PG + P G G G GI +PG + + GP
Sbjct: 59 GPKGDSGSPGAVGSPGPMG-PEGPKGDKGDKGDTGAPGIDGQPGPQGEKGETGPQGEQGP 117
Query: 195 GIGIGPNGLQGPTGQYRPGSP 257
GP G GP G P P
Sbjct: 118 KGDTGPQGQPGPEGPQGPAGP 138
Score = 31.5 bits (68), Expect = 0.31
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = +3
Query: 96 GQYGPDSAVGQ-GIQ-EPGNMYDSRPNNQSPQYGPGIGIGPNGLQGPTG 236
GQ GP G+ G Q E G D+ P Q GP GP+G GP G
Sbjct: 98 GQPGPQGEKGETGPQGEQGPKGDTGPQGQPGPEGPQGPAGPSGADGPQG 146
>SB_53344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1554
Score = 32.3 bits (70), Expect = 0.18
Identities = 32/92 (34%), Positives = 38/92 (41%), Gaps = 7/92 (7%)
Frame = +3
Query: 3 PGXQYGG--GQSRNQEPG----GQYA-PGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDS 161
P Q GG GQ Q P Q + PG Q MQRP G Q Q PG S
Sbjct: 505 PTSQPGGFPGQQMQQHPAPLPTSQPSFPGQQ--MQRPGGPPTSQPGGFQHQQRPGAPPTS 562
Query: 162 RPNNQSPQYGPGIGIGPNGLQGPTGQYRPGSP 257
+P SPQ + + + G Q RPG+P
Sbjct: 563 QPGFPSPQMQEPMQLPTSQPGGFPPQQRPGAP 594
Score = 26.6 bits (56), Expect = 8.8
Identities = 29/118 (24%), Positives = 39/118 (33%), Gaps = 11/118 (9%)
Frame = +3
Query: 3 PGXQYGGGQSRNQEPG-------GQYAPGNQNIMQRPSGQYG---PDSAVGQG-IQEPGN 149
P GG Q PG G +P Q MQ P+ Q G P G +PG
Sbjct: 542 PPTSQPGGFQHQQRPGAPPTSQPGFPSPQMQEPMQLPTSQPGGFPPQQRPGAPPTSQPGG 601
Query: 150 MYDSRPNNQSPQYGPGIGIGPNGLQGPTGQYRPGSPEVKMLYQALEDNMVVLELNMVQ 323
RP + + P+G T +P P +Q + M L + Q
Sbjct: 602 FPPQRPGMPPMSQPSSMHMQPSGQPQSTAPQQPSQPLRPHPHQQMNSQMQNLHITSSQ 659
>SB_13207| Best HMM Match : Extensin_2 (HMM E-Value=0.061)
Length = 2735
Score = 32.3 bits (70), Expect = 0.18
Identities = 20/53 (37%), Positives = 23/53 (43%)
Frame = +3
Query: 90 PSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQGPTGQYRP 248
P YGP+ G G G M N P++GP G GP G GP Y P
Sbjct: 1213 PGAGYGPEFPSGPGPFNYGPMVGPF-NGYGPRFGPFNGFGPAG-PGPLHGYGP 1263
>SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1705
Score = 31.1 bits (67), Expect = 0.41
Identities = 27/76 (35%), Positives = 34/76 (44%), Gaps = 11/76 (14%)
Frame = +3
Query: 45 PGGQYAPGNQNI-MQRPSGQYGPDSAVGQ----GI----QEPGNMYDSRPNNQSPQYG-P 194
PG + PG Q + P G+ GP + G GI G D+ P Q G P
Sbjct: 80 PGAKGLPGAQQYGLPGPLGEAGPPGSQGSPGAPGIIGMNGAMGKKGDTGPLGPKGQPGSP 139
Query: 195 GIGI-GPNGLQGPTGQ 239
GI I GP G+ GP G+
Sbjct: 140 GIDIPGPKGMDGPPGE 155
Score = 28.3 bits (60), Expect = 2.9
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 165 PNNQSPQYGPGIGIGPNGLQGPTGQYRPGSP 257
P+ + Q GP G +GL+GP G PG P
Sbjct: 431 PDGRDGQSGPKGLPGDDGLKGPPGDGLPGKP 461
>SB_3936| Best HMM Match : Collagen (HMM E-Value=7.5e-24)
Length = 270
Score = 31.1 bits (67), Expect = 0.41
Identities = 27/76 (35%), Positives = 34/76 (44%), Gaps = 11/76 (14%)
Frame = +3
Query: 45 PGGQYAPGNQNI-MQRPSGQYGPDSAVGQ----GI----QEPGNMYDSRPNNQSPQYG-P 194
PG + PG Q + P G+ GP + G GI G D+ P Q G P
Sbjct: 80 PGAKGLPGAQQYGLPGPLGEAGPPGSQGSPGAPGIIGMNGAMGKKGDTGPLGPKGQPGSP 139
Query: 195 GIGI-GPNGLQGPTGQ 239
GI I GP G+ GP G+
Sbjct: 140 GIDIPGPKGMDGPPGE 155
>SB_46131| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 899
Score = 30.3 bits (65), Expect = 0.72
Identities = 28/83 (33%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = +3
Query: 6 GXQYGGGQSRNQEPGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQS-P 182
G Q GGG + GGQ GN Q +G +G A+ NM S+P NQS
Sbjct: 329 GNQMGGGVVNSGNFGGQANTGNFG-GQGNTGNFGGQQAMNTQNVPQTNM-QSQPFNQSNN 386
Query: 183 QYGPGIGIGPNGLQGPTGQYRPG 251
Q+G G G Q T + G
Sbjct: 387 QFGSVQNTGSFGGQSTTAYGQSG 409
>SB_30003| Best HMM Match : DUF906 (HMM E-Value=0)
Length = 2276
Score = 30.3 bits (65), Expect = 0.72
Identities = 26/72 (36%), Positives = 30/72 (41%), Gaps = 6/72 (8%)
Frame = +3
Query: 3 PGXQYGGGQSRNQEPGGQYAPGNQNIMQRPSGQYGPDSAVGQG-IQEPG-----NMYDSR 164
PG Q G R P G G Q MQ Q P++AV G +Q PG MY
Sbjct: 1726 PGMQ---GMMRPTNPAGFMQQGMQPGMQ----QGMPNTAVNAGQMQRPGMRPGWQMYQQN 1778
Query: 165 PNNQSPQYGPGI 200
P Q Q PG+
Sbjct: 1779 PQQQQQQQNPGV 1790
>SB_27478| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 323
Score = 30.3 bits (65), Expect = 0.72
Identities = 21/66 (31%), Positives = 25/66 (37%), Gaps = 2/66 (3%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGPDSAVGQ-GIQEP-GNMYDSRPNNQSPQYGPGIGIGPNG 218
P G P P+G GP G G P G + P + GP GP G
Sbjct: 158 PTGPTGPKGDTGATGPAGPTGPTGPKGDTGATGPAGPAGPTGPKGDTGATGPTDPTGPTG 217
Query: 219 LQGPTG 236
+GPTG
Sbjct: 218 PKGPTG 223
Score = 27.9 bits (59), Expect = 3.8
Identities = 21/73 (28%), Positives = 27/73 (36%), Gaps = 2/73 (2%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGPDSAVGQ-GIQ-EPGNMYDSRPNNQSPQYGPGIGIGPNG 218
P G P P+G G A G G + + G + P + GP GP G
Sbjct: 53 PTGPTGPKGDTGATGPTGPKGDTGATGPTGPKGDTGATGPNGPKGDTGATGPAGPTGPTG 112
Query: 219 LQGPTGQYRPGSP 257
+G TG P P
Sbjct: 113 PKGDTGPTDPTGP 125
Score = 27.9 bits (59), Expect = 3.8
Identities = 17/56 (30%), Positives = 22/56 (39%)
Frame = +3
Query: 90 PSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQGPTGQYRPGSP 257
P+G GP G + G + P + GP GP G +G TG P P
Sbjct: 248 PTGPTGPTGPKG----DTGATGPTGPKGDTGATGPAGPTGPTGPKGDTGATGPAGP 299
Score = 27.5 bits (58), Expect = 5.0
Identities = 17/56 (30%), Positives = 21/56 (37%)
Frame = +3
Query: 90 PSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQGPTGQYRPGSP 257
P+G GP G G + P + GP GP G +G TG P P
Sbjct: 158 PTGPTGPKGDTG-ATGPAGPTGPTGPKGDTGATGPAGPAGPTGPKGDTGATGPTDP 212
Score = 27.5 bits (58), Expect = 5.0
Identities = 21/73 (28%), Positives = 25/73 (34%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQ 224
P G P P+G G A G G + P + GP GP G +
Sbjct: 251 PTGPTGPKGDTGATGPTGPKGDTGATGPA----GPTGPTGPKGDTGATGPAGPTGPTGPK 306
Query: 225 GPTGQYRPGSPEV 263
G TG P P V
Sbjct: 307 GDTGATGPLIPAV 319
>SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11)
Length = 1903
Score = 30.3 bits (65), Expect = 0.72
Identities = 30/87 (34%), Positives = 32/87 (36%), Gaps = 9/87 (10%)
Frame = +3
Query: 24 GQSRNQEPGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNM-----YDSRPNNQSPQY 188
G S P G P M P G GP A+G PGN D P PQ
Sbjct: 1777 GASGVDGPPGLAGPQGPKGMPGPPGPPGPPGAIGWK-GNPGNPAGPPGLDGPPGPPGPQ- 1834
Query: 189 GPGIGIGPNGLQGPTGQY----RPGSP 257
GP G G GP G Y PG+P
Sbjct: 1835 GPKGWPGVPGPPGPPGAYGWKGYPGNP 1861
Score = 28.3 bits (60), Expect = 2.9
Identities = 24/59 (40%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +3
Query: 63 PGNQNIMQRPSGQYGPDSAVG-QGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQGPTG 236
PG Q P G GP G QGI PG Y P + GP GP+G QGP G
Sbjct: 1682 PGPQG-PDGPKGPPGPPGLPGPQGI--PG--YPGAPAGPPGRDGPMGPPGPSGGQGPPG 1735
>SB_23501| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 585
Score = 29.9 bits (64), Expect = 0.95
Identities = 22/83 (26%), Positives = 29/83 (34%), Gaps = 3/83 (3%)
Frame = +3
Query: 12 QYGGGQSRNQEPGG---QYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSP 182
Q G + Q+P G Q Q+PSG G G Q+ + Y + + Q P
Sbjct: 371 QQPSGYGQQQQPSGYGQQQQSSGYGQQQQPSGYGQRQQPSGYGQQQQSSGYGQQQSYQYP 430
Query: 183 QYGPGIGIGPNGLQGPTGQYRPG 251
Y G Q P PG
Sbjct: 431 SYQQPSGGYNYNYQSPYSSLYPG 453
>SB_7530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 29.9 bits (64), Expect = 0.95
Identities = 22/83 (26%), Positives = 29/83 (34%), Gaps = 3/83 (3%)
Frame = +3
Query: 12 QYGGGQSRNQEPGG---QYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSP 182
Q G + Q+P G Q Q+PSG G G Q+ + Y + + Q P
Sbjct: 61 QQPSGYGQRQQPSGYGQQQQSSGYGQQQQPSGYGQRQQPSGYGQQQQSSGYGQQQSYQYP 120
Query: 183 QYGPGIGIGPNGLQGPTGQYRPG 251
Y G Q P PG
Sbjct: 121 SYQQPSGGYNYNYQSPYSSLYPG 143
>SB_55304| Best HMM Match : Collagen (HMM E-Value=0.11)
Length = 853
Score = 29.5 bits (63), Expect = 1.3
Identities = 20/78 (25%), Positives = 26/78 (33%)
Frame = +3
Query: 24 GQSRNQEPGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIG 203
G S P AP + + P+GQ P + S P QS GP
Sbjct: 369 GPSDPTAPSDPTAPSDPTVPSDPTGQSDPTGPSDPTVHSDPTA-PSDPTGQSDPTGPSDP 427
Query: 204 IGPNGLQGPTGQYRPGSP 257
GP+ P+ P P
Sbjct: 428 TGPSDPTAPSDPTVPSDP 445
Score = 27.5 bits (58), Expect = 5.0
Identities = 18/72 (25%), Positives = 27/72 (37%)
Frame = +3
Query: 42 EPGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGL 221
+P G+ P + PS GP G G + P++ + P + P G
Sbjct: 306 DPTGRSDPTVHSDPTAPSDPTGPSDPTGPS-DPTGPSDPTAPSDPTAPSDPTVPSDPTGP 364
Query: 222 QGPTGQYRPGSP 257
PTG P +P
Sbjct: 365 SDPTGPSDPTAP 376
Score = 27.1 bits (57), Expect = 6.7
Identities = 24/86 (27%), Positives = 27/86 (31%), Gaps = 8/86 (9%)
Frame = +3
Query: 24 GQSRNQEPGGQYAPGNQNIMQRPSGQYGPDSAVGQG----IQEPGNMYD----SRPNNQS 179
GQS P AP + P+ GP G +P D S P S
Sbjct: 129 GQSDPTAPSDPTAPSDPTGPSDPTAPTGPSDPTGPSDPTVSSDPTGPSDPTGPSDPTAPS 188
Query: 180 PQYGPGIGIGPNGLQGPTGQYRPGSP 257
GP P G PTG P P
Sbjct: 189 DPTGPSDPTAPTGPSDPTGPSDPTGP 214
>SB_38313| Best HMM Match : XYPPX (HMM E-Value=0.069)
Length = 135
Score = 29.5 bits (63), Expect = 1.3
Identities = 32/80 (40%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +3
Query: 45 PGGQY-APGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGL 221
PGG APG PSG YG A G +PG Y P P PGIG GP
Sbjct: 34 PGGYPPAPGGYP----PSGGYGYPPAGGYPPPQPG--YAGGP--PPPGIAPGIG-GP--- 81
Query: 222 QGPTGQYRPGSPEVKMLYQA 281
P+GQY G+P Y A
Sbjct: 82 -PPSGQY--GAPPTSQPYGA 98
>SB_14625| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.056)
Length = 245
Score = 29.5 bits (63), Expect = 1.3
Identities = 30/86 (34%), Positives = 34/86 (39%), Gaps = 1/86 (1%)
Frame = +3
Query: 3 PGXQYGGGQSRNQEPGGQYAPGNQNIM-QRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQS 179
PG Q GQ P GQ PG Q P + G G G Q G Y +P
Sbjct: 152 PGQQAYPGQP-GASPQGQPYPGQSYPQGQEPYPEKGGYPPAGVG-QHSGP-YPGQPGMWG 208
Query: 180 PQYGPGIGIGPNGLQGPTGQYRPGSP 257
P P +G GP + GP G Y P P
Sbjct: 209 P---PPMG-GPPPMGGPPGGYPPPPP 230
>SB_17317| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 29.5 bits (63), Expect = 1.3
Identities = 26/82 (31%), Positives = 32/82 (39%), Gaps = 10/82 (12%)
Frame = +3
Query: 21 GGQSRNQEPGGQYAPGNQNI-----MQRPSGQYGPDSAVGQ-----GIQEPGNMYDSRPN 170
G N +PG Q PG Q + Q SG G A G G+ G +
Sbjct: 315 GPDGSNGQPGRQGEPGKQGLPGESGAQGDSGDEGDGGAKGDKGVFGGVGLDGAEGEQGAR 374
Query: 171 NQSPQYGPGIGIGPNGLQGPTG 236
+S +GP IGP G GP G
Sbjct: 375 GKSGDFGP---IGPPGPLGPPG 393
>SB_17315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 405
Score = 28.7 bits (61), Expect = 2.2
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = +3
Query: 63 PGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIG--IGPNGLQGPTG 236
P + Q P G GP G G+ G R +Q P PG GP G++GP G
Sbjct: 14 PEGERGQQGPIGMTGPPGLAG-GVGANGP--SGRGGSQGPPGPPGAPGQPGPRGIKGPPG 70
Query: 237 Q 239
+
Sbjct: 71 R 71
>SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 964
Score = 28.7 bits (61), Expect = 2.2
Identities = 24/79 (30%), Positives = 26/79 (32%)
Frame = +3
Query: 18 GGGQSRNQEPGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPG 197
GGGQ Q P G G G P GQG +P P G G
Sbjct: 485 GGGQGWGQPPPGAGQGGGPPPPGAGQGGGPPPPGAGQGWGQPPPGAGQGGGPPPPGAGQG 544
Query: 198 IGIGPNGLQGPTGQYRPGS 254
G P G GQ PG+
Sbjct: 545 GGPPPPGAGQGWGQPPPGA 563
>SB_53730| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 28.3 bits (60), Expect = 2.9
Identities = 17/71 (23%), Positives = 25/71 (35%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQ 224
P +P + N + P+ P+S N +S PN+ + P PN
Sbjct: 80 PNSPNSPNSPNSINSPNSPNSPNSTNSPNSPNSPNSPNS-PNSPNSPNSPNSPNSPNSPN 138
Query: 225 GPTGQYRPGSP 257
P P SP
Sbjct: 139 SPNSPNSPNSP 149
Score = 27.9 bits (59), Expect = 3.8
Identities = 17/71 (23%), Positives = 25/71 (35%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQ 224
P +P + N + P+ P+S N +S PN+ + P PN
Sbjct: 5 PNSPNSPNSPNSINSPNSPNSPNSPNSPNSPNSPNSPNS-PNSPNSPNSPNSTNSPNSPN 63
Query: 225 GPTGQYRPGSP 257
P P SP
Sbjct: 64 SPNSPNSPNSP 74
Score = 27.1 bits (57), Expect = 6.7
Identities = 17/71 (23%), Positives = 24/71 (33%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQ 224
P +P + N P+ P+S N +S PN+ + P PN
Sbjct: 20 PNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSTNS-PNSPNSPNSPNSPNSPNSPN 78
Query: 225 GPTGQYRPGSP 257
P P SP
Sbjct: 79 SPNSPNSPNSP 89
Score = 27.1 bits (57), Expect = 6.7
Identities = 17/71 (23%), Positives = 24/71 (33%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQ 224
P +P + N P+ P+S N +S PN+ + P PN
Sbjct: 68 PNSPNSPNSPNSPNSPNSPNSPNSINSPNSPNSPNSTNS-PNSPNSPNSPNSPNSPNSPN 126
Query: 225 GPTGQYRPGSP 257
P P SP
Sbjct: 127 SPNSPNSPNSP 137
Score = 26.6 bits (56), Expect = 8.8
Identities = 17/71 (23%), Positives = 24/71 (33%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQ 224
P +P + N P+ P+S N +S PN+ + P PN
Sbjct: 47 PNSPNSPNSTNSPNSPNSPNSPNSPNSPNSPNSPNSPNS-PNSPNSINSPNSPNSPNSTN 105
Query: 225 GPTGQYRPGSP 257
P P SP
Sbjct: 106 SPNSPNSPNSP 116
Score = 26.6 bits (56), Expect = 8.8
Identities = 17/71 (23%), Positives = 24/71 (33%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQ 224
P +P + N P+ P+S N +S PN+ + P PN
Sbjct: 95 PNSPNSPNSTNSPNSPNSPNSPNSPNSPNSPNSPNSPNS-PNSPNSPNSPNSPNSPNSPN 153
Query: 225 GPTGQYRPGSP 257
P P SP
Sbjct: 154 SPNSPNSPNSP 164
Score = 26.6 bits (56), Expect = 8.8
Identities = 17/71 (23%), Positives = 24/71 (33%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQ 224
P +P + N P+ P+S N +S PN+ + P PN
Sbjct: 101 PNSTNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNS-PNSPNSPNSPNSPNSPNSPN 159
Query: 225 GPTGQYRPGSP 257
P P SP
Sbjct: 160 SPNSPNSPNSP 170
Score = 26.6 bits (56), Expect = 8.8
Identities = 17/71 (23%), Positives = 24/71 (33%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQ 224
P +P + N P+ P+S N +S PN+ + P PN
Sbjct: 107 PNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNS-PNSPNSPNSPNSPNSPNSPN 165
Query: 225 GPTGQYRPGSP 257
P P SP
Sbjct: 166 SPNSPNSPNSP 176
Score = 26.6 bits (56), Expect = 8.8
Identities = 17/71 (23%), Positives = 24/71 (33%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQ 224
P +P + N P+ P+S N +S PN+ + P PN
Sbjct: 110 PNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNS-PNSPNSPNSPNSPNSPNSPN 168
Query: 225 GPTGQYRPGSP 257
P P SP
Sbjct: 169 SPNSPNSPNSP 179
Score = 26.6 bits (56), Expect = 8.8
Identities = 17/71 (23%), Positives = 24/71 (33%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQ 224
P +P + N P+ P+S N +S PN+ + P PN
Sbjct: 113 PNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNS-PNSPNSPNSPNSPNSPNSPN 171
Query: 225 GPTGQYRPGSP 257
P P SP
Sbjct: 172 SPNSPNSPNSP 182
Score = 26.6 bits (56), Expect = 8.8
Identities = 17/71 (23%), Positives = 24/71 (33%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQ 224
P +P + N P+ P+S N +S PN+ + P PN
Sbjct: 116 PNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNS-PNSPNSPNSPNSPNSPNSPN 174
Query: 225 GPTGQYRPGSP 257
P P SP
Sbjct: 175 SPNSPNSPNSP 185
Score = 26.6 bits (56), Expect = 8.8
Identities = 17/71 (23%), Positives = 24/71 (33%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQ 224
P +P + N P+ P+S N +S PN+ + P PN
Sbjct: 119 PNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNS-PNSPNSPNSPNSPNSPNSPN 177
Query: 225 GPTGQYRPGSP 257
P P SP
Sbjct: 178 SPNSPNSPNSP 188
Score = 26.6 bits (56), Expect = 8.8
Identities = 17/71 (23%), Positives = 24/71 (33%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQ 224
P +P + N P+ P+S N +S PN+ + P PN
Sbjct: 122 PNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNS-PNSPNSPNSPNSPNSPNSPN 180
Query: 225 GPTGQYRPGSP 257
P P SP
Sbjct: 181 SPNSPNSPNSP 191
Score = 26.6 bits (56), Expect = 8.8
Identities = 17/71 (23%), Positives = 24/71 (33%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQ 224
P +P + N P+ P+S N +S PN+ + P PN
Sbjct: 125 PNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNS-PNSPNSPNSPNSPNSPNSPN 183
Query: 225 GPTGQYRPGSP 257
P P SP
Sbjct: 184 SPNSPNSPNSP 194
Score = 26.6 bits (56), Expect = 8.8
Identities = 17/71 (23%), Positives = 24/71 (33%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQ 224
P +P + N P+ P+S N +S PN+ + P PN
Sbjct: 128 PNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNS-PNSPNSPNSPNSPNSPNSPN 186
Query: 225 GPTGQYRPGSP 257
P P SP
Sbjct: 187 SPNSPNSPNSP 197
Score = 26.6 bits (56), Expect = 8.8
Identities = 17/71 (23%), Positives = 24/71 (33%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQ 224
P +P + N P+ P+S N +S PN+ + P PN
Sbjct: 131 PNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNS-PNSPNSPNSPNSPNSPNSPN 189
Query: 225 GPTGQYRPGSP 257
P P SP
Sbjct: 190 SPNSPNSPNSP 200
Score = 26.6 bits (56), Expect = 8.8
Identities = 17/71 (23%), Positives = 24/71 (33%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQ 224
P +P + N P+ P+S N +S PN+ + P PN
Sbjct: 134 PNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNS-PNSPNSPNSPNSPNSPNSPN 192
Query: 225 GPTGQYRPGSP 257
P P SP
Sbjct: 193 SPNSPNSPNSP 203
Score = 26.6 bits (56), Expect = 8.8
Identities = 17/71 (23%), Positives = 24/71 (33%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQ 224
P +P + N P+ P+S N +S PN+ + P PN
Sbjct: 137 PNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNS-PNSPNSPNSPNSPNSPNSPN 195
Query: 225 GPTGQYRPGSP 257
P P SP
Sbjct: 196 SPNSPNSPNSP 206
Score = 26.6 bits (56), Expect = 8.8
Identities = 17/71 (23%), Positives = 24/71 (33%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQ 224
P +P + N P+ P+S N +S PN+ + P PN
Sbjct: 140 PNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNS-PNSPNSPNSPNSPNSPNSPN 198
Query: 225 GPTGQYRPGSP 257
P P SP
Sbjct: 199 SPNSPNSPNSP 209
Score = 26.6 bits (56), Expect = 8.8
Identities = 17/71 (23%), Positives = 24/71 (33%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQ 224
P +P + N P+ P+S N +S PN+ + P PN
Sbjct: 143 PNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNS-PNSPNSPNSPNSPNSPNSPN 201
Query: 225 GPTGQYRPGSP 257
P P SP
Sbjct: 202 SPNSPNSPNSP 212
Score = 26.6 bits (56), Expect = 8.8
Identities = 17/71 (23%), Positives = 24/71 (33%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQ 224
P +P + N P+ P+S N +S PN+ + P PN
Sbjct: 146 PNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNS-PNSPNSPNSPNSPNSPNSPN 204
Query: 225 GPTGQYRPGSP 257
P P SP
Sbjct: 205 SPNSPNSPNSP 215
Score = 26.6 bits (56), Expect = 8.8
Identities = 17/71 (23%), Positives = 24/71 (33%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQ 224
P +P + N P+ P+S N +S PN+ + P PN
Sbjct: 149 PNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNS-PNSPNSPNSPNSPNSPNSPN 207
Query: 225 GPTGQYRPGSP 257
P P SP
Sbjct: 208 SPNSPNSPNSP 218
Score = 26.6 bits (56), Expect = 8.8
Identities = 17/71 (23%), Positives = 24/71 (33%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQ 224
P +P + N P+ P+S N +S PN+ + P PN
Sbjct: 152 PNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNS-PNSPNSPNSPNSPNSPNSPN 210
Query: 225 GPTGQYRPGSP 257
P P SP
Sbjct: 211 SPNSPNSPNSP 221
Score = 26.6 bits (56), Expect = 8.8
Identities = 17/71 (23%), Positives = 24/71 (33%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQ 224
P +P + N P+ P+S N +S PN+ + P PN
Sbjct: 155 PNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNS-PNSPNSPNSPNSPNSPNSPN 213
Query: 225 GPTGQYRPGSP 257
P P SP
Sbjct: 214 SPNSPNSPNSP 224
Score = 26.6 bits (56), Expect = 8.8
Identities = 17/71 (23%), Positives = 24/71 (33%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQ 224
P +P + N P+ P+S N +S PN+ + P PN
Sbjct: 158 PNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNS-PNSPNSPNSPNSPNSPNSPN 216
Query: 225 GPTGQYRPGSP 257
P P SP
Sbjct: 217 SPNSPNSPNSP 227
Score = 26.6 bits (56), Expect = 8.8
Identities = 17/71 (23%), Positives = 24/71 (33%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQ 224
P +P + N P+ P+S N +S PN+ + P PN
Sbjct: 161 PNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNS-PNSPNSPNSPNSPNSPNSPN 219
Query: 225 GPTGQYRPGSP 257
P P SP
Sbjct: 220 SPNSPNSPNSP 230
Score = 26.6 bits (56), Expect = 8.8
Identities = 17/71 (23%), Positives = 24/71 (33%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQ 224
P +P + N P+ P+S N +S PN+ + P PN
Sbjct: 164 PNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNS-PNSPNSPNSPNSPNSPNSPN 222
Query: 225 GPTGQYRPGSP 257
P P SP
Sbjct: 223 SPNSPNSPNSP 233
Score = 26.6 bits (56), Expect = 8.8
Identities = 17/71 (23%), Positives = 24/71 (33%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQ 224
P +P + N P+ P+S N +S PN+ + P PN
Sbjct: 167 PNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNS-PNSPNSPNSPNSPNSPNSPN 225
Query: 225 GPTGQYRPGSP 257
P P SP
Sbjct: 226 SPNSPNSPNSP 236
Score = 26.6 bits (56), Expect = 8.8
Identities = 17/71 (23%), Positives = 24/71 (33%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQ 224
P +P + N P+ P+S N +S PN+ + P PN
Sbjct: 170 PNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNS-PNSPNSPNSPNSPNSPNSPN 228
Query: 225 GPTGQYRPGSP 257
P P SP
Sbjct: 229 SPNSPNSPNSP 239
Score = 26.6 bits (56), Expect = 8.8
Identities = 17/71 (23%), Positives = 24/71 (33%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQ 224
P +P + N P+ P+S N +S PN+ + P PN
Sbjct: 173 PNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNS-PNSPNSPNSPNSPNSPNSPN 231
Query: 225 GPTGQYRPGSP 257
P P SP
Sbjct: 232 SPNSPNSPNSP 242
Score = 26.6 bits (56), Expect = 8.8
Identities = 17/71 (23%), Positives = 24/71 (33%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQ 224
P +P + N P+ P+S N +S PN+ + P PN
Sbjct: 176 PNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNS-PNSPNSPNSPNSPNSPNSPN 234
Query: 225 GPTGQYRPGSP 257
P P SP
Sbjct: 235 SPNSPNSPNSP 245
Score = 26.6 bits (56), Expect = 8.8
Identities = 17/71 (23%), Positives = 24/71 (33%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQ 224
P +P + N P+ P+S N +S PN+ + P PN
Sbjct: 179 PNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNS-PNSPNSPNSPNSPNSPNSPN 237
Query: 225 GPTGQYRPGSP 257
P P SP
Sbjct: 238 SPNSPNSPNSP 248
Score = 26.6 bits (56), Expect = 8.8
Identities = 17/71 (23%), Positives = 24/71 (33%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQ 224
P +P + N P+ P+S N +S PN+ + P PN
Sbjct: 182 PNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNS-PNSPNSPNSPNSPNSPNSPN 240
Query: 225 GPTGQYRPGSP 257
P P SP
Sbjct: 241 SPNSPNSPNSP 251
Score = 26.6 bits (56), Expect = 8.8
Identities = 17/71 (23%), Positives = 24/71 (33%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQ 224
P +P + N P+ P+S N +S PN+ + P PN
Sbjct: 185 PNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNS-PNSPNSPNSPNSPNSPNSPN 243
Query: 225 GPTGQYRPGSP 257
P P SP
Sbjct: 244 SPNSPNSPNSP 254
Score = 26.6 bits (56), Expect = 8.8
Identities = 17/71 (23%), Positives = 24/71 (33%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQ 224
P +P + N P+ P+S N +S PN+ + P PN
Sbjct: 188 PNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNS-PNSPNSPNSPNSPNSPNSPN 246
Query: 225 GPTGQYRPGSP 257
P P SP
Sbjct: 247 SPNSPNSPNSP 257
Score = 26.6 bits (56), Expect = 8.8
Identities = 17/71 (23%), Positives = 24/71 (33%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQ 224
P +P + N P+ P+S N +S PN+ + P PN
Sbjct: 191 PNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNS-PNSPNSPNSPNSPNSPNSPN 249
Query: 225 GPTGQYRPGSP 257
P P SP
Sbjct: 250 SPNSPNSPNSP 260
Score = 26.6 bits (56), Expect = 8.8
Identities = 17/71 (23%), Positives = 24/71 (33%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQ 224
P +P + N P+ P+S N +S PN+ + P PN
Sbjct: 194 PNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNS-PNSPNSPNSPNSPNSPNSPN 252
Query: 225 GPTGQYRPGSP 257
P P SP
Sbjct: 253 SPNSPNSPNSP 263
Score = 26.6 bits (56), Expect = 8.8
Identities = 17/71 (23%), Positives = 24/71 (33%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQ 224
P +P + N P+ P+S N +S PN+ + P PN
Sbjct: 197 PNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNS-PNSPNSPNSPNSPNSPNSPN 255
Query: 225 GPTGQYRPGSP 257
P P SP
Sbjct: 256 SPNSPNSPNSP 266
Score = 26.6 bits (56), Expect = 8.8
Identities = 17/71 (23%), Positives = 24/71 (33%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQ 224
P +P + N P+ P+S N +S PN+ + P PN
Sbjct: 200 PNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNS-PNSPNSPNSPNSPNSPNSPN 258
Query: 225 GPTGQYRPGSP 257
P P SP
Sbjct: 259 SPNSPNSPNSP 269
Score = 26.6 bits (56), Expect = 8.8
Identities = 17/71 (23%), Positives = 24/71 (33%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQ 224
P +P + N P+ P+S N +S PN+ + P PN
Sbjct: 203 PNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNS-PNSPNSPNSPNSPNSPNSPN 261
Query: 225 GPTGQYRPGSP 257
P P SP
Sbjct: 262 SPNSPNSPNSP 272
>SB_31319| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1186
Score = 28.3 bits (60), Expect = 2.9
Identities = 26/92 (28%), Positives = 36/92 (39%), Gaps = 6/92 (6%)
Frame = +3
Query: 3 PGXQYGGGQSRNQEPGGQYAPGNQNIMQRPSGQYGPDSAVG---QGIQEPGNMYDSRPNN 173
P GG + P + N + + G GP+ G G+ P N RPN
Sbjct: 459 PNPGLGGPNQGLEGPNPGFVRPNPGLGRPNPGLGGPNPGFGGPNPGLGGP-NPGLGRPNQ 517
Query: 174 QSPQYGPGIGIGPNGLQGPT---GQYRPGSPE 260
+ PG+G GL GP G PG+P+
Sbjct: 518 GFGRPDPGLGGPNPGLGGPNPGLGGPNPGTPD 549
Score = 27.5 bits (58), Expect = 5.0
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Frame = +3
Query: 105 GPDSAVGQ---GIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQGPT-GQYRP 248
GP+ +G+ G++ P N+ RPN + PG+G GL+GP G RP
Sbjct: 430 GPNLGLGRPNPGLERP-NLGLWRPNPGFGRPNPGLGGPNQGLEGPNPGFVRP 480
>SB_6496| Best HMM Match : Collagen (HMM E-Value=0)
Length = 1234
Score = 28.3 bits (60), Expect = 2.9
Identities = 21/53 (39%), Positives = 23/53 (43%)
Frame = +3
Query: 90 PSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQGPTGQYRP 248
P G GP +G I +PG M S P GP GP G QG TG P
Sbjct: 487 PVGASGPTGGMGL-IGKPGEMGSSGP------AGPQGSAGPRGEQGFTGNPGP 532
>SB_53717| Best HMM Match : Furin-like (HMM E-Value=0.05)
Length = 1098
Score = 27.9 bits (59), Expect = 3.8
Identities = 19/69 (27%), Positives = 25/69 (36%)
Frame = +3
Query: 6 GXQYGGGQSRNQEPGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQ 185
G GGG R PGG + + + P G +G G G G +
Sbjct: 293 GRMQGGGMGRG--PGGGWGRMQGGMGRGPGGGWGRMQGGGMGRGPGGGLGRGPGGGWGRM 350
Query: 186 YGPGIGIGP 212
G G+G GP
Sbjct: 351 QGGGMGRGP 359
>SB_15585| Best HMM Match : Collagen (HMM E-Value=2.7e-12)
Length = 104
Score = 27.9 bits (59), Expect = 3.8
Identities = 17/56 (30%), Positives = 22/56 (39%)
Frame = +3
Query: 90 PSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQGPTGQYRPGSP 257
P+G GP G + G + P + GP GP G +G TG P P
Sbjct: 29 PTGPTGPTGPKG----DTGATGPTGPKGDTGATGPAGPTGPTGPKGDTGATGPAGP 80
Score = 27.5 bits (58), Expect = 5.0
Identities = 21/73 (28%), Positives = 25/73 (34%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQ 224
P G P P+G G A G G + P + GP GP G +
Sbjct: 32 PTGPTGPKGDTGATGPTGPKGDTGATGPA----GPTGPTGPKGDTGATGPAGPTGPTGPK 87
Query: 225 GPTGQYRPGSPEV 263
G TG P P V
Sbjct: 88 GDTGATGPLIPAV 100
>SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2201
Score = 27.9 bits (59), Expect = 3.8
Identities = 29/93 (31%), Positives = 35/93 (37%), Gaps = 6/93 (6%)
Frame = +3
Query: 3 PGXQYGGGQSRNQEPGGQYAPGNQNIMQRPSGQYGPDSAVG----QGIQEPGNMYDSRPN 170
PG Q G Q P G P + P G G + VG QG P + +
Sbjct: 510 PGIQGPQGLPGKQGPAG---PQGRQGASGPPGIPGLNGTVGPRGPQGFSGPRGLQGTPGQ 566
Query: 171 N--QSPQYGPGIGIGPNGLQGPTGQYRPGSPEV 263
N Q P GP +G N GP G P P+V
Sbjct: 567 NGLQGPP-GPQGPMGVNNSIGPPGPPGPQGPQV 598
>SB_13124| Best HMM Match : Collagen (HMM E-Value=2.3e-11)
Length = 476
Score = 27.9 bits (59), Expect = 3.8
Identities = 20/57 (35%), Positives = 24/57 (42%)
Frame = +3
Query: 138 EPGNMYDSRPNNQSPQYGPGIGIGPNGLQGPTGQYRPGSPEVKMLYQALEDNMVVLE 308
EPG P Q P G GP G+QGP G P P+ Q LE V++
Sbjct: 121 EPGPQ--GPPGPQGPTGAKG-DQGPEGIQGPQGIRGPEGPQGPQGPQGLEGKAGVVK 174
>SB_31570| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 124
Score = 27.5 bits (58), Expect = 5.0
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = -3
Query: 413 LDHIEFQELEFRFDHLDHIDY*DLEFHFDHLDHIEFQNHH 294
L +I + + + H D+I Y ++ + H D+I++ N H
Sbjct: 21 LYNIHYDNIHYDNIHYDNIHYDNIHYDNIHYDNIQYYNIH 60
>SB_9366| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1221
Score = 27.5 bits (58), Expect = 5.0
Identities = 22/61 (36%), Positives = 25/61 (40%)
Frame = +3
Query: 12 QYGGGQSRNQEPGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYG 191
QYG QSR P GQ+A + G Y PD + P M S P N P Y
Sbjct: 179 QYGS-QSR---PIGQHASQYSSSSTGFGGSYYPDGYQAMPPKSPAQMQGSYPGN-IPSYQ 233
Query: 192 P 194
P
Sbjct: 234 P 234
>SB_8802| Best HMM Match : WW (HMM E-Value=3.2e-31)
Length = 662
Score = 27.5 bits (58), Expect = 5.0
Identities = 25/72 (34%), Positives = 29/72 (40%), Gaps = 8/72 (11%)
Frame = +3
Query: 3 PGXQYGGGQSRNQEPG----GQYAPGNQNIMQRPSGQYGPDSAV----GQGIQEPGNMYD 158
PG Q Q +N PG GQ N Q P Q P+ GQ Q+PG
Sbjct: 278 PGQQVSR-QPQNAGPGQMQLGQQQVPNHQQSQHPGQQQPPNQQQPLYPGQQ-QQPGQQKP 335
Query: 159 SRPNNQSPQYGP 194
P Q+PQ GP
Sbjct: 336 IMPLMQAPQVGP 347
>SB_34344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 845
Score = 27.5 bits (58), Expect = 5.0
Identities = 19/53 (35%), Positives = 22/53 (41%)
Frame = +3
Query: 69 NQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQG 227
N N + G Y DS V +QE N +P PQ GP PNG G
Sbjct: 679 NYNASRESCGAYR-DSGVD--VQENENSPTHKPYRNGPQDGPSPDSFPNGQAG 728
>SB_37690| Best HMM Match : IgG_binding_B (HMM E-Value=4.2)
Length = 263
Score = 27.1 bits (57), Expect = 6.7
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = +3
Query: 129 GIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQGPTGQYRPGSP 257
G Q P + SRP GPG G GP GP +P P
Sbjct: 4 GQQAPMMIQVSRPGPNKGPPGPGPGPGPGPAPGPGPIVQPVVP 46
>SB_9863| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 27.1 bits (57), Expect = 6.7
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +3
Query: 90 PSGQYGPDSAVG-QGIQEP-GNMYDSRPNNQSPQYGPGIGIGPNGLQGPTG 236
P G+ G G QG Q P G+ + P GP +GP G +G +G
Sbjct: 468 PQGEQGLKGDPGPQGQQGPKGDQGEQGPKGSQGPQGPIGALGPRGPKGESG 518
>SB_51687| Best HMM Match : EMP70 (HMM E-Value=0)
Length = 392
Score = 27.1 bits (57), Expect = 6.7
Identities = 15/56 (26%), Positives = 30/56 (53%)
Frame = +1
Query: 4 PVXNMEVVKVGIKSPEVNMLLEIKTLCKGQVDSMDPIVLLDKVFKNQEICMILDQI 171
P+ + K+ +K E+N+ + LC ++ + V+ D++FK I M+LD +
Sbjct: 31 PIDYTQGQKLDVKV-EMNVNKKCVVLCPMKISADMSKVVADRIFKEYYIHMVLDNL 85
>SB_36462| Best HMM Match : efhand (HMM E-Value=5.8e-09)
Length = 402
Score = 27.1 bits (57), Expect = 6.7
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +3
Query: 102 YGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQGPTGQYRPG-SPEVKMLYQ 278
Y P QG + + Y + Q QYGP P PTG PG P + +Q
Sbjct: 52 YNPGYGGHQGYGQQPHGYGGQ---QYGQYGPPPSAYPGQFSAPTGGPPPGVDPSLWQWFQ 108
Query: 279 ALEDN 293
A++ +
Sbjct: 109 AVDQD 113
>SB_26832| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 27.1 bits (57), Expect = 6.7
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 207 GPNGLQGPTGQYRPGSP 257
GP G GP+G+Y PG P
Sbjct: 480 GPAGPPGPSGRYVPGPP 496
>SB_47949| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 280
Score = 26.6 bits (56), Expect = 8.8
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +3
Query: 153 YDSRPNNQSPQYGPGIGIGPNGLQGPTGQYRPG 251
+ S+PN+Q P P + P G+ P G PG
Sbjct: 199 FQSKPNSQMPPNAPPGLMPPPGMLPPPGGMPPG 231
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 26.6 bits (56), Expect = 8.8
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +3
Query: 96 GQYGPDSAV-GQGIQEPGN--MYDSRPNNQSPQYGPGIGIGPNGLQGPTGQYRPGSPEV 263
G GP S V G PG+ + S PNNQ P GPG + P + GP+ PG ++
Sbjct: 331 GPRGPPSGVPTSGGPPPGHQGLRPSGPNNQGPP-GPGPNMPP--VSGPSNP-APGGGDL 385
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 26.6 bits (56), Expect = 8.8
Identities = 29/76 (38%), Positives = 32/76 (42%), Gaps = 3/76 (3%)
Frame = +3
Query: 21 GGQSRNQEPGGQYAPGNQNIMQRPSGQYG-PDSAVGQGIQEPGNMYDSRPNNQSPQYGPG 197
G Q E G APG+Q P G G P A QG E G D P + PG
Sbjct: 3704 GAQGPRGEKGNTGAPGSQG-STGPRGPIGQPGMAGSQG--EKGGKGD-------PGF-PG 3752
Query: 198 IG--IGPNGLQGPTGQ 239
+ G GLQGP GQ
Sbjct: 3753 LPGQAGLRGLQGPEGQ 3768
>SB_2570| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 230
Score = 26.6 bits (56), Expect = 8.8
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = +3
Query: 96 GQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGLQGPTG 236
G +G G+ + N P + P GP GP G+QGP G
Sbjct: 44 GVHGKPGTPGKSGNDGRNGKPGAPGPKGPP-GPKGSRGPKGVQGPPG 89
>SB_1489| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.77)
Length = 872
Score = 26.6 bits (56), Expect = 8.8
Identities = 25/85 (29%), Positives = 28/85 (32%), Gaps = 2/85 (2%)
Frame = +3
Query: 6 GXQYGGGQSRNQEPGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQ 185
G GG + GG YA GN G Y + G G GN D N
Sbjct: 490 GYYAGGNYADGNYAGGNYADGNYAGGNYADGNYAGGNYAG-GYYTDGNYTDG--NYAGGN 546
Query: 186 YGPGIGIGPNGLQG--PTGQYRPGS 254
Y G G N G G Y G+
Sbjct: 547 YAGGNYAGGNYADGNYTGGNYAGGN 571
>SB_26266| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 1038
Score = 26.6 bits (56), Expect = 8.8
Identities = 9/40 (22%), Positives = 23/40 (57%)
Frame = -3
Query: 428 FHFVPLDHIEFQELEFRFDHLDHIDY*DLEFHFDHLDHIE 309
+ ++ H E++ +E+R+ +I+Y +E+ + +IE
Sbjct: 893 YRYIEYRHTEYRYIEYRYIKYRYIEYRYIEYRYIEYRYIE 932
Score = 26.6 bits (56), Expect = 8.8
Identities = 8/41 (19%), Positives = 25/41 (60%)
Frame = -3
Query: 428 FHFVPLDHIEFQELEFRFDHLDHIDY*DLEFHFDHLDHIEF 306
+ ++ +IE++ +E+R+ +I+Y +++ + +IE+
Sbjct: 913 YRYIEYRYIEYRYIEYRYIECRYIEYRYIKYRYIEYHYIEY 953
>SB_22789| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 796
Score = 26.6 bits (56), Expect = 8.8
Identities = 21/66 (31%), Positives = 25/66 (37%), Gaps = 5/66 (7%)
Frame = +3
Query: 45 PGGQYAPGNQNIMQRPSGQY-----GPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIG 209
PG Q + G + P +Y GP S PG Y SR S GP I
Sbjct: 226 PGSQSSEGPRTPSYVPGDEYRSPRRGPGSQSSVEDHRPGRGYGSRGGYASADEGPRTPI- 284
Query: 210 PNGLQG 227
NG+ G
Sbjct: 285 TNGMSG 290
>SB_21574| Best HMM Match : T-box (HMM E-Value=0)
Length = 473
Score = 26.6 bits (56), Expect = 8.8
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +3
Query: 24 GQSRNQEPG-GQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQS 179
G+S NQ Q N+++ + + Y P +G I + Y+ PNN S
Sbjct: 339 GRSTNQNTRCSQPISNNRSVTNQNTRYYEPIINIGSSINQNTRYYEQIPNNVS 391
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,271,135
Number of Sequences: 59808
Number of extensions: 248735
Number of successful extensions: 1940
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 1528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1820
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 834771332
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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