Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20139
(700 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 39 6e-04
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 34 0.017
SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large subunit|... 33 0.039
SPBC17D11.02c |||synoviolin homolog|Schizosaccharomyces pombe|ch... 32 0.091
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 31 0.16
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.21
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.21
SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr... 30 0.37
SPBC23G7.08c |rga7||GTPase activating protein Rga7|Schizosacchar... 29 0.64
SPBC543.07 |pek1|skh1, mkk1|MAP kinase kinase Pek1 |Schizosaccha... 29 0.64
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 29 0.64
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 29 0.85
SPBC3B8.03 |||saccharopine dehydrogenase |Schizosaccharomyces po... 29 0.85
SPBC887.10 |mcs4||two-component response regulator |Schizosaccha... 29 0.85
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 28 1.1
SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces po... 28 1.5
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 28 1.5
SPBP16F5.08c |||flavin dependent monooxygenase |Schizosaccharomy... 28 1.5
SPAC1A6.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 27 2.0
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 27 2.0
SPAC3G9.14 |sak1||transcriptional repressor Sak1|Schizosaccharom... 27 2.6
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 2.6
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 27 3.4
SPBC725.16 |res1|sct1|MBF transcription factor complex subunit R... 27 3.4
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 27 3.4
SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces... 27 3.4
SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|ch... 27 3.4
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 27 3.4
SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomy... 26 6.0
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 26 6.0
SPCC70.10 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||M... 26 6.0
SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyce... 26 6.0
SPBC146.09c |lsd1|swm1, saf110|histone demethylase SWIRM1|Schizo... 23 7.2
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 25 7.9
SPBC582.10c |||ATP-dependent DNA helicase Rhp16b |Schizosaccharo... 25 7.9
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 39.1 bits (87), Expect = 6e-04
Identities = 31/110 (28%), Positives = 42/110 (38%), Gaps = 2/110 (1%)
Frame = +3
Query: 228 AASSTTAQSPGMPMNQPQPYIPMMPNYSQSQASVTP--AAFPTTAPNLVPTFDMSNFAAT 401
+ S TT+ S N P P +P S S S P A+ +T + P S T
Sbjct: 282 STSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLPSTSTSCTT 341
Query: 402 PIQPPPISTGVSVVTPVSLPGMPSITVSATLPVSTIKKFTSNNHYTKSKT 551
PP + VTP P S T + P ST TS++ + T
Sbjct: 342 STSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLLSTST 391
Score = 36.3 bits (80), Expect = 0.004
Identities = 28/110 (25%), Positives = 43/110 (39%), Gaps = 2/110 (1%)
Frame = +3
Query: 228 AASSTTAQSPGMPMNQPQPYIPMMPNYSQSQASVT--PAAFPTTAPNLVPTFDMSNFAAT 401
+ +++T+ G + P P +P S S S+ P + +T N P S T
Sbjct: 228 SCTTSTSIPTGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPTTSTSCTT 287
Query: 402 PIQPPPISTGVSVVTPVSLPGMPSITVSATLPVSTIKKFTSNNHYTKSKT 551
PP + VTP P S T + P ST TS++ + T
Sbjct: 288 STSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLPSTST 337
Score = 35.9 bits (79), Expect = 0.006
Identities = 29/102 (28%), Positives = 39/102 (38%), Gaps = 3/102 (2%)
Frame = +3
Query: 228 AASSTTAQSPGMPMNQPQPYIPMMPNYSQSQASVTP--AAFPTTAPNLVPTFDMSNFAAT 401
+ S TT+ S N P P +P S S S P A+ +T + P S T
Sbjct: 336 STSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLLSTSTSCTT 395
Query: 402 PIQPPPISTGVSVVTPVSLPGMPSITVSAT-LPVSTIKKFTS 524
PP + VTP P S ++ T ST +TS
Sbjct: 396 STSIPPTGNSTTPVTPTVPPTSSSTPLTTTNCTTSTSVPYTS 437
Score = 34.7 bits (76), Expect = 0.013
Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
Frame = +3
Query: 234 SSTTAQSPGMPMNQPQPYIPMMPNYSQSQASVT--PAAFPTTAPNLVPTFDMSNFAATPI 407
+ST+ G + P P +P S S S+ P + +T N P S T
Sbjct: 117 TSTSIPPTGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSNPLPTTSTSCTTST 176
Query: 408 QPPPISTGVSVVTPVSLPGMPSITVSATLPV 500
PP S+ TP++ P+ T S ++P+
Sbjct: 177 SIPPTGGSSSLSTPITPTVPPTSTSSTSIPI 207
Score = 29.1 bits (62), Expect = 0.64
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
Frame = +3
Query: 300 PNYSQSQASVTPAAFPTTAPNLVPTFDMSNFAATPIQPPPISTGVSVVTPVSLPGMPSIT 479
P ++S +S + A+ TT + P S T PP S+ TP++ P+ T
Sbjct: 86 PIITESTSSTSSAS--TTGSSSSPLPSTSTSCTTSTSIPPTGGSSSLSTPITPTVPPTST 143
Query: 480 VSATLPV---STIKKFTSNNHYTKSKT 551
S ++P+ ST T++N + T
Sbjct: 144 SSTSIPIPPTSTSSTDTNSNPLPTTST 170
Score = 29.1 bits (62), Expect = 0.64
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
Frame = +3
Query: 231 ASSTTAQSPGMPMNQPQPYIPMMPNYSQSQASVTPAAFPTTAPNLVPTFDMSN-----FA 395
+S+ T+ SP + + +P S VTP PT++ + T + + +
Sbjct: 377 SSTGTSSSPLLSTSTSCTTSTSIPPTGNSTTPVTPTVPPTSSSTPLTTTNCTTSTSVPYT 436
Query: 396 ATPIQPPPISTGVSVVTPVSLPGMPSITVSATLPVSTIKKFTSNN 530
+TP+ P++T + T S+P S V++T P++T TS +
Sbjct: 437 STPVTSTPLAT-TNCTTSTSVP-YTSTPVTST-PLTTTNCTTSTS 478
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 34.3 bits (75), Expect = 0.017
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = +3
Query: 228 AASSTTAQSPGMPMNQPQPYIPMMPNYSQ--SQASVTPAAF-PTTAPNLVPTFDMSNFAA 398
A + ++A +P P++Q P +P +P S S A P++ P TAP+ S+FA
Sbjct: 1469 APAPSSAPAPPAPVSQLPPAVPNVPVPSMIPSVAQQPPSSVAPATAPSSTLPPSQSSFAH 1528
Query: 399 TPIQPPPISTGVSVVTPVSLP 461
P PP S S P
Sbjct: 1529 VPSPAPPAPQHPSAAALSSAP 1549
Score = 29.9 bits (64), Expect = 0.37
Identities = 28/109 (25%), Positives = 42/109 (38%), Gaps = 1/109 (0%)
Frame = +3
Query: 186 NIDSTWKHTISI*YAASSTTAQSPGMPMNQPQPYIPMMPNYSQSQASVTPAAFPTTAPNL 365
N+ S T ++ AS T +PG P N +P P ++ + T AP
Sbjct: 1415 NVSSIEDETSTMPLKASQPT--NPGAPSNHAPQVVPPAPMHAVAPVQPKAPGMVTNAP-- 1470
Query: 366 VPTFDMSNFAATPIQPPPI-STGVSVVTPVSLPGMPSITVSATLPVSTI 509
P+ + A PP + + V + P PS AT P ST+
Sbjct: 1471 APSSAPAPPAPVSQLPPAVPNVPVPSMIPSVAQQPPSSVAPATAPSSTL 1519
Score = 25.8 bits (54), Expect = 6.0
Identities = 22/85 (25%), Positives = 33/85 (38%), Gaps = 4/85 (4%)
Frame = +3
Query: 255 PGMPMNQPQPYIPMMP----NYSQSQASVTPAAFPTTAPNLVPTFDMSNFAATPIQPPPI 422
P PM+ P P P N ++ P A + P VP + + + Q PP
Sbjct: 1448 PPAPMHAVAPVQPKAPGMVTNAPAPSSAPAPPAPVSQLPPAVPNVPVPSMIPSVAQQPPS 1507
Query: 423 STGVSVVTPVSLPGMPSITVSATLP 497
S + +LP PS + A +P
Sbjct: 1508 SVAPATAPSSTLP--PSQSSFAHVP 1530
Score = 25.8 bits (54), Expect = 6.0
Identities = 18/53 (33%), Positives = 23/53 (43%)
Frame = +3
Query: 339 AFPTTAPNLVPTFDMSNFAATPIQPPPISTGVSVVTPVSLPGMPSITVSATLP 497
A P + P + P + P PPP +SV P S P MP+ SA P
Sbjct: 1684 AHPVSTPPVRPQSAAPPQMSAPTPPPP---PMSVPPPPSAPPMPAGPPSAPPP 1733
>SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1752
Score = 33.1 bits (72), Expect = 0.039
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 4/114 (3%)
Frame = +3
Query: 225 YAASSTTAQSPGMPMNQPQPYIPMMPNYSQSQASVTPAAFPTTAPNLVPTFDMSNFAATP 404
Y+ SS + M Y P P+YS + S +P + P+ +P P++ ++ + +P
Sbjct: 1558 YSPSSPGYSTSPAYMPSSPSYSPTSPSYSPTSPSYSPTS-PSYSPT-SPSYSATSPSYSP 1615
Query: 405 IQP--PPISTGVSVVTPVSLPGMPSI--TVSATLPVSTIKKFTSNNHYTKSKTY 554
P P S S +P P PS T + P S TS ++ S +Y
Sbjct: 1616 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1669
>SPBC17D11.02c |||synoviolin homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 677
Score = 31.9 bits (69), Expect = 0.091
Identities = 24/83 (28%), Positives = 36/83 (43%)
Frame = +3
Query: 276 PQPYIPMMPNYSQSQASVTPAAFPTTAPNLVPTFDMSNFAATPIQPPPISTGVSVVTPVS 455
P P +P YSQS ++ P+A PTT T+ P + G++ + P
Sbjct: 444 PIPGTRRIPTYSQSTSTTNPSATPTTGDPSNSTYGGPQTFPNSGNNPNFNRGIAGIVP-- 501
Query: 456 LPGMPSITVSATLPVSTIKKFTS 524
PG ++ S T +ST TS
Sbjct: 502 -PGWRLVS-SNTQSLSTNSAMTS 522
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 31.1 bits (67), Expect = 0.16
Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +3
Query: 279 QPYIPMMPNYSQSQASVTPAAFPTTAPNLVPTFDMSNFAATPIQPPPISTGVSVVTPVS- 455
+P+ N ++Q +V FPTT PN F ++ + P S T VS
Sbjct: 243 RPHTQYQNNLLRAQPNVNCENFPTTVPNY--PFQQPSYNPNALVP-------SYTTLVSQ 293
Query: 456 LPGMPSITVSATLPVSTIKKFTSN 527
LP P +TVS+ P+ST SN
Sbjct: 294 LPPSPCLTVSSG-PLSTASSIPSN 316
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 30.7 bits (66), Expect = 0.21
Identities = 28/104 (26%), Positives = 43/104 (41%), Gaps = 10/104 (9%)
Frame = +3
Query: 228 AASSTTAQSPGMPMNQPQPYIPMMPNYSQSQASVTPAAFPTTAPNLVP----TFDMSNFA 395
+A +++P +P + P P P P S A P+A P P + P ++N +
Sbjct: 156 SAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTS 215
Query: 396 ATP--IQPP----PISTGVSVVTPVSLPGMPSITVSATLPVSTI 509
+ P PP P T S P P +PS +V P S +
Sbjct: 216 SRPSSFAPPAGHAPNVTSESPKFPNRGPSIPSASVPPVPPSSYV 259
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 30.7 bits (66), Expect = 0.21
Identities = 28/84 (33%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Frame = +3
Query: 255 PGMPMNQPQPYIPMMPNYSQSQASVTPAAFPTTAPNLVPTFDMSNFAATPI-QPPPISTG 431
P P + P P +P+ N S S P P +AP P +S A P+ + PP+
Sbjct: 963 PAAPPSIPPP-LPVS-NILSSPTSEPPKDHPPSAPLSKP---VSTSPAAPLARVPPVPKL 1017
Query: 432 VSVVTPVSLPGM--PSITVSATLP 497
S PV LP P I V +T P
Sbjct: 1018 SSKAPPVPLPSADAPPIPVPSTAP 1041
Score = 30.7 bits (66), Expect = 0.21
Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = +3
Query: 246 AQSPGMP-MNQPQPYIPMMPNYSQSQASVTPAAFPTTAPNLVPTFDMSNFAATPIQPPPI 422
A+ P +P ++ P +P+ P+ V A P P P S+ A P PPP+
Sbjct: 1009 ARVPPVPKLSSKAPPVPL-PSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGA-PSAPPPV 1066
Query: 423 STGVSVVTPVSLP-GMPSITVSATLP 497
S + + P G P + + +P
Sbjct: 1067 PAPSSEIPSIPAPSGAPPVPAPSGIP 1092
Score = 29.5 bits (63), Expect = 0.48
Identities = 29/104 (27%), Positives = 41/104 (39%)
Frame = +3
Query: 252 SPGMPMNQPQPYIPMMPNYSQSQASVTPAAFPTTAPNLVPTFDMSNFAATPIQPPPISTG 431
S P+ +P +P +P S + TP+A P VPT A + P +ST
Sbjct: 1195 SEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVP--VPTAKAPPVPAPSSEAPSVSTP 1252
Query: 432 VSVVTPVSLPGMPSITVSATLPVSTIKKFTSNNHYTKSKTYYHE 563
S V PS T S+ + + S +KSK HE
Sbjct: 1253 RSSVPSPHSNASPSPTSSSMASAAPARTSVSR---SKSKAERHE 1293
Score = 27.9 bits (59), Expect = 1.5
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 184 ATLTQLGSIPSVSSMQPPAPLPS 252
A L ++ +P +SS PP PLPS
Sbjct: 1006 APLARVPPVPKLSSKAPPVPLPS 1028
>SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1275
Score = 29.9 bits (64), Expect = 0.37
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 402 PIQPPPISTGVSVVTPVSLPGMPSITVSATLPVST 506
P+ P+S G S+V P+ P +PS S + P ST
Sbjct: 155 PLPETPVSPGGSLVHPLPRPPLPSSVSSHSSPYST 189
>SPBC23G7.08c |rga7||GTPase activating protein
Rga7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 29.1 bits (62), Expect = 0.64
Identities = 28/113 (24%), Positives = 43/113 (38%), Gaps = 8/113 (7%)
Frame = +3
Query: 210 TISI*YAASSTTAQSPGMPMNQPQPYI--PMMPNYSQSQASVTPAAFPTTAPNLVPTF-- 377
TI + A S + P P P + P PN S S S PA+ A L P+
Sbjct: 356 TIKVTAAIPSPLQNTNPAPSTFPNPSVASPAFPNSSTSNPSTAPASASPLASTLKPSTAN 415
Query: 378 ----DMSNFAATPIQPPPISTGVSVVTPVSLPGMPSITVSATLPVSTIKKFTS 524
S+ ++ P P+++ PV+ P + + P+ T TS
Sbjct: 416 DTNGSSSSSSSNPRTSSPLASNAENKPPVAQQS-PPVLLPTLPPIQTTTIQTS 467
>SPBC543.07 |pek1|skh1, mkk1|MAP kinase kinase Pek1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 363
Score = 29.1 bits (62), Expect = 0.64
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +1
Query: 25 NFPSPNKFNEQYLQYPQQNSIENIVE 102
N + N F+E+Y+ +P++N + IVE
Sbjct: 8 NLDTSNGFSEEYISHPERNDNQGIVE 33
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 29.1 bits (62), Expect = 0.64
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Frame = +3
Query: 315 SQASVTPAAF----PTTAPNLVPTFDMSNFAATP-IQPPPISTGVSVVTPVSLPGMPSIT 479
+ AS+T F PT N V +D +NF+ TP I P S S P SLP P +
Sbjct: 377 ADASLTTHVFDPISPTALSNSVLNYDSNNFSGTPQINVVPSSPSKSQSGP-SLPANPLLQ 435
Query: 480 VSATLPVS 503
++ S
Sbjct: 436 TDISITYS 443
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 28.7 bits (61), Expect = 0.85
Identities = 23/90 (25%), Positives = 33/90 (36%)
Frame = +3
Query: 264 PMNQPQPYIPMMPNYSQSQASVTPAAFPTTAPNLVPTFDMSNFAATPIQPPPISTGVSVV 443
P N + P Y SQ + PA P P PTFD N + P +
Sbjct: 345 PRNDDLLTLQQPPRYPHSQMVMLPARSPVEVP--APTFDRRNVSRNSNNNSPEGYDNNRT 402
Query: 444 TPVSLPGMPSITVSATLPVSTIKKFTSNNH 533
P ++ +PS + P IK ++ H
Sbjct: 403 NP-TVNNLPSYPTNLARP-KAIKPMPTSIH 430
>SPBC3B8.03 |||saccharopine dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 450
Score = 28.7 bits (61), Expect = 0.85
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -2
Query: 360 LVQL*GKQL-ESQKPETDYNLASLVCMAEADSSAYQETGQ 244
LV++ GK L E+ KP Y + VC DS+ YQE Q
Sbjct: 194 LVEIDGKDLMETAKPYFIYPGYAFVCYPNRDSTVYQERYQ 233
>SPBC887.10 |mcs4||two-component response regulator
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 522
Score = 28.7 bits (61), Expect = 0.85
Identities = 20/59 (33%), Positives = 27/59 (45%)
Frame = +3
Query: 309 SQSQASVTPAAFPTTAPNLVPTFDMSNFAATPIQPPPISTGVSVVTPVSLPGMPSITVS 485
S S TP F PN++PT +N I+ P I+ S+ +PVS P T S
Sbjct: 110 SSSTFESTPPVFSEYPPNIIPT--PANETVPRIKQPSIALD-SLESPVSAPSRHQSTYS 165
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 28.3 bits (60), Expect = 1.1
Identities = 24/90 (26%), Positives = 38/90 (42%)
Frame = +3
Query: 228 AASSTTAQSPGMPMNQPQPYIPMMPNYSQSQASVTPAAFPTTAPNLVPTFDMSNFAATPI 407
A S+ A P +P + P +P + N S++ P T P+L P+ A P
Sbjct: 384 AVSNPPAPPPAIP-GRSAPALPPLGNASRTSTPPVP-----TPPSLPPS-------APPS 430
Query: 408 QPPPISTGVSVVTPVSLPGMPSITVSATLP 497
PP + + P + P PS ++ LP
Sbjct: 431 LPPSAPPSLPMGAPAAPPLPPSAPIAPPLP 460
Score = 25.8 bits (54), Expect = 6.0
Identities = 22/93 (23%), Positives = 38/93 (40%)
Frame = +3
Query: 228 AASSTTAQSPGMPMNQPQPYIPMMPNYSQSQASVTPAAFPTTAPNLVPTFDMSNFAATPI 407
+++S+ P P + IP+ P + P + P+T P + P
Sbjct: 331 SSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPA 390
Query: 408 QPPPISTGVSVVTPVSLPGMPSITVSATLPVST 506
PPP G S +LP + + + ++T PV T
Sbjct: 391 -PPPAIPGRSA---PALPPLGNASRTSTPPVPT 419
>SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 658
Score = 27.9 bits (59), Expect = 1.5
Identities = 17/61 (27%), Positives = 25/61 (40%)
Frame = +3
Query: 318 QASVTPAAFPTTAPNLVPTFDMSNFAATPIQPPPISTGVSVVTPVSLPGMPSITVSATLP 497
+A +TP TT P T + TP+ I+ V T + M + TV T P
Sbjct: 252 EAMITPTVETTTLPTAAMTTPVEETTTTPMVETMITPTVVTTTTPMVETMITPTVVTTTP 311
Query: 498 V 500
+
Sbjct: 312 M 312
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 27.9 bits (59), Expect = 1.5
Identities = 20/61 (32%), Positives = 28/61 (45%)
Frame = +3
Query: 315 SQASVTPAAFPTTAPNLVPTFDMSNFAATPIQPPPISTGVSVVTPVSLPGMPSITVSATL 494
S V PA T A + + TF + P PPP + S VTP++ P + + VS
Sbjct: 186 SSPHVRPAVGATMAGSAMRTFPSNLPLGHP--PPPSDSANSSVTPIAAPLVVNGKVSGNP 243
Query: 495 P 497
P
Sbjct: 244 P 244
>SPBP16F5.08c |||flavin dependent monooxygenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 447
Score = 27.9 bits (59), Expect = 1.5
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 303 NYSQSQASVTPAAFPTTAPNLVPTFDMSNFAATPIQPPPISTGVSVVTPVSLPG 464
NY+ + ++ P P+T P ++ T + AA P+ P P+ + TP+ L G
Sbjct: 48 NYTSTLSNKLPV--PSTNP-ILTTEPIVGPAALPVYPSPLYRDLQTNTPIELMG 98
>SPAC1A6.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 636
Score = 27.5 bits (58), Expect = 2.0
Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 3/85 (3%)
Frame = +3
Query: 225 YAASSTTAQSPGMPMNQPQPYIPMMPNYSQSQASVTPAAFPTTAPNLVPTFDMSNFA--A 398
Y + QS P P+ MP+ + S A +PAA ++ +VP + A
Sbjct: 148 YNSEEVNFQSYQDPRLLPRTSQMYMPDNNYSPAVKSPAAQRRSSSYMVPANSRGSPANYN 207
Query: 399 TPIQPPPISTGVSVVTP-VSLPGMP 470
TP P I + +P VSLP P
Sbjct: 208 TPYYPTAIPPPIEEYSPSVSLPTSP 232
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 27.5 bits (58), Expect = 2.0
Identities = 23/81 (28%), Positives = 35/81 (43%)
Frame = +3
Query: 279 QPYIPMMPNYSQSQASVTPAAFPTTAPNLVPTFDMSNFAATPIQPPPISTGVSVVTPVSL 458
+P +P+ S SVTP P + L P + P QPPP+ST + + VS
Sbjct: 1034 EPPTVSVPSPSALSPSVTPQ-LPPVSSRLPPV--SATRPQIP-QPPPVSTALPSSSAVSR 1089
Query: 459 PGMPSITVSATLPVSTIKKFT 521
P + + ++ ST T
Sbjct: 1090 PPIATSAGRSSTAASTSAPLT 1110
Score = 25.4 bits (53), Expect = 7.9
Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 5/81 (6%)
Frame = +3
Query: 234 SSTTAQSPGMPMNQPQPYIPMMPNYSQSQASVTPAAFPTTAPNLVPTFDMSNFAATPIQP 413
+S T P + P PY P+ P Q+ V A+ +++PN+ P+ + A
Sbjct: 940 ASGTRVPPVQQPSHPNPYTPVAP-----QSPVAAASRISSSPNMPPSNPYTPIAVASSTV 994
Query: 414 PPIST-----GVSVVTPVSLP 461
P T G +V P P
Sbjct: 995 NPAHTYKPHGGSQIVPPPKQP 1015
>SPAC3G9.14 |sak1||transcriptional repressor
Sak1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 766
Score = 27.1 bits (57), Expect = 2.6
Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Frame = +3
Query: 234 SSTTAQSPGMPMNQPQPYIPMMPNYSQSQASVTPAAFPTTAP-NLVPTFDMSNFAATPIQ 410
SS + +P ++QP + MP +S S T + PT P + F++ + ++
Sbjct: 292 SSVPSPAPPRSVSQPTYFSQPMPQFSSSFVPGTSSIVPTLHPASAQEDFNLQHSLFFKLK 351
Query: 411 PPPISTGVSVVTPVSLPGMPSITVSA-TLP 497
+ + P LP +PS+ VS+ +LP
Sbjct: 352 -------LKFLPPHKLPWIPSLDVSSFSLP 374
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.1 bits (57), Expect = 2.6
Identities = 24/102 (23%), Positives = 35/102 (34%), Gaps = 1/102 (0%)
Frame = +3
Query: 276 PQPYIPMMPNYSQSQASVTPAAFPT-TAPNLVPTFDMSNFAATPIQPPPISTGVSVVTPV 452
P P P P + + P+ NL ++ ATP QPP T S +
Sbjct: 236 PAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPPRPPTNASTRSTG 295
Query: 453 SLPGMPSITVSATLPVSTIKKFTSNNHYTKSKTYYHEKLLVY 578
+ M S P S + N + K +T H+ Y
Sbjct: 296 TSSSMAHSYDSPPSPSSPSDAYGDPNQHLKLRTDSHDDSRAY 337
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 26.6 bits (56), Expect = 3.4
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
Frame = +3
Query: 237 STTAQSPGM-PMNQPQPYIPMMPNYSQSQASVTPAAFPTTAPNLVPTFDMSNFAATP--- 404
ST + SP P+ P + S S S P+ ++ ++ T +++ A +
Sbjct: 157 STLSMSPSSTPVFSPSASVSSKVASSVSYVSSEPSDSSSSTNTVILTTSVNSPAVSSSET 216
Query: 405 IQPPPISTGVSVVTPVSLPGMPSITVSATLPVST 506
+ I++ S T S+ S T S+TLPVST
Sbjct: 217 LTSVSITSTESAYTSSSVDIAASTTASSTLPVST 250
>SPBC725.16 |res1|sct1|MBF transcription factor complex subunit
Res1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 637
Score = 26.6 bits (56), Expect = 3.4
Identities = 22/100 (22%), Positives = 42/100 (42%), Gaps = 1/100 (1%)
Frame = +3
Query: 261 MPMNQPQPYIPMMPNYSQSQASVTPAAFPTTAPNLVPTFDMSNFAATPIQPPPISTGVSV 440
MPM+ P P + + S +F + +L+ + SN + + I +S+
Sbjct: 109 MPMSTFTPQSNRKPTEAYRRNSPVKKSFSRPSHSLLYPYTSSNNMTSTSRMSGIHDALSL 168
Query: 441 VTPVSL-PGMPSITVSATLPVSTIKKFTSNNHYTKSKTYY 557
+ + P MPS + + +L F+SNN+ Y+
Sbjct: 169 QSDFTRSPDMPSDSFTGSLHDIKASPFSSNNYAQSLLDYF 208
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 26.6 bits (56), Expect = 3.4
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +3
Query: 300 PNYSQSQASVTPAAFPTT-APNLVPTFDMSNFAATPIQPPPISTGVSVVTPVSLPGMPS 473
P+YS S A TPAA ++ AP P + QP P G P P P+
Sbjct: 64 PSYSNSAAPATPAASASSAAPAPAPAASQNRAYGAAPQPYPPQGGYP-QQPYYYPNQPN 121
>SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 637
Score = 26.6 bits (56), Expect = 3.4
Identities = 12/50 (24%), Positives = 21/50 (42%)
Frame = +3
Query: 240 TTAQSPGMPMNQPQPYIPMMPNYSQSQASVTPAAFPTTAPNLVPTFDMSN 389
T+ + +QP +P S S +P PNL+PT ++ +
Sbjct: 439 TSVNPHSLSPSQPPVVVPSNTTISSSPPLTSPVKTSANIPNLLPTSELDS 488
>SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 628
Score = 26.6 bits (56), Expect = 3.4
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 453 SLPGMPSITVSATLPVSTIKKFTSNNHYTKSKTYYH 560
+LP PSI+ S T+K F+S N T + H
Sbjct: 5 TLPPKPSISPSIASSFPTVKPFSSQNSTTSNPELSH 40
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 26.6 bits (56), Expect = 3.4
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = +3
Query: 327 VTPAAFPTTAPNLVPTFDMSNFAATPIQPPPISTGVSVVTPVSLP 461
+ +A P PNL P F + + PP S+ S V++P
Sbjct: 29 IEDSASPRLTPNLPPPFSVHQLQSFVPPQPPSSSSPSTTGTVAVP 73
Score = 26.2 bits (55), Expect = 4.5
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +2
Query: 110 PNSHHPPLHS 139
P+SHHPPLH+
Sbjct: 134 PHSHHPPLHN 143
>SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 613
Score = 25.8 bits (54), Expect = 6.0
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Frame = +3
Query: 234 SSTTAQSPGMPMNQPQPYIPMMP-NYSQSQASVTPAAFPTTAPNLVPTFD--MSNFAATP 404
SS T+Q N P P I NY + ++V F + PN+ TFD +++F T
Sbjct: 248 SSITSQEWYRNANFPYPIITFATQNYGEDISNVNTTFFEAS-PNVFGTFDHGINSFIPTE 306
Query: 405 IQPPPISTGVS 437
++ G S
Sbjct: 307 YLGTTLNNGAS 317
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 25.8 bits (54), Expect = 6.0
Identities = 21/89 (23%), Positives = 34/89 (38%)
Frame = +3
Query: 288 IPMMPNYSQSQASVTPAAFPTTAPNLVPTFDMSNFAATPIQPPPISTGVSVVTPVSLPGM 467
IP+ PN S +S +PTT P+ P P P S G S + G
Sbjct: 304 IPVSPNIPVSPSSSFVPMYPTTFPSSKP-----QIVNAPPAPSYFSPGSSFGAQLCANGS 358
Query: 468 PSITVSATLPVSTIKKFTSNNHYTKSKTY 554
+ + K T++N + ++T+
Sbjct: 359 TLLRADTKQYGLALPKITNSNLISPNQTF 387
>SPCC70.10 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 155
Score = 25.8 bits (54), Expect = 6.0
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +3
Query: 234 SSTTAQSPGMPMNQPQPYIPMMPNYSQSQASVTPAA 341
++TT S +P P PY P + Q +PAA
Sbjct: 97 NTTTTVSENLPEEVPPPYSPAATASNTPQNEASPAA 132
>SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 964
Score = 25.8 bits (54), Expect = 6.0
Identities = 23/59 (38%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +3
Query: 381 MSNFAATPIQPPPIST-GVSVVTP-VSLPGMPSITVSATLPVSTIKKFTSNNHYTKSKT 551
MSN A+ QP P ST S V P SLP PS+ + TI K T + +KT
Sbjct: 198 MSNLQAS--QPVPSSTFSRSAVVPNPSLPLNPSVLQGQVMNNPTIPKGTPSTSIEGAKT 254
>SPBC146.09c |lsd1|swm1, saf110|histone demethylase
SWIRM1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1000
Score = 22.6 bits (46), Expect(2) = 7.2
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +3
Query: 660 MLDSLIGNVLVPN 698
+L SLIGNV++PN
Sbjct: 754 VLASLIGNVVLPN 766
Score = 21.0 bits (42), Expect(2) = 7.2
Identities = 11/36 (30%), Positives = 15/36 (41%)
Frame = +3
Query: 495 PVSTIKKFTSNNHYTKSKTYYHEKLLVYLCYVF*AE 602
P+ TI NN YT +Y L + Y +E
Sbjct: 684 PIRTIISNWENNSYTNHSSYQISNLFLEEDYAILSE 719
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 25.4 bits (53), Expect = 7.9
Identities = 11/38 (28%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 369 PTFDMSNF-AATPIQPPPISTGVSVVTPVSLPGMPSIT 479
P SN + TP+ PP++ G + V+ P +P ++
Sbjct: 180 PAISTSNLPSTTPLYIPPVNYGANQVSQQPNPQLPGVS 217
Score = 25.4 bits (53), Expect = 7.9
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 9/70 (12%)
Frame = +3
Query: 273 QPQPYIPMMPNY------SQSQASVTPAAFPTTA-PNLVPTFDMSNFAATPIQPPPIS-- 425
QP P +P + NY S+ +V P PT A P+ P+ S A + Q P
Sbjct: 208 QPNPQLPGVSNYYNPSATSKPAVNVQPPRIPTKATPSAEPSMTASANAGSISQAGPDGEY 267
Query: 426 TGVSVVTPVS 455
G + PVS
Sbjct: 268 QGREQIAPVS 277
>SPBC582.10c |||ATP-dependent DNA helicase Rhp16b
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 830
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 326 RSLRLTIIWHHWYVWLRLIHRHTRRLGSG 240
R LR TII+ + +L +I H R+ G G
Sbjct: 668 RGLRKTIIFSQFTTFLDIIDLHLRKAGIG 696
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,935,838
Number of Sequences: 5004
Number of extensions: 60988
Number of successful extensions: 338
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 330
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 323158234
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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