Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20137
         (641 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-922|AAZ52496.1|  175|Drosophila melanogaster CG3192-PB,...    29   5.4  
AE014298-921|AAF46185.1|  175|Drosophila melanogaster CG3192-PA,...    29   5.4  

>AE014298-922|AAZ52496.1|  175|Drosophila melanogaster CG3192-PB,
           isoform B protein.
          Length = 175

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 10/29 (34%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = -3

Query: 264 FPAHSRRSHDPVEAVF-FYCLDEWTSSQP 181
           +P H R  H+P+ A    Y  D W+ ++P
Sbjct: 95  YPEHKRNQHEPISADHDLYSEDRWSQAEP 123


>AE014298-921|AAF46185.1|  175|Drosophila melanogaster CG3192-PA,
           isoform A protein.
          Length = 175

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 10/29 (34%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = -3

Query: 264 FPAHSRRSHDPVEAVF-FYCLDEWTSSQP 181
           +P H R  H+P+ A    Y  D W+ ++P
Sbjct: 95  YPEHKRNQHEPISADHDLYSEDRWSQAEP 123


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,291,243
Number of Sequences: 53049
Number of extensions: 360509
Number of successful extensions: 686
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 686
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)