Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20137
         (641 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    24   1.2  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    22   3.7  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   8.6  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   8.6  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   8.6  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   8.6  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   8.6  

>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -1

Query: 338 NNFKNEYYPVELKSIIESKSTLFFYFLLIADEVTIQLRLF 219
           N FKN Y+ + L   + S S  +  ++ IA +    L+LF
Sbjct: 128 NLFKNAYFQLVLSISVYSSSVGYTQYVRIAAKGLPTLKLF 167


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 282 FRFYYTF*LDRVIFIFK 332
           F+FYYT+ L  ++ IF+
Sbjct: 154 FQFYYTYFLCVIVCIFR 170


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 311 VELKSIIESKSTLFFYFL 258
           V+ KS+I S S   F+F+
Sbjct: 205 VDFKSVIRSISVFSFFFM 222


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -1

Query: 167 WLLEPIDIYNVNAPPTLRYK 108
           WL  P  + N   P +LR+K
Sbjct: 7   WLTPPHSLGNTVTPVSLRFK 26


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -1

Query: 260 LLIADEVTIQLRLFFFIA*MSGRA 189
           LLI+ +V   + LF FI   SG A
Sbjct: 152 LLISQDVIANVLLFIFIVVKSGVA 175


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -1

Query: 359 IQ*PHLLNNFKNEYYPVELKSIIES 285
           +Q  H+L N     YP EL +I+ S
Sbjct: 88  VQKKHILKNVFGVAYPGELLAILGS 112


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -1

Query: 359 IQ*PHLLNNFKNEYYPVELKSIIES 285
           +Q  H+L N     YP EL +I+ S
Sbjct: 88  VQKKHILKNVFGVAYPGELLAILGS 112


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,904
Number of Sequences: 336
Number of extensions: 2374
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)