Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20139
(700 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 25 0.79
AY600515-1|AAT11863.1| 134|Tribolium castaneum optomotor-blind-... 24 1.0
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 24 1.0
AM292344-1|CAL23156.1| 291|Tribolium castaneum gustatory recept... 23 2.4
EU019710-1|ABU25222.1| 475|Tribolium castaneum dopa decarboxyla... 23 3.2
AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like prote... 23 3.2
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 23 3.2
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 23 3.2
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 23 3.2
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 23 3.2
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 23 3.2
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 23 3.2
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 23 3.2
AM292339-1|CAL23151.2| 387|Tribolium castaneum gustatory recept... 22 5.5
AM292338-1|CAL23150.2| 372|Tribolium castaneum gustatory recept... 22 5.5
AY600516-1|AAT11864.1| 143|Tribolium castaneum optomotor-blind-... 21 7.3
AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin pr... 21 7.3
AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin pr... 21 7.3
AF506021-1|AAM46897.1| 64|Tribolium castaneum polyubiquitin pr... 21 7.3
AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin pr... 21 7.3
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 21 9.7
AM292359-1|CAL23171.2| 436|Tribolium castaneum gustatory recept... 21 9.7
AM292356-1|CAL23168.2| 251|Tribolium castaneum gustatory recept... 21 9.7
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 24.6 bits (51), Expect = 0.79
Identities = 19/77 (24%), Positives = 30/77 (38%)
Frame = +3
Query: 300 PNYSQSQASVTPAAFPTTAPNLVPTFDMSNFAATPIQPPPISTGVSVVTPVSLPGMPSIT 479
PN ++ A T++ + D+S A P PP+ST + S ++
Sbjct: 89 PNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLS 148
Query: 480 VSATLPVSTIKKFTSNN 530
VS + P TS N
Sbjct: 149 VSTSPPGKPATSTTSQN 165
>AY600515-1|AAT11863.1| 134|Tribolium castaneum
optomotor-blind-like protein protein.
Length = 134
Score = 24.2 bits (50), Expect = 1.0
Identities = 11/38 (28%), Positives = 15/38 (39%)
Frame = +2
Query: 8 QWLPLEISHLRISLMNNICSIHXXXXXXXXXXXQPNSH 121
QW+ +S ++ L NNI H QP H
Sbjct: 66 QWMQKVVSFHKLKLTNNISDKHGFTILNSMHKYQPRFH 103
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 24.2 bits (50), Expect = 1.0
Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Frame = +3
Query: 273 QPQPYIP---MMPNYSQSQASVTPAAFPTTAPNLVPTFDMSNFAATPIQPPPIST 428
QPQ P PN ++ A T++ + D+S A P PP+ST
Sbjct: 77 QPQRLAPTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRSTPPLST 131
>AM292344-1|CAL23156.1| 291|Tribolium castaneum gustatory receptor
candidate 23 protein.
Length = 291
Score = 23.0 bits (47), Expect = 2.4
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = -2
Query: 582 INKLTIFHDNKSCFWCNDCC 523
+ LT + N+ +W N CC
Sbjct: 43 LTNLTYNNTNRKYYWLNVCC 62
>EU019710-1|ABU25222.1| 475|Tribolium castaneum dopa decarboxylase
protein.
Length = 475
Score = 22.6 bits (46), Expect = 3.2
Identities = 9/21 (42%), Positives = 15/21 (71%), Gaps = 2/21 (9%)
Frame = +2
Query: 602 IHLLA--LNDIYFIKLMKCSK 658
IHL+ + D+YF++L CS+
Sbjct: 431 IHLVPSKIRDVYFLRLAICSR 451
>AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like protein
protein.
Length = 314
Score = 22.6 bits (46), Expect = 3.2
Identities = 22/84 (26%), Positives = 28/84 (33%)
Frame = +3
Query: 246 AQSPGMPMNQPQPYIPMMPNYSQSQASVTPAAFPTTAPNLVPTFDMSNFAATPIQPPPIS 425
A+SPG ++ P N S S+T +T L F + P S
Sbjct: 15 ARSPGGDHSENMQDEP--ENLSNKSNSITVPLSISTGQRLPANFSFGQVNSPPSSTSSGS 72
Query: 426 TGVSVVTPVSLPGMPSITVSATLP 497
G TPV P S LP
Sbjct: 73 LGQFPATPVIDPAKDPAIYSNLLP 96
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.6 bits (46), Expect = 3.2
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +3
Query: 300 PNYSQSQASVTPAAFPTTAPNLVPTFDMSNFAATPIQPPPIST 428
PN ++ A T++ + D+S A P PP+ST
Sbjct: 89 PNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRSTPPLST 131
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 22.6 bits (46), Expect = 3.2
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +3
Query: 300 PNYSQSQASVTPAAFPTTAPNLVPTFDMSNFAATPIQPPPIST 428
PN ++ A T++ + D+S A P PP+ST
Sbjct: 89 PNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRSTPPLST 131
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.6 bits (46), Expect = 3.2
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +3
Query: 300 PNYSQSQASVTPAAFPTTAPNLVPTFDMSNFAATPIQPPPIST 428
PN ++ A T++ + D+S A P PP+ST
Sbjct: 89 PNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRSTPPLST 131
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 22.6 bits (46), Expect = 3.2
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +3
Query: 300 PNYSQSQASVTPAAFPTTAPNLVPTFDMSNFAATPIQPPPIST 428
PN ++ A T++ + D+S A P PP+ST
Sbjct: 89 PNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRSTPPLST 131
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 22.6 bits (46), Expect = 3.2
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +3
Query: 300 PNYSQSQASVTPAAFPTTAPNLVPTFDMSNFAATPIQPPPIST 428
PN ++ A T++ + D+S A P PP+ST
Sbjct: 45 PNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRSTPPLST 87
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 22.6 bits (46), Expect = 3.2
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +3
Query: 300 PNYSQSQASVTPAAFPTTAPNLVPTFDMSNFAATPIQPPPIST 428
PN ++ A T++ + D+S A P PP+ST
Sbjct: 89 PNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRSTPPLST 131
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 22.6 bits (46), Expect = 3.2
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +3
Query: 300 PNYSQSQASVTPAAFPTTAPNLVPTFDMSNFAATPIQPPPIST 428
PN ++ A T++ + D+S A P PP+ST
Sbjct: 89 PNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRSTPPLST 131
>AM292339-1|CAL23151.2| 387|Tribolium castaneum gustatory receptor
candidate 18 protein.
Length = 387
Score = 21.8 bits (44), Expect = 5.5
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -3
Query: 341 SSWSHRSLRLTIIWHHWY 288
S+WS +S ++ HWY
Sbjct: 151 STWSKKSKQVEYFLIHWY 168
>AM292338-1|CAL23150.2| 372|Tribolium castaneum gustatory receptor
candidate 17 protein.
Length = 372
Score = 21.8 bits (44), Expect = 5.5
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -3
Query: 341 SSWSHRSLRLTIIWHHWY 288
S+WS +S ++ HWY
Sbjct: 151 STWSKKSKQVEYFLIHWY 168
>AY600516-1|AAT11864.1| 143|Tribolium castaneum
optomotor-blind-like protein protein.
Length = 143
Score = 21.4 bits (43), Expect = 7.3
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +2
Query: 8 QWLPLEISHLRISLMNNICSIH 73
QW+ +S ++ L NNI H
Sbjct: 66 QWMQKVVSFHKLKLTNNISDKH 87
>AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin
protein.
Length = 76
Score = 21.4 bits (43), Expect = 7.3
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 345 GKQLESQKPETDYNL 301
GKQLE + +DYN+
Sbjct: 47 GKQLEDGRTLSDYNI 61
>AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin
protein.
Length = 685
Score = 21.4 bits (43), Expect = 7.3
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 345 GKQLESQKPETDYNL 301
GKQLE + +DYN+
Sbjct: 47 GKQLEDGRTLSDYNI 61
Score = 21.4 bits (43), Expect = 7.3
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 345 GKQLESQKPETDYNL 301
GKQLE + +DYN+
Sbjct: 123 GKQLEDGRTLSDYNI 137
Score = 21.4 bits (43), Expect = 7.3
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 345 GKQLESQKPETDYNL 301
GKQLE + +DYN+
Sbjct: 199 GKQLEDGRTLSDYNI 213
Score = 21.4 bits (43), Expect = 7.3
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 345 GKQLESQKPETDYNL 301
GKQLE + +DYN+
Sbjct: 275 GKQLEDGRTLSDYNI 289
Score = 21.4 bits (43), Expect = 7.3
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 345 GKQLESQKPETDYNL 301
GKQLE + +DYN+
Sbjct: 351 GKQLEDGRTLSDYNI 365
Score = 21.4 bits (43), Expect = 7.3
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 345 GKQLESQKPETDYNL 301
GKQLE + +DYN+
Sbjct: 427 GKQLEDGRTLSDYNI 441
Score = 21.4 bits (43), Expect = 7.3
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 345 GKQLESQKPETDYNL 301
GKQLE + +DYN+
Sbjct: 503 GKQLEDGRTLSDYNI 517
Score = 21.4 bits (43), Expect = 7.3
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 345 GKQLESQKPETDYNL 301
GKQLE + +DYN+
Sbjct: 579 GKQLEDGRTLSDYNI 593
Score = 21.4 bits (43), Expect = 7.3
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 345 GKQLESQKPETDYNL 301
GKQLE + +DYN+
Sbjct: 655 GKQLEDGRTLSDYNI 669
>AF506021-1|AAM46897.1| 64|Tribolium castaneum polyubiquitin
protein.
Length = 64
Score = 21.4 bits (43), Expect = 7.3
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 345 GKQLESQKPETDYNL 301
GKQLE + +DYN+
Sbjct: 47 GKQLEDGRTLSDYNI 61
>AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin
protein.
Length = 112
Score = 21.4 bits (43), Expect = 7.3
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 345 GKQLESQKPETDYNL 301
GKQLE + +DYN+
Sbjct: 19 GKQLEDGRTLSDYNI 33
Score = 21.4 bits (43), Expect = 7.3
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 345 GKQLESQKPETDYNL 301
GKQLE + +DYN+
Sbjct: 95 GKQLEDGRTLSDYNI 109
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 21.0 bits (42), Expect = 9.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 208 IPSVSSMQPPAPLPS 252
I +S M PPAPL S
Sbjct: 528 IDEISYMAPPAPLIS 542
>AM292359-1|CAL23171.2| 436|Tribolium castaneum gustatory receptor
candidate 38 protein.
Length = 436
Score = 21.0 bits (42), Expect = 9.7
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -1
Query: 472 EGIPGNETGVTTDTP 428
E P N T +TT TP
Sbjct: 421 EASPTNSTTITTQTP 435
>AM292356-1|CAL23168.2| 251|Tribolium castaneum gustatory receptor
candidate 35 protein.
Length = 251
Score = 21.0 bits (42), Expect = 9.7
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +2
Query: 149 LTWLHILVILQMQH*LNLEAYHQYLV 226
L W +I + + ++LE YH Y V
Sbjct: 3 LKWYYITISMAFIIFVSLEIYHIYTV 28
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,423
Number of Sequences: 336
Number of extensions: 3967
Number of successful extensions: 32
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -