Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20147
         (436 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       25   0.28 
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    24   0.64 
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    22   2.6  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   2.6  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   3.4  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   4.5  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     21   4.5  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 25.4 bits (53), Expect = 0.28
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = +3

Query: 171 NQSPQYGPGIGIGPNGLQGPTGQYRPGSP 257
           +QSPQ  P  G  PN  QGP     PG+P
Sbjct: 28  HQSPQ-APQRGSPPNPSQGPPPGGPPGAP 55


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 24.2 bits (50), Expect = 0.64
 Identities = 15/56 (26%), Positives = 23/56 (41%)
 Frame = +3

Query: 3   PGXQYGGGQSRNQEPGGQYAPGNQNIMQRPSGQYGPDSAVGQGIQEPGNMYDSRPN 170
           PG  YG   S+   P  ++ P N+  M R +  Y      G G+   G    + P+
Sbjct: 62  PGHHYGAAGSQQDMPYPRFPPYNRMDM-RNATYYQHQQDHGSGMDGMGGYRSASPS 116


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +2

Query: 185 IWTWNRNRSERITRA 229
           +++W +NRS RIT +
Sbjct: 219 VYSWEQNRSWRITHS 233


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = +3

Query: 141  PGNMYDSRPN--NQSPQYGPGIGIGPNGLQGPTGQYRPGSPEV 263
            PG   D++P    Q P   PG   GPNG++ P+  +  G P +
Sbjct: 1117 PGTA-DNKPQLKPQKPFTSPGGIPGPNGIKMPS--FMEGMPHL 1156


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = +1

Query: 148 ICMILDQIIKVLNMDLESESVRTDYKGQLVSIGLDLRRSKCCI 276
           I  I++  I+    D + ESV   ++  L    LD+R  K  I
Sbjct: 282 ISEIIETTIQEKRDDAKDESVEAIFQSILRQKNLDIRDKKAAI 324


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -3

Query: 170 IWSRIIHISWFLNT 129
           +WS + H++W L+T
Sbjct: 100 LWSLVPHMAWQLST 113


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 4/15 (26%), Positives = 9/15 (60%)
 Frame = +2

Query: 59  CSWKSKHYAKAKWTV 103
           C W  K + + +W++
Sbjct: 155 CKWSRKGFLRTRWSI 169


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,081
Number of Sequences: 438
Number of extensions: 2198
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11368164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)