Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20144
(507 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0) 35 0.044
SB_34870| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.077
SB_39834| Best HMM Match : Kazal_1 (HMM E-Value=0) 33 0.14
SB_39831| Best HMM Match : Kazal_1 (HMM E-Value=2.4e-19) 33 0.18
SB_5983| Best HMM Match : MIF4G (HMM E-Value=1.6) 31 0.55
SB_17350| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.72
SB_13882| Best HMM Match : GCC2_GCC3 (HMM E-Value=1.2e-13) 31 0.72
SB_10970| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_44384| Best HMM Match : Kazal_1 (HMM E-Value=1.4e-21) 29 1.7
SB_33512| Best HMM Match : Kazal_1 (HMM E-Value=2.6e-20) 29 2.2
SB_51028| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_35516| Best HMM Match : Kazal_1 (HMM E-Value=0) 29 2.9
SB_23967| Best HMM Match : SRCR (HMM E-Value=5.4e-11) 29 2.9
SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_8425| Best HMM Match : EGF (HMM E-Value=0) 28 3.8
SB_58026| Best HMM Match : ANF_receptor (HMM E-Value=0) 28 5.1
SB_36366| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_19761| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_46160| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_34796| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_25706| Best HMM Match : Mak16 (HMM E-Value=2.8) 27 6.7
SB_48390| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_58993| Best HMM Match : EGF_CA (HMM E-Value=0) 27 8.9
SB_21989| Best HMM Match : Spectrin (HMM E-Value=0) 27 8.9
SB_12451| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
>SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 2411
Score = 34.7 bits (76), Expect = 0.044
Identities = 22/59 (37%), Positives = 26/59 (44%), Gaps = 10/59 (16%)
Frame = +1
Query: 94 VCGTDYCE-KNPCIQPPLVCPKNTEHRARHAGKCACC---------PACVTLLGEGATC 240
VCG+D +N C L CPKN +H G CA C CVT L + A C
Sbjct: 1157 VCGSDKVSYRNKCYMIALNCPKNKYVYVKHEGYCAPCRLAECHKVYAKCVTTLYQTARC 1215
Score = 31.9 bits (69), Expect = 0.31
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = +1
Query: 88 ALVCGTD-YCEKNPCIQPPLVCPKNTEHRARHAGKCACCPACVTLLGE 228
A VCGTD + CI C R +HAG+C C V G+
Sbjct: 372 APVCGTDDRTYPSECIMKTSACADKKAVRVKHAGECGPCGTLVCTNGK 419
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/37 (35%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Frame = +1
Query: 94 VCGTDYCEK-NPCIQPPLVCPKNTEHRARHAGKCACC 201
VCGTD N C+ C K H G C C
Sbjct: 229 VCGTDKSSYLNECVMKARACRKEKSVTVAHRGFCGAC 265
>SB_34870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 248
Score = 33.9 bits (74), Expect = 0.077
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +2
Query: 71 RQQRTVLWYVVQTTVKKIHAYSHHLFALRTLSIAPD 178
R +R VLW V + ++ + A+S+ LF+L + + PD
Sbjct: 171 RSERRVLWDVASSKIRAVTAFSNSLFSLNSNAFCPD 206
>SB_39834| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 293
Score = 33.1 bits (72), Expect = 0.14
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 6/45 (13%)
Frame = +1
Query: 94 VCGTD-YCEKNPCIQPPLVCPKNTEHRARHAGKCA-----CCPAC 210
VCG+D NPC+ VC N + R +H G C C P C
Sbjct: 129 VCGSDGKTYDNPCVFKIAVCQMNGQLRLKHRGACGSRPDKCAPIC 173
Score = 32.7 bits (71), Expect = 0.18
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +1
Query: 94 VCGTDYCE-KNPCIQPPLVCPKNTEHRARHAGKCACCPACVTLLGEGA-TCKI 246
VCG+D NPC+ C N +H GKC +C +G CK+
Sbjct: 180 VCGSDNVTYSNPCMLRSATCKSNGTITMKHRGKCGSSQSCEQKKCKGTKVCKM 232
>SB_39831| Best HMM Match : Kazal_1 (HMM E-Value=2.4e-19)
Length = 173
Score = 32.7 bits (71), Expect = 0.18
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +1
Query: 94 VCGTDYCE-KNPCIQPPLVCPKNTEHRARHAGKCACCPACVTLLGEGA-TCKI 246
VCG+D NPC+ C N +H GKC +C +G CK+
Sbjct: 37 VCGSDNVTYSNPCMLRSATCKSNGTITMKHRGKCGSSQSCEQKKCKGTKVCKM 89
>SB_5983| Best HMM Match : MIF4G (HMM E-Value=1.6)
Length = 410
Score = 31.1 bits (67), Expect = 0.55
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = +2
Query: 56 WWHALRQQRTVLWYVVQTTVKKIHAYSHH 142
W HA R +VLW+++++ +KK++ + H
Sbjct: 135 WSHARRNFGSVLWWLLESRIKKVNKANRH 163
>SB_17350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2956
Score = 30.7 bits (66), Expect = 0.72
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +1
Query: 145 VCPKNTEHRARHAGKCACCPACVTLLG-EGATCK 243
+CP NT KC CPA ++ G +GAT K
Sbjct: 2764 LCPPNTYQDQEQQSKCHMCPAGLSTFGLQGATSK 2797
>SB_13882| Best HMM Match : GCC2_GCC3 (HMM E-Value=1.2e-13)
Length = 340
Score = 30.7 bits (66), Expect = 0.72
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +1
Query: 145 VCPKNTEHRARHAGKCACCPACVTLLG-EGATCK 243
+CP NT KC CPA ++ G +GAT K
Sbjct: 65 LCPPNTYQDQEQQSKCHMCPAGLSTFGLQGATSK 98
>SB_10970| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1256
Score = 29.9 bits (64), Expect = 1.3
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 4/61 (6%)
Frame = +1
Query: 61 ACVASAAYGALVCGTDYCEKNPCIQPPLVCPKNT-EHRARHAGKCACC---PACVTLLGE 228
+CV +A +G C C P+ C T + R+ CA PAC T LGE
Sbjct: 314 SCVCAAGWGGSTCSLPEC--------PITCTSGTCDLTVRYCSGCAAGFTGPACNTSLGE 365
Query: 229 G 231
G
Sbjct: 366 G 366
>SB_44384| Best HMM Match : Kazal_1 (HMM E-Value=1.4e-21)
Length = 85
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = +1
Query: 94 VCGTDYCE-KNPCIQPPLVCPKNTEHRARHAGKC 192
VCG+D NPC+ C N +H GKC
Sbjct: 51 VCGSDNVTYSNPCMLRSATCKSNGTITMKHRGKC 84
>SB_33512| Best HMM Match : Kazal_1 (HMM E-Value=2.6e-20)
Length = 87
Score = 29.1 bits (62), Expect = 2.2
Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = +1
Query: 94 VCGTDY-CEKNPCIQPPLVCPKNTEHRARHAGKCACCP 204
VCG+D N C+ C NT R G C CP
Sbjct: 10 VCGSDNNTYDNECLMRQQACVANTTVAVRRKGDCEPCP 47
>SB_51028| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 350
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/68 (22%), Positives = 28/68 (41%)
Frame = +3
Query: 264 ETPSAVCKEPLKCIKRVCTKLV*SFSLAGKYKLAILLSRSVRNIICVRNKIDNNMHCSKY 443
E + ++ LK + VC K + G + L ++ +V + N+H + Y
Sbjct: 246 EKKKTIFRDLLKLLDEVCKKAKCHVLIGGDFNLKYAIAETVVTEVVQERSNQYNLHTNGY 305
Query: 444 RNLKLKNM 467
+N K M
Sbjct: 306 QNKPRKKM 313
>SB_35516| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 320
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/38 (36%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Frame = +1
Query: 94 VCGTDY-CEKNPCIQPPLVCPKNTEHRARHAGKCACCP 204
VCGTD N C+ C N R G C CP
Sbjct: 172 VCGTDNNTYDNECLMRQQACVANATVAVRRKGHCEPCP 209
>SB_23967| Best HMM Match : SRCR (HMM E-Value=5.4e-11)
Length = 3369
Score = 28.7 bits (61), Expect = 2.9
Identities = 16/53 (30%), Positives = 19/53 (35%)
Frame = +1
Query: 124 PCIQPPLVCPKNTEHRARHAGKCACCPACVTLLGEGATCKIYSKN*AKPPPLC 282
P +PP C GKC C P C +G K + PPP C
Sbjct: 3183 PTTRPPCECKDGETGVLAEDGKCDCPPKC----DDGRKPKFVNNRWKCPPPEC 3231
>SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3261
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = +1
Query: 91 LVCGTDYCE-KNPCIQPPLVCPKNTEHRARHAGKCACC 201
LVCGTD N C+ C N+ + + G C C
Sbjct: 1519 LVCGTDNITYSNECLMKYQACRTNSALKVKRKGDCDVC 1556
Score = 27.1 bits (57), Expect = 8.9
Identities = 16/51 (31%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Frame = +1
Query: 94 VCGTDY-CEKNPCIQPPLVCPKNTEHRARHAGKCACCPACVTLLGEGATCK 243
VCG+D N C+ C NT R G C C +TCK
Sbjct: 1217 VCGSDNNTYDNECLMRQQACVANTTVAVRRKGDCDPCSNVTCDSPPYSTCK 1267
>SB_8425| Best HMM Match : EGF (HMM E-Value=0)
Length = 1955
Score = 28.3 bits (60), Expect = 3.8
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 130 IQPPLVCPKNTEHRARHAGKCACCPACVTLLGEGA 234
++P L CPK T A C+ CP + G GA
Sbjct: 390 VEPCLPCPKGTYQTAIGQMSCSECPGTKSTHGPGA 424
>SB_58026| Best HMM Match : ANF_receptor (HMM E-Value=0)
Length = 850
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/47 (31%), Positives = 18/47 (38%)
Frame = +1
Query: 100 GTDYCEKNPCIQPPLVCPKNTEHRARHAGKCACCPACVTLLGEGATC 240
GT E C L CP+ T R A C+ CP E +C
Sbjct: 506 GTMQSESVACCWECLQCPEGTVTSIRGATNCSTCPVTQKSNRERTSC 552
>SB_36366| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 27.9 bits (59), Expect = 5.1
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +3
Query: 429 HCSKYRNLKLKNMN 470
HCSKYRN+K K +N
Sbjct: 264 HCSKYRNIKQKYIN 277
>SB_19761| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 27.9 bits (59), Expect = 5.1
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -3
Query: 247 KSCKLHLHQVKLH-KRDNKHTFQRVWRDAQCS 155
K+ K H+ VK H KR N TF ++ QC+
Sbjct: 27 KTVKFHVFSVKFHEKRSNSTTFGQIPPSRQCT 58
>SB_46160| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1488
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 82 YGALVCGTDYCEKNPCIQPPLVCPKNTEHRARHAG 186
YG Y EK+P + PP V PK+ AR G
Sbjct: 884 YGKTFRLNGYNEKSPKVSPPPVKPKSYSPEARWCG 918
>SB_34796| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 27.5 bits (58), Expect = 6.7
Identities = 8/33 (24%), Positives = 17/33 (51%)
Frame = +3
Query: 6 EKRIQKFQNENVDFYNAGGMRCVSSVRCFGMWY 104
+ +Q+FQ +VD + C+ + C +W+
Sbjct: 53 DPNVQRFQRSSVDTFLVSSSLCLGDLCCIKLWH 85
>SB_25706| Best HMM Match : Mak16 (HMM E-Value=2.8)
Length = 405
Score = 27.5 bits (58), Expect = 6.7
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 6/47 (12%)
Frame = -3
Query: 283 HTAEGVSPSSSN------KSCKLHLHQVKLHKRDNKHTFQRVWRDAQ 161
HT +G S SS +SC LH L++RD+ T +++ R A+
Sbjct: 320 HTQKGESKRSSRIRTLNRRSCVFKLHYTNLNRRDDVETNKKLKRKAK 366
>SB_48390| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 121 NPCIQPPLVCPKNTEHRARHAGKCACCPACV 213
N C+ P L C N E+R R K CC + +
Sbjct: 162 NSCLNPFLYCLTNKEYR-REFTKLLCCKSAI 191
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 27.5 bits (58), Expect = 6.7
Identities = 21/66 (31%), Positives = 26/66 (39%), Gaps = 6/66 (9%)
Frame = +1
Query: 97 CGTDYCEKNPCIQPPLVCPKNTEHRARHAGKCACC----PA--CVTLLGEGATCKIYSKN 258
C + C KN PP+VCPK+ E CC PA C T+ K K
Sbjct: 1785 CPSTCCIKN---SPPVVCPKSCETTCTPDCPVMCCKNSSPATECPTICASKCISKCPEKC 1841
Query: 259 *AKPPP 276
+P P
Sbjct: 1842 CKQPEP 1847
>SB_58993| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 541
Score = 27.1 bits (57), Expect = 8.9
Identities = 22/95 (23%), Positives = 36/95 (37%), Gaps = 1/95 (1%)
Frame = +1
Query: 19 KNFKMKTLIFIMLVACVASAAYGALVCGTDYCEKNPCIQPPLVCPKNTEHRARHAGKCAC 198
K+ K ++ FIM C + + +KN C++ P +C T + G C
Sbjct: 237 KSCKKTSIYFIMFRYCQSLLSILCSAYTLCILDKNECVETPGIC--KTGNCTNIEGSYTC 294
Query: 199 -CPACVTLLGEGATCKIYSKN*AKPPPLCVRSLSN 300
CP + +C ++ K P LC N
Sbjct: 295 TCPVGYAPTRDSPSCSDINEC-KKNPELCPYGCKN 328
>SB_21989| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 1805
Score = 27.1 bits (57), Expect = 8.9
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -3
Query: 310 LLMHLRG-SLHTAEGVSPSSSNKSCKLHLHQVKLHKRD 200
LLM + G HT G+ SSS + K+H VK+ +++
Sbjct: 1067 LLMWMDGLESHTGFGIPASSSIQQMKVHFEHVKMCQKE 1104
>SB_12451| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 302
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 100 GTDYCEKNPCIQPPLVCPKNTE 165
G+ C + P IQPP VCP +E
Sbjct: 143 GSLCCARFPIIQPPSVCPALSE 164
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,676,297
Number of Sequences: 59808
Number of extensions: 334003
Number of successful extensions: 969
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 969
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1111677931
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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