Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20138
         (666 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   6.9  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   6.9  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   9.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   9.1  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   9.1  

>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 13/54 (24%), Positives = 20/54 (37%)
 Frame = -2

Query: 629 LKRSSIYFKLLEGSHIICDKLQNHRVLFKLRPM*RYTINNKYKIQSIVTYILTN 468
           L   S+        H I D+L +H  +         TI+N Y+    + Y   N
Sbjct: 165 LSPQSVASTASSADHQIVDRLLSHAPIDSANQWYSQTIDNSYQFCDNLQYSFDN 218


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 13/54 (24%), Positives = 20/54 (37%)
 Frame = -2

Query: 629 LKRSSIYFKLLEGSHIICDKLQNHRVLFKLRPM*RYTINNKYKIQSIVTYILTN 468
           L   S+        H I D+L +H  +         TI+N Y+    + Y   N
Sbjct: 156 LSPQSVASTASSADHQIVDRLLSHAPIDSANQWYSQTIDNSYQFCDNLQYSFDN 209


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +2

Query: 17  LCMNLMPDFFYLSY 58
           LC+     FFYLSY
Sbjct: 80  LCLPFYSYFFYLSY 93


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = -1

Query: 489 CNLYTY**YIMYL*QITILCIVIFLMTLD*STYKIIL 379
           C  Y Y  +I++   +   C++I L+ +    Y  IL
Sbjct: 211 CIYYFYSAFIIFTIHLLFYCVLIILLCIYYFYYAFIL 247


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory
          receptor candidate 14 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +2

Query: 17 LCMNLMPDFFYLSY 58
          LC+     FFYLSY
Sbjct: 36 LCLPFYSYFFYLSY 49


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,027
Number of Sequences: 336
Number of extensions: 2985
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)