Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20142
(515 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA... 30 1.6
AY058544-1|AAL13773.1| 560|Drosophila melanogaster LD24478p pro... 29 4.9
AE014298-2788|AAF48903.1| 560|Drosophila melanogaster CG7332-PA... 29 4.9
AE014296-1900|AAF50099.2| 109|Drosophila melanogaster CG32073-P... 28 6.5
L04960-2|AAF01347.1| 2711|Drosophila melanogaster fat facets sho... 28 8.6
L04960-1|AAF01348.1| 2747|Drosophila melanogaster fat facets lon... 28 8.6
L04959-1|AAF01345.1| 2747|Drosophila melanogaster fat facets lon... 28 8.6
L04958-1|AAF01346.1| 2711|Drosophila melanogaster fat facets sho... 28 8.6
AE014297-4810|AAN14291.1| 2711|Drosophila melanogaster CG1945-PC... 28 8.6
AE014297-4809|AAF57198.1| 2778|Drosophila melanogaster CG1945-PA... 28 8.6
>AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA
protein.
Length = 2284
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -3
Query: 333 YRGSTF*QCAVRCRPTACSSTPWCSDSVND 244
Y GST +C R RPT +S P CS D
Sbjct: 499 YPGSTDPECQPRTRPTITTSQPRCSQGSTD 528
>AY058544-1|AAL13773.1| 560|Drosophila melanogaster LD24478p
protein.
Length = 560
Score = 28.7 bits (61), Expect = 4.9
Identities = 20/62 (32%), Positives = 28/62 (45%)
Frame = +2
Query: 38 SGCSCRACSPXAPASLKCXR*A*AXLTKNSRRNCTTASSPVTTTALSVRAWNTRTKARAP 217
S S ++ + A AS A A L + TTASS T+ S A ++ A AP
Sbjct: 17 SSVSAKSATAAASASTASMTFASAALESHKTTTITTASSSPRTSGASASASSSSRSASAP 76
Query: 218 SS 223
+S
Sbjct: 77 AS 78
>AE014298-2788|AAF48903.1| 560|Drosophila melanogaster CG7332-PA
protein.
Length = 560
Score = 28.7 bits (61), Expect = 4.9
Identities = 20/62 (32%), Positives = 28/62 (45%)
Frame = +2
Query: 38 SGCSCRACSPXAPASLKCXR*A*AXLTKNSRRNCTTASSPVTTTALSVRAWNTRTKARAP 217
S S ++ + A AS A A L + TTASS T+ S A ++ A AP
Sbjct: 17 SSVSAKSATAAASASTASMTFASAALESHKTTTITTASSSPRTSGASASASSSSRSASAP 76
Query: 218 SS 223
+S
Sbjct: 77 AS 78
>AE014296-1900|AAF50099.2| 109|Drosophila melanogaster CG32073-PA
protein.
Length = 109
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/50 (30%), Positives = 21/50 (42%)
Frame = +1
Query: 205 GKGSXXXXXXXXXXXDGVGTPWSTATSCGSATDSTLSESTSPITLDSSWP 354
G GS G GT T T G+ T +TL+ +T+ T + P
Sbjct: 33 GSGSSSASGSGSSSGSGTGTGTGTGTGTGTGTSTTLAPTTTTTTTTTVAP 82
>L04960-2|AAF01347.1| 2711|Drosophila melanogaster fat facets short
isoform protein.
Length = 2711
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 259 GTPWSTATSCGSATDSTLSESTSP 330
G P STA S S+T ST + +TSP
Sbjct: 11 GQPGSTAPSSSSSTTSTTTTTTSP 34
>L04960-1|AAF01348.1| 2747|Drosophila melanogaster fat facets long
isoform protein.
Length = 2747
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 259 GTPWSTATSCGSATDSTLSESTSP 330
G P STA S S+T ST + +TSP
Sbjct: 11 GQPGSTAPSSSSSTTSTTTTTTSP 34
>L04959-1|AAF01345.1| 2747|Drosophila melanogaster fat facets long
isoform protein.
Length = 2747
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 259 GTPWSTATSCGSATDSTLSESTSP 330
G P STA S S+T ST + +TSP
Sbjct: 11 GQPGSTAPSSSSSTTSTTTTTTSP 34
>L04958-1|AAF01346.1| 2711|Drosophila melanogaster fat facets short
isoform protein.
Length = 2711
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 259 GTPWSTATSCGSATDSTLSESTSP 330
G P STA S S+T ST + +TSP
Sbjct: 11 GQPGSTAPSSSSSTTSTTTTTTSP 34
>AE014297-4810|AAN14291.1| 2711|Drosophila melanogaster CG1945-PC,
isoform C protein.
Length = 2711
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 259 GTPWSTATSCGSATDSTLSESTSP 330
G P STA S S+T ST + +TSP
Sbjct: 11 GQPGSTAPSSSSSTTSTTTTTTSP 34
>AE014297-4809|AAF57198.1| 2778|Drosophila melanogaster CG1945-PA,
isoform A protein.
Length = 2778
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 259 GTPWSTATSCGSATDSTLSESTSP 330
G P STA S S+T ST + +TSP
Sbjct: 11 GQPGSTAPSSSSSTTSTTTTTTSP 34
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.309 0.125 0.365
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,238,274
Number of Sequences: 53049
Number of extensions: 397678
Number of successful extensions: 986
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 982
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1887744768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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