Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20144
         (507 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92833-7|CAB07381.1|  825|Caenorhabditis elegans Hypothetical pr...    32   0.27 
Z92833-6|CAB07380.1|  823|Caenorhabditis elegans Hypothetical pr...    32   0.27 
AL023842-9|CAA19521.1|  825|Caenorhabditis elegans Hypothetical ...    32   0.27 
AL023842-8|CAA19520.1|  823|Caenorhabditis elegans Hypothetical ...    32   0.27 
Z95559-9|CAI46625.1|  510|Caenorhabditis elegans Hypothetical pr...    30   1.1  
Z92804-2|CAB07253.2|  321|Caenorhabditis elegans Hypothetical pr...    29   1.5  
U39644-2|AAA80360.2|  966|Caenorhabditis elegans Hypothetical pr...    29   1.9  
Z82083-2|CAB04970.1|  263|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z68296-6|CAE17754.1|  195|Caenorhabditis elegans Hypothetical pr...    27   5.9  
Z73971-10|CAA98251.1|  838|Caenorhabditis elegans Hypothetical p...    27   7.8  
AF016427-10|AAB65348.1|  301|Caenorhabditis elegans Hypothetical...    27   7.8  

>Z92833-7|CAB07381.1|  825|Caenorhabditis elegans Hypothetical
           protein F38A6.3b protein.
          Length = 825

 Score = 31.9 bits (69), Expect = 0.27
 Identities = 18/58 (31%), Positives = 31/58 (53%)
 Frame = -3

Query: 352 FPANENDYTSLVQTLLMHLRGSLHTAEGVSPSSSNKSCKLHLHQVKLHKRDNKHTFQR 179
           F  + N Y+S V TL+ HL+ + H  E    + ++ S KLHL  +K+     ++  +R
Sbjct: 60  FRKSINSYSSKV-TLIAHLKVARHYGEVAPITPTSASLKLHLFTIKMEDNRKRNMERR 116


>Z92833-6|CAB07380.1|  823|Caenorhabditis elegans Hypothetical
           protein F38A6.3a protein.
          Length = 823

 Score = 31.9 bits (69), Expect = 0.27
 Identities = 18/58 (31%), Positives = 31/58 (53%)
 Frame = -3

Query: 352 FPANENDYTSLVQTLLMHLRGSLHTAEGVSPSSSNKSCKLHLHQVKLHKRDNKHTFQR 179
           F  + N Y+S V TL+ HL+ + H  E    + ++ S KLHL  +K+     ++  +R
Sbjct: 60  FRKSINSYSSKV-TLIAHLKVARHYGEVAPITPTSASLKLHLFTIKMEDNRKRNMERR 116


>AL023842-9|CAA19521.1|  825|Caenorhabditis elegans Hypothetical
           protein F38A6.3b protein.
          Length = 825

 Score = 31.9 bits (69), Expect = 0.27
 Identities = 18/58 (31%), Positives = 31/58 (53%)
 Frame = -3

Query: 352 FPANENDYTSLVQTLLMHLRGSLHTAEGVSPSSSNKSCKLHLHQVKLHKRDNKHTFQR 179
           F  + N Y+S V TL+ HL+ + H  E    + ++ S KLHL  +K+     ++  +R
Sbjct: 60  FRKSINSYSSKV-TLIAHLKVARHYGEVAPITPTSASLKLHLFTIKMEDNRKRNMERR 116


>AL023842-8|CAA19520.1|  823|Caenorhabditis elegans Hypothetical
           protein F38A6.3a protein.
          Length = 823

 Score = 31.9 bits (69), Expect = 0.27
 Identities = 18/58 (31%), Positives = 31/58 (53%)
 Frame = -3

Query: 352 FPANENDYTSLVQTLLMHLRGSLHTAEGVSPSSSNKSCKLHLHQVKLHKRDNKHTFQR 179
           F  + N Y+S V TL+ HL+ + H  E    + ++ S KLHL  +K+     ++  +R
Sbjct: 60  FRKSINSYSSKV-TLIAHLKVARHYGEVAPITPTSASLKLHLFTIKMEDNRKRNMERR 116


>Z95559-9|CAI46625.1|  510|Caenorhabditis elegans Hypothetical
           protein Y41E3.18 protein.
          Length = 510

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +1

Query: 154 KNTEHRARHAGKCACCPACVTLLGEGA 234
           K T HR +H    ACCP C  ++   A
Sbjct: 147 KGTWHRVKHVVFVACCPPCCCIIQRSA 173


>Z92804-2|CAB07253.2|  321|Caenorhabditis elegans Hypothetical
           protein K05D4.3 protein.
          Length = 321

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 10/33 (30%), Positives = 24/33 (72%)
 Frame = -3

Query: 397 IIFRTDRDRSIASLYFPANENDYTSLVQTLLMH 299
           ++FR++R R  ++  FP  ++ Y+++V+T ++H
Sbjct: 47  VVFRSNRQRDRSTPIFPIIKHFYSTVVRTYILH 79


>U39644-2|AAA80360.2|  966|Caenorhabditis elegans Hypothetical
           protein T10E10.4 protein.
          Length = 966

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 18/52 (34%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
 Frame = +1

Query: 100 GTDYCEKNPCIQPPLVCPKNTEHRARHAGKCA-CCPACVTLLGEGATCKIYS 252
           G D C    C   P  CP N     R +G C  CCP   T +  G  C + S
Sbjct: 530 GVD-CNNGACCPLP-TCPNNIASSQRCSGGCTNCCPVGQTCM-NGGCCDLPS 578


>Z82083-2|CAB04970.1|  263|Caenorhabditis elegans Hypothetical
           protein ZK1010.4 protein.
          Length = 263

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
 Frame = +1

Query: 37  TLIFIMLVA--CVASAAYGALVCGTDYCEKNPCI 132
           T IF++LVA   V  A   + VCG+ YC   P +
Sbjct: 5   TTIFLVLVAGAVVTEACLSSGVCGSSYCAAPPAV 38


>Z68296-6|CAE17754.1|  195|Caenorhabditis elegans Hypothetical
           protein C46C2.6a protein.
          Length = 195

 Score = 27.5 bits (58), Expect = 5.9
 Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +1

Query: 148 CPKNTEHRARHAGKCACCPACVTLLGEGATC-KIYS 252
           CP + +   +H+G+CA   AC+     G  C K++S
Sbjct: 60  CPSDYDFIRQHSGRCADGTACIPDSSFGEPCIKLFS 95


>Z73971-10|CAA98251.1|  838|Caenorhabditis elegans Hypothetical
           protein C50H2.3 protein.
          Length = 838

 Score = 27.1 bits (57), Expect = 7.8
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 64  CVASAAYGALVCGTDYCEKNPCI 132
           C  +A +G   C    CE NPC+
Sbjct: 623 CFCAAGFGGPKCDQRPCESNPCL 645


>AF016427-10|AAB65348.1|  301|Caenorhabditis elegans Hypothetical
           protein F32D1.7 protein.
          Length = 301

 Score = 27.1 bits (57), Expect = 7.8
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -3

Query: 280 TAEGVSPSSSNKSCKLHLHQVKLHKR 203
           + +GVSPS ++K  K   HQ  LH +
Sbjct: 217 STQGVSPSRTSKISKKKAHQAGLHSK 242


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,906,075
Number of Sequences: 27780
Number of extensions: 257088
Number of successful extensions: 682
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 682
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)