Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20147
         (436 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    29   0.054
AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    26   0.67 
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    26   0.67 
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    26   0.67 
AJ000502-1|CAA04136.1|  299|Anopheles gambiae iron regulatory pr...    25   1.2  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   2.0  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    23   3.6  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    23   4.7  
AY146748-1|AAO12063.1|  279|Anopheles gambiae odorant-binding pr...    23   4.7  
AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeo...    22   8.2  

>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 29.5 bits (63), Expect = 0.054
 Identities = 22/69 (31%), Positives = 27/69 (39%)
 Frame = +3

Query: 42  EPGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGL 221
           + G +  PG   I  +P G  GP  A G G   PG      P       GP    G +G 
Sbjct: 378 QSGPKGEPGRDGIPGQP-GIAGPAGAPGGGEGRPGAPGPKGPRGYEGPQGPKGMDGFDGE 436

Query: 222 QGPTGQYRP 248
           +G  GQ  P
Sbjct: 437 KGERGQMGP 445



 Score = 22.2 bits (45), Expect = 8.2
 Identities = 11/18 (61%), Positives = 12/18 (66%), Gaps = 1/18 (5%)
 Frame = +3

Query: 207 GPNGLQGPTG-QYRPGSP 257
           GP GLQGP G + R G P
Sbjct: 139 GPVGLQGPKGDRGRDGLP 156


>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 25.8 bits (54), Expect = 0.67
 Identities = 10/21 (47%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
 Frame = +2

Query: 179 SSIWTWNRNR-SERITRANWS 238
           +++W   +NR S R+TR NWS
Sbjct: 196 ATMWNIQKNRKSRRVTRHNWS 216


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 25.8 bits (54), Expect = 0.67
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +3

Query: 186 YGPGIGIGPNGLQGPTG 236
           YGPG   G  GL+GP G
Sbjct: 38  YGPGSNNGQEGLKGPGG 54


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 25.8 bits (54), Expect = 0.67
 Identities = 10/21 (47%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
 Frame = +2

Query: 179 SSIWTWNRNR-SERITRANWS 238
           +++W   +NR S R+TR NWS
Sbjct: 197 ATMWNIQKNRKSRRVTRHNWS 217


>AJ000502-1|CAA04136.1|  299|Anopheles gambiae iron regulatory
           protein protein.
          Length = 299

 Score = 25.0 bits (52), Expect = 1.2
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = +3

Query: 6   GXQYGGGQSRNQEPGGQYAPGNQNIMQRPSGQYGPDSAVGQGI 134
           G  YG G SR+    G Y  G + ++     +    + VG GI
Sbjct: 181 GKDYGSGSSRDWAAKGPYLLGIKAVIAESYERIHRSNLVGMGI 223


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.2 bits (50), Expect = 2.0
 Identities = 19/59 (32%), Positives = 28/59 (47%)
 Frame = +3

Query: 45  PGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQYGPGIGIGPNGL 221
           PGG  A G++   Q P+G  G     G G +E    ++SR  ++ PQ    +  GP  L
Sbjct: 512 PGGGRAEGDKVTFQIPNGGGG---GGGGGGREGSQEWNSR--SRPPQQHSMLRTGPKSL 565


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 23.4 bits (48), Expect = 3.6
 Identities = 16/53 (30%), Positives = 19/53 (35%)
 Frame = +3

Query: 24  GQSRNQEPGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSP 182
           G   N   GG   PGN N      G  G  S         GN  ++   NQ+P
Sbjct: 378 GYGNNHPTGGSNLPGNNN-----GGAGGGGSNTPSNHGALGNTQNNAGGNQTP 425


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 23.0 bits (47), Expect = 4.7
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +3

Query: 75  NIMQRPSGQYGPDSAVGQGIQEPGNMYDSR 164
           N++ RP+   GP+S+ G    EPG+  D++
Sbjct: 4   NVLVRPNDVPGPESSAG----EPGHGRDAQ 29


>AY146748-1|AAO12063.1|  279|Anopheles gambiae odorant-binding
           protein AgamOBP41 protein.
          Length = 279

 Score = 23.0 bits (47), Expect = 4.7
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 422 FVPLDHIEFQELEFR 378
           FVPLDH++ Q +  R
Sbjct: 152 FVPLDHLQLQHVTSR 166


>AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeotic
           protein protein.
          Length = 324

 Score = 22.2 bits (45), Expect = 8.2
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +3

Query: 84  QRPSGQYGPDSAVGQGIQEPGNMYDSRPNNQSPQY 188
           Q+P+  +     + QG Q P N  ++    QSP Y
Sbjct: 201 QQPNMMHQQPPPLHQGQQAPPNSQNASSGLQSPLY 235


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 428,492
Number of Sequences: 2352
Number of extensions: 8829
Number of successful extensions: 22
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 36142935
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)