Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20144
         (507 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      26   0.64 
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    24   2.6  
AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsi...    24   3.4  
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    23   4.5  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    23   4.5  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    23   4.5  
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    23   7.9  
AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykin...    23   7.9  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    23   7.9  

>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 26.2 bits (55), Expect = 0.64
 Identities = 17/58 (29%), Positives = 24/58 (41%)
 Frame = +1

Query: 133 QPPLVCPKNTEHRARHAGKCACCPACVTLLGEGATCKIYSKN*AKPPPLCVRSLSNAS 306
           +PPL  P +    A     C C    V LL  GA   +Y +   + P   + SL N +
Sbjct: 172 EPPLADPNSMHLFALTLSVCLCVGGLVVLL--GAFFWVYRRREKRKPAYLMNSLYNTT 227


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +1

Query: 148  CPKNTEHRA-RHAGKCACCPACVTLLGEGA 234
            C +  E++  RH G C  CPAC  L+ + A
Sbjct: 1016 CDRCKENKYDRHQG-CLDCPACYNLVQDAA 1044


>AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsive
           serine proteaselike protein protein.
          Length = 600

 Score = 23.8 bits (49), Expect = 3.4
 Identities = 19/64 (29%), Positives = 26/64 (40%)
 Frame = +1

Query: 49  IMLVACVASAAYGALVCGTDYCEKNPCIQPPLVCPKNTEHRARHAGKCACCPACVTLLGE 228
           I+LVA VA     A+    DY ++  C+           +RA +    A CP    L   
Sbjct: 4   IVLVALVAGCLLVAVAAQADYIQQEQCV--------TASNRAGYCTTKAECPDQEQLDLR 55

Query: 229 GATC 240
            ATC
Sbjct: 56  AATC 59


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = +1

Query: 31  MKTLIFIMLVACVASAAYGALV-CGTDYCEKNPCIQPPLVCP 153
           + TL  + LVA V S ++G L+ C +        + PP+V P
Sbjct: 552 LTTLFIVTLVANV-STSFGYLISCASSSISMALSVGPPVVIP 592


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = +1

Query: 31  MKTLIFIMLVACVASAAYGALV-CGTDYCEKNPCIQPPLVCP 153
           + TL  + LVA V S ++G L+ C +        + PP+V P
Sbjct: 552 LTTLFIVTLVANV-STSFGYLISCASSSISMALSVGPPVVIP 592


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = +1

Query: 31  MKTLIFIMLVACVASAAYGALV-CGTDYCEKNPCIQPPLVCP 153
           + TL  + LVA V S ++G L+ C +        + PP+V P
Sbjct: 530 LTTLFIVTLVANV-STSFGYLISCASSSISMALSVGPPVVIP 570


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = -3

Query: 265 SPSSSNKSCKLHLHQVKLHKRDNKHTFQRV 176
           +P+S +   K H+  V+L +R +K     V
Sbjct: 375 TPTSDSSERKAHIQDVELKERSSKSLLANV 404


>AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykinin
           receptor protein.
          Length = 450

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 181 AGKCACCPACVTLLGEG 231
           AG  +CCPA   L G G
Sbjct: 19  AGTSSCCPAGTGLNGSG 35


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = -3

Query: 406 RTQIIFRTDRDRSIASLYFPANENDYTSLVQTLLMHLRGS 287
           R +   +  +    A L   A EN+     Q +L HLRGS
Sbjct: 353 RLEKAIKVGKRAEFAKLIDIAEENELGVGYQVVLSHLRGS 392


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 544,071
Number of Sequences: 2352
Number of extensions: 11589
Number of successful extensions: 17
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 45668772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)